RNA–Protein interactions for RNA: ENST00000306052.10

LRP8-201, Transcript of LDL receptor related protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRP8, Length 7,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-201ENST00000306052 MIER1Q8N108 512 aa19.67■□□□□ 0.74
LRP8-201ENST00000306052 SENP3Q9H4L4 574 aaPredicted RBP19.66■□□□□ 0.74
LRP8-201ENST00000306052 HNRNPUQ00839 825 aaKnown RBP eCLIP19.66■□□□□ 0.74
LRP8-201ENST00000306052 MROH2BQ7Z745 1585 aa19.62■□□□□ 0.73
LRP8-201ENST00000306052 EIF4G1Q04637 1599 aaKnown RBP19.62■□□□□ 0.73
LRP8-201ENST00000306052 IRX6P78412 446 aaPredicted RBP19.61■□□□□ 0.73
LRP8-201ENST00000306052 DDX10Q13206 875 aaKnown RBP19.59■□□□□ 0.73
LRP8-201ENST00000306052 SALL2Q9Y467 1007 aaPredicted RBP19.59■□□□□ 0.73
LRP8-201ENST00000306052 CLIP1P30622 1438 aa19.58■□□□□ 0.72
LRP8-201ENST00000306052 FAM9BQ8IZU0 186 aa19.55■□□□□ 0.72
LRP8-201ENST00000306052 CUX2O14529 1486 aa19.55■□□□□ 0.72
LRP8-201ENST00000306052 UPF2Q9HAU5 1272 aaKnown RBP19.54■□□□□ 0.72
LRP8-201ENST00000306052 CCDC136Q96JN2 1154 aa19.53■□□□□ 0.72
LRP8-201ENST00000306052 RTN4Q9NQC3 1192 aaKnown RBP19.52■□□□□ 0.71
LRP8-201ENST00000306052 CCDC88BA6NC98 1476 aa19.51■□□□□ 0.71
LRP8-201ENST00000306052 CDK11BP21127 795 aaKnown RBP19.51■□□□□ 0.71
LRP8-201ENST00000306052 GOLGA3Q08378 1498 aa19.5■□□□□ 0.71
LRP8-201ENST00000306052 PPP1R15AO75807 674 aaPredicted RBP19.49■□□□□ 0.71
LRP8-201ENST00000306052 WIZO95785 1651 aa19.48■□□□□ 0.71
LRP8-201ENST00000306052 RRP7BPQ9NSQ0 103 aa19.47■□□□□ 0.71
LRP8-201ENST00000306052 CFDP1Q9UEE9 299 aaPredicted RBP19.47■□□□□ 0.71
LRP8-201ENST00000306052 KDM2AQ9Y2K7 1162 aa19.47■□□□□ 0.71
LRP8-201ENST00000306052 SOGA1O94964 1423 aa19.47■□□□□ 0.71
LRP8-201ENST00000306052 EEA1Q15075 1411 aa19.47■□□□□ 0.71
LRP8-201ENST00000306052 A0A0G2JS52 829 aa19.46■□□□□ 0.71
LRP8-201ENST00000306052 C14orf37Q86TY3 774 aa19.46■□□□□ 0.71
LRP8-201ENST00000306052 TDRD9Q8NDG6 1382 aaKnown RBP19.45■□□□□ 0.7
LRP8-201ENST00000306052 PLEKHG5O94827 1062 aa19.45■□□□□ 0.7
LRP8-201ENST00000306052 MYO15BQ96JP2 1530 aa19.44■□□□□ 0.7
LRP8-201ENST00000306052 TULP1O00294 542 aaPredicted RBP19.44■□□□□ 0.7
LRP8-201ENST00000306052 CARMIL1Q5VZK9 1371 aa19.43■□□□□ 0.7
LRP8-201ENST00000306052 TONSLQ96HA7 1378 aa19.43■□□□□ 0.7
LRP8-201ENST00000306052 CADPSQ9ULU8 1353 aa19.4■□□□□ 0.7
LRP8-201ENST00000306052 MLECQ14165 292 aa19.39■□□□□ 0.69
LRP8-201ENST00000306052 CEP164Q9UPV0 1460 aa19.38■□□□□ 0.69
LRP8-201ENST00000306052 ATAD2BQ9ULI0 1458 aa19.36■□□□□ 0.69
LRP8-201ENST00000306052 ABCC8Q09428 1581 aa19.34■□□□□ 0.69
LRP8-201ENST00000306052 TPRNQ4KMQ1 711 aa19.34■□□□□ 0.69
LRP8-201ENST00000306052 SMARCA4P51532 1647 aa19.33■□□□□ 0.69
LRP8-201ENST00000306052 CEP162Q5TB80 1403 aa19.33■□□□□ 0.68
LRP8-201ENST00000306052 TOP2AP11388 1531 aaKnown RBP19.31■□□□□ 0.68
LRP8-201ENST00000306052 ZBTB7CA1YPR0 619 aa19.3■□□□□ 0.68
LRP8-201ENST00000306052 CARMIL2Q6F5E8 1435 aa19.29■□□□□ 0.68
LRP8-201ENST00000306052 SUPT16HQ9Y5B9 1047 aaKnown RBP19.28■□□□□ 0.68
LRP8-201ENST00000306052 RGL3Q3MIN7 710 aa19.28■□□□□ 0.68
LRP8-201ENST00000306052 HIRIP3Q9BW71 556 aaPredicted RBP19.28■□□□□ 0.68
LRP8-201ENST00000306052 FANCD2Q9BXW9 1451 aa19.23■□□□□ 0.67
LRP8-201ENST00000306052 DDRGK1Q96HY6 314 aa19.22■□□□□ 0.67
LRP8-201ENST00000306052 CYB5RLQ6IPT4 315 aa19.22■□□□□ 0.67
LRP8-201ENST00000306052 TRIM44Q96DX7 344 aaPredicted RBP19.22■□□□□ 0.67
LRP8-201ENST00000306052 MRS2Q9HD23 443 aa19.22■□□□□ 0.67
LRP8-201ENST00000306052 HAP1P54257 671 aaPredicted RBP19.22■□□□□ 0.67
LRP8-201ENST00000306052 CCNB3Q8WWL7 1395 aa19.22■□□□□ 0.67
LRP8-201ENST00000306052 DEKP35659 375 aaKnown RBP19.21■□□□□ 0.67
LRP8-201ENST00000306052 NAP1L5Q96NT1 182 aaPredicted RBP19.21■□□□□ 0.67
LRP8-201ENST00000306052 LAS1LQ9Y4W2 734 aaKnown RBP19.21■□□□□ 0.67
LRP8-201ENST00000306052 TMC1Q8TDI8 760 aa19.2■□□□□ 0.66
LRP8-201ENST00000306052 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.19■□□□□ 0.66
LRP8-201ENST00000306052 OSCARQ8IYS5 282 aa19.19■□□□□ 0.66
LRP8-201ENST00000306052 NOP58Q9Y2X3 529 aaKnown RBP19.18■□□□□ 0.66
LRP8-201ENST00000306052 TAOK2Q9UL54 1235 aa19.17■□□□□ 0.66
LRP8-201ENST00000306052 TNIKQ9UKE5 1360 aa19.16■□□□□ 0.66
LRP8-201ENST00000306052 NCBP3Q53F19 620 aaKnown RBP19.15■□□□□ 0.66
LRP8-201ENST00000306052 FHAD1B1AJZ9 1412 aa19.14■□□□□ 0.66
LRP8-201ENST00000306052 NCLP19338 710 aaKnown RBP19.14■□□□□ 0.65
LRP8-201ENST00000306052 ERICH6BQ5W0A0 696 aa19.12■□□□□ 0.65
LRP8-201ENST00000306052 GGT6Q6P531 493 aa19.12■□□□□ 0.65
LRP8-201ENST00000306052 WDR43Q15061 677 aaKnown RBP eCLIP19.11■□□□□ 0.65
LRP8-201ENST00000306052 MYH16Q9H6N6 1097 aa19.11■□□□□ 0.65
LRP8-201ENST00000306052 TNNT2P45379 298 aaPredicted RBP19.11■□□□□ 0.65
LRP8-201ENST00000306052 DNTTIP2Q5QJE6 756 aaKnown RBP19.11■□□□□ 0.65
LRP8-201ENST00000306052 JPH4Q96JJ6 628 aa19.1■□□□□ 0.65
LRP8-201ENST00000306052 BECN1Q14457 450 aa19.08■□□□□ 0.65
LRP8-201ENST00000306052 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.08■□□□□ 0.65
LRP8-201ENST00000306052 LMOD2Q6P5Q4 547 aa19.08■□□□□ 0.64
LRP8-201ENST00000306052 AMER1Q5JTC6 1135 aaPredicted RBP19.08■□□□□ 0.64
LRP8-201ENST00000306052 SENP3-EIF4A1A0A087X0R7 540 aa19.08■□□□□ 0.64
LRP8-201ENST00000306052 PPM1GO15355 546 aaPredicted RBP19.07■□□□□ 0.64
LRP8-201ENST00000306052 PTMAP06454 111 aaKnown RBP19.06■□□□□ 0.64
LRP8-201ENST00000306052 RBM19Q9Y4C8 960 aaKnown RBP19.06■□□□□ 0.64
LRP8-201ENST00000306052 KANK1Q14678 1352 aa19.05■□□□□ 0.64
LRP8-201ENST00000306052 CC2D2AQ9P2K1 1620 aa19.05■□□□□ 0.64
LRP8-201ENST00000306052 ZRSR1Q15695 479 aaKnown RBP19.01■□□□□ 0.63
LRP8-201ENST00000306052 POGKQ9P215 609 aa19.01■□□□□ 0.63
LRP8-201ENST00000306052 EFCAB2Q5VUJ9 269 aa19■□□□□ 0.63
LRP8-201ENST00000306052 PPP4R2Q9NY27 417 aa18.98■□□□□ 0.63
LRP8-201ENST00000306052 HDGFP51858 240 aaKnown RBP18.96■□□□□ 0.63
LRP8-201ENST00000306052 PLCB2Q00722 1185 aa18.96■□□□□ 0.63
LRP8-201ENST00000306052 B4GALNT3Q6L9W6 998 aa18.96■□□□□ 0.63
LRP8-201ENST00000306052 RAPGEF2Q9Y4G8 1499 aa18.95■□□□□ 0.62
LRP8-201ENST00000306052 GOLGA6L22H0YM25 854 aa18.92■□□□□ 0.62
LRP8-201ENST00000306052 NCAPD3P42695 1498 aa18.91■□□□□ 0.62
LRP8-201ENST00000306052 FMN1Q68DA7 1419 aa18.91■□□□□ 0.62
LRP8-201ENST00000306052 EIF4G2P78344 907 aaKnown RBP eCLIP18.9■□□□□ 0.624e-7■■■■□ 23.1
LRP8-201ENST00000306052 AEBP2Q6ZN18 517 aaPredicted RBP18.9■□□□□ 0.62
LRP8-201ENST00000306052 TSHZ2Q9NRE2 1034 aa18.9■□□□□ 0.62
LRP8-201ENST00000306052 RAD54L2Q9Y4B4 1467 aa18.89■□□□□ 0.61
LRP8-201ENST00000306052 GAPVD1Q14C86 1478 aa18.88■□□□□ 0.61
LRP8-201ENST00000306052 HNRNPMP52272 730 aaKnown RBP eCLIP18.88■□□□□ 0.61
LRP8-201ENST00000306052 FHOD3Q2V2M9 1422 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms