RNA–Protein interactions for RNA: ENST00000305921.7

PPM1D-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1D, Length 4,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1D-201ENST00000305921 MIER1Q8N108 512 aa22.23■■□□□ 1.15
PPM1D-201ENST00000305921 SALL2Q9Y467 1007 aaPredicted RBP22.23■■□□□ 1.15
PPM1D-201ENST00000305921 HIRIP3Q9BW71 556 aaPredicted RBP22.22■■□□□ 1.15
PPM1D-201ENST00000305921 KCNH8Q96L42 1107 aa22.21■■□□□ 1.15
PPM1D-201ENST00000305921 CFDP1Q9UEE9 299 aaPredicted RBP22.18■■□□□ 1.14
PPM1D-201ENST00000305921 PLPPR3Q6T4P5 718 aa22.17■■□□□ 1.14
PPM1D-201ENST00000305921 WDR43Q15061 677 aaKnown RBP eCLIP22.16■■□□□ 1.14
PPM1D-201ENST00000305921 NPM2Q86SE8 214 aaKnown RBP22.16■■□□□ 1.14
PPM1D-201ENST00000305921 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.1■■□□□ 1.13
PPM1D-201ENST00000305921 CCDC136Q96JN2 1154 aa22.1■■□□□ 1.13
PPM1D-201ENST00000305921 SOGA1O94964 1423 aa22.08■■□□□ 1.12
PPM1D-201ENST00000305921 CARMIL1Q5VZK9 1371 aa22.06■■□□□ 1.12
PPM1D-201ENST00000305921 FHAD1B1AJZ9 1412 aa22.06■■□□□ 1.12
PPM1D-201ENST00000305921 MROH2BQ7Z745 1585 aa22.05■■□□□ 1.12
PPM1D-201ENST00000305921 RGL3Q3MIN7 710 aa22.05■■□□□ 1.12
PPM1D-201ENST00000305921 UPF2Q9HAU5 1272 aaKnown RBP22.04■■□□□ 1.12
PPM1D-201ENST00000305921 CUX2O14529 1486 aa22.04■■□□□ 1.12
PPM1D-201ENST00000305921 ERCC6Q03468 1493 aa22■■□□□ 1.11
PPM1D-201ENST00000305921 CCDC88BA6NC98 1476 aa21.99■■□□□ 1.11
PPM1D-201ENST00000305921 CCNB3Q8WWL7 1395 aa21.99■■□□□ 1.11
PPM1D-201ENST00000305921 HSP90AA1P07900 732 aaKnown RBP21.94■■□□□ 1.1
PPM1D-201ENST00000305921 SIN3AQ96ST3 1273 aa21.93■■□□□ 1.1
PPM1D-201ENST00000305921 PPP1R15AO75807 674 aaPredicted RBP21.93■■□□□ 1.1
PPM1D-201ENST00000305921 CDCA8Q53HL2 280 aa21.93■■□□□ 1.1
PPM1D-201ENST00000305921 CARD11Q9BXL7 1154 aa21.92■■□□□ 1.1
PPM1D-201ENST00000305921 SCAF1Q9H7N4 1312 aaKnown RBP21.9■■□□□ 1.1
PPM1D-201ENST00000305921 VPS8Q8N3P4 1428 aa21.89■■□□□ 1.1
PPM1D-201ENST00000305921 IRX6P78412 446 aaPredicted RBP21.89■■□□□ 1.1
PPM1D-201ENST00000305921 SMARCA2P51531 1590 aa21.89■■□□□ 1.09
PPM1D-201ENST00000305921 ABCC8Q09428 1581 aa21.85■■□□□ 1.09
PPM1D-201ENST00000305921 KNSTRNQ9Y448 316 aa21.84■■□□□ 1.09
PPM1D-201ENST00000305921 SENP3Q9H4L4 574 aaPredicted RBP21.84■■□□□ 1.09
PPM1D-201ENST00000305921 TIMELESSQ9UNS1 1208 aa21.83■■□□□ 1.08
PPM1D-201ENST00000305921 EIF4G1Q04637 1599 aaKnown RBP21.82■■□□□ 1.08
PPM1D-201ENST00000305921 CFAP53Q96M91 514 aa21.79■■□□□ 1.08
PPM1D-201ENST00000305921 PDS5BQ9NTI5 1447 aa21.76■■□□□ 1.07
PPM1D-201ENST00000305921 ANP32BQ92688 251 aaKnown RBP21.75■■□□□ 1.07
PPM1D-201ENST00000305921 MYH16Q9H6N6 1097 aa21.74■■□□□ 1.07
PPM1D-201ENST00000305921 KANK4Q5T7N3 995 aaPredicted RBP21.74■■□□□ 1.07
PPM1D-201ENST00000305921 TOP2AP11388 1531 aaKnown RBP21.73■■□□□ 1.07
PPM1D-201ENST00000305921 ARID4BQ4LE39 1312 aaPredicted RBP21.72■■□□□ 1.07
PPM1D-201ENST00000305921 SETD5Q9C0A6 1442 aa21.72■■□□□ 1.07
PPM1D-201ENST00000305921 ARHGAP35Q9NRY4 1499 aa21.71■■□□□ 1.07
PPM1D-201ENST00000305921 TDRD9Q8NDG6 1382 aaKnown RBP21.7■■□□□ 1.06
PPM1D-201ENST00000305921 C14orf37Q86TY3 774 aa21.69■■□□□ 1.06
PPM1D-201ENST00000305921 SUPT16HQ9Y5B9 1047 aaKnown RBP21.67■■□□□ 1.06
PPM1D-201ENST00000305921 DCAF11Q8TEB1 546 aa21.67■■□□□ 1.06
PPM1D-201ENST00000305921 FMN1Q68DA7 1419 aa21.67■■□□□ 1.06
PPM1D-201ENST00000305921 WIZO95785 1651 aa21.66■■□□□ 1.06
PPM1D-201ENST00000305921 SENP3-EIF4A1A0A087X0R7 540 aa21.66■■□□□ 1.06
PPM1D-201ENST00000305921 CARMIL2Q6F5E8 1435 aa21.65■■□□□ 1.06
PPM1D-201ENST00000305921 CADPSQ9ULU8 1353 aa21.64■■□□□ 1.05
PPM1D-201ENST00000305921 POGKQ9P215 609 aa21.63■■□□□ 1.05
PPM1D-201ENST00000305921 ZBTB7CA1YPR0 619 aa21.62■■□□□ 1.05
PPM1D-201ENST00000305921 PPM1GO15355 546 aaPredicted RBP21.62■■□□□ 1.05
PPM1D-201ENST00000305921 KANK1Q14678 1352 aa21.61■■□□□ 1.05
PPM1D-201ENST00000305921 NBR1Q14596 966 aa21.6■■□□□ 1.05
PPM1D-201ENST00000305921 TMF1P82094 1093 aa21.6■■□□□ 1.05
PPM1D-201ENST00000305921 NUDCQ9Y266 331 aa21.6■■□□□ 1.05
PPM1D-201ENST00000305921 PLEKHG5O94827 1062 aa21.59■■□□□ 1.05
PPM1D-201ENST00000305921 PKD2Q13563 968 aa21.57■■□□□ 1.04
PPM1D-201ENST00000305921 NEUROD2Q15784 382 aa21.57■■□□□ 1.04
PPM1D-201ENST00000305921 MAPK8IP3Q9UPT6 1336 aa21.56■■□□□ 1.04
PPM1D-201ENST00000305921 ATAD2BQ9ULI0 1458 aa21.56■■□□□ 1.04
PPM1D-201ENST00000305921 RAB3GAP2Q9H2M9 1393 aa21.55■■□□□ 1.04
PPM1D-201ENST00000305921 CC2D1BQ5T0F9 858 aaKnown RBP21.55■■□□□ 1.04
PPM1D-201ENST00000305921 RAPGEF2Q9Y4G8 1499 aa21.53■■□□□ 1.04
PPM1D-201ENST00000305921 CCER2I3L3R5 266 aa21.51■■□□□ 1.03
PPM1D-201ENST00000305921 DDRGK1Q96HY6 314 aa21.51■■□□□ 1.03
PPM1D-201ENST00000305921 HSPA5P11021 654 aaKnown RBP21.51■■□□□ 1.03
PPM1D-201ENST00000305921 FTSJ3Q8IY81 847 aaKnown RBP21.51■■□□□ 1.03
PPM1D-201ENST00000305921 PPP4R2Q9NY27 417 aa21.51■■□□□ 1.03
PPM1D-201ENST00000305921 BECN1Q14457 450 aa21.5■■□□□ 1.03
PPM1D-201ENST00000305921 TNNT2P45379 298 aaPredicted RBP21.49■■□□□ 1.03
PPM1D-201ENST00000305921 A0A0G2JS52 829 aa21.49■■□□□ 1.03
PPM1D-201ENST00000305921 MPHOSPH9Q99550 1183 aa21.49■■□□□ 1.03
PPM1D-201ENST00000305921 FOXD1Q16676 465 aa21.48■■□□□ 1.03
PPM1D-201ENST00000305921 EFCAB2Q5VUJ9 269 aa21.48■■□□□ 1.03
PPM1D-201ENST00000305921 ANKRD30AQ9BXX3 1397 aa21.45■■□□□ 1.03
PPM1D-201ENST00000305921 FHOD3Q2V2M9 1422 aa21.45■■□□□ 1.02
PPM1D-201ENST00000305921 SMARCA4P51532 1647 aa21.45■■□□□ 1.02
PPM1D-201ENST00000305921 NUP155O75694 1391 aa21.45■■□□□ 1.02
PPM1D-201ENST00000305921 GGT6Q6P531 493 aa21.44■■□□□ 1.02
PPM1D-201ENST00000305921 U2SURPO15042 1029 aaKnown RBP21.43■■□□□ 1.02
PPM1D-201ENST00000305921 LAS1LQ9Y4W2 734 aaKnown RBP21.43■■□□□ 1.02
PPM1D-201ENST00000305921 HDGFP51858 240 aaKnown RBP21.42■■□□□ 1.02
PPM1D-201ENST00000305921 HAP1P54257 671 aaPredicted RBP21.42■■□□□ 1.02
PPM1D-201ENST00000305921 FRAT1Q92837 279 aaPredicted RBP21.4■■□□□ 1.02
PPM1D-201ENST00000305921 ARXQ96QS3 562 aa21.4■■□□□ 1.02
PPM1D-201ENST00000305921 PNNQ9H307 717 aaKnown RBP21.39■■□□□ 1.02
PPM1D-201ENST00000305921 MLECQ14165 292 aa21.39■■□□□ 1.01
PPM1D-201ENST00000305921 SRPK2P78362 688 aaKnown RBP21.38■■□□□ 1.01
PPM1D-201ENST00000305921 MS4A1P11836 297 aa21.37■■□□□ 1.01
PPM1D-201ENST00000305921 LMOD2Q6P5Q4 547 aa21.36■■□□□ 1.01
PPM1D-201ENST00000305921 CHMP4BQ9H444 224 aaKnown RBP21.36■■□□□ 1.01
PPM1D-201ENST00000305921 MORC1Q86VD1 984 aa21.36■■□□□ 1.01
PPM1D-201ENST00000305921 EIF5BO60841 1220 aaKnown RBP21.35■■□□□ 1.01
PPM1D-201ENST00000305921 RSPH4AQ5TD94 716 aa21.35■■□□□ 1.01
PPM1D-201ENST00000305921 JPH4Q96JJ6 628 aa21.34■■□□□ 1.01
PPM1D-201ENST00000305921 CCDC18Q5T9S5 1454 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms