RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 BIVM-ERCC5R4GMW8 1640 aa18.24■□□□□ 0.51
COL4A3-201ENST00000304990 ERICH3Q5RHP9 1530 aa18.23■□□□□ 0.51
COL4A3-201ENST00000304990 TOP2BQ02880 1626 aa18.22■□□□□ 0.51
COL4A3-201ENST00000304990 JPH4Q96JJ6 628 aa18.21■□□□□ 0.51
COL4A3-201ENST00000304990 ABCC10Q5T3U5 1492 aa18.2■□□□□ 0.5
COL4A3-201ENST00000304990 KDM6BO15054 1643 aa18.2■□□□□ 0.5
COL4A3-201ENST00000304990 TSPOAP1O95153 1857 aa18.18■□□□□ 0.5
COL4A3-201ENST00000304990 DIP2BQ9P265 1576 aa18.17■□□□□ 0.5
COL4A3-201ENST00000304990 MAPKBP1O60336 1514 aa18.16■□□□□ 0.5
COL4A3-201ENST00000304990 RUSC2Q8N2Y8 1516 aa18.15■□□□□ 0.5
COL4A3-201ENST00000304990 SUPT5HO00267 1087 aaKnown RBP18.15■□□□□ 0.5
COL4A3-201ENST00000304990 ADCY10Q96PN6 1610 aa18.12■□□□□ 0.49
COL4A3-201ENST00000304990 KDM4FA0A1W2PPD8 638 aa18.09■□□□□ 0.49
COL4A3-201ENST00000304990 FOXD1Q16676 465 aa18.05■□□□□ 0.48
COL4A3-201ENST00000304990 ILDR1Q86SU0 546 aaPredicted RBP18.05■□□□□ 0.48
COL4A3-201ENST00000304990 TTBK1Q5TCY1 1321 aaPredicted RBP18.01■□□□□ 0.47
COL4A3-201ENST00000304990 KIAA0586Q9BVV6 1533 aa17.98■□□□□ 0.47
COL4A3-201ENST00000304990 CUL7Q14999 1698 aa17.94■□□□□ 0.46
COL4A3-201ENST00000304990 PTPRGP23470 1445 aa17.93■□□□□ 0.46
COL4A3-201ENST00000304990 ADGRL1O94910 1474 aa17.91■□□□□ 0.46
COL4A3-201ENST00000304990 POTEDQ86YR6 584 aa17.89■□□□□ 0.45
COL4A3-201ENST00000304990 CARMIL2Q6F5E8 1435 aa17.89■□□□□ 0.45
COL4A3-201ENST00000304990 ABCC2Q92887 1545 aa17.88■□□□□ 0.45
COL4A3-201ENST00000304990 PPRC1Q5VV67 1664 aaKnown RBP17.87■□□□□ 0.45
COL4A3-201ENST00000304990 ASXL2Q76L83 1435 aa17.87■□□□□ 0.45
COL4A3-201ENST00000304990 KIF27Q86VH2 1401 aa17.87■□□□□ 0.45
COL4A3-201ENST00000304990 PLB1Q6P1J6 1458 aa17.87■□□□□ 0.45
COL4A3-201ENST00000304990 TNIKQ9UKE5 1360 aa17.86■□□□□ 0.45
COL4A3-201ENST00000304990 GLI2P10070 1586 aa17.86■□□□□ 0.45
COL4A3-201ENST00000304990 IGF1RP08069 1367 aa17.85■□□□□ 0.45
COL4A3-201ENST00000304990 HECW2Q9P2P5 1572 aa17.82■□□□□ 0.44
COL4A3-201ENST00000304990 TEX14Q8IWB6 1497 aa17.79■□□□□ 0.44
COL4A3-201ENST00000304990 IQGAP2Q13576 1575 aa17.79■□□□□ 0.44
COL4A3-201ENST00000304990 MAP3K4Q9Y6R4 1608 aa17.78■□□□□ 0.44
COL4A3-201ENST00000304990 UACAQ9BZF9 1416 aa17.77■□□□□ 0.44
COL4A3-201ENST00000304990 CARMIL1Q5VZK9 1371 aa17.77■□□□□ 0.43
COL4A3-201ENST00000304990 UHRF1BP1LA0JNW5 1464 aa17.76■□□□□ 0.43
COL4A3-201ENST00000304990 EPRSP07814 1512 aaKnown RBP17.74■□□□□ 0.43
COL4A3-201ENST00000304990 ZCCHC11Q5TAX3 1644 aaKnown RBP17.73■□□□□ 0.43
COL4A3-201ENST00000304990 COL17A1Q9UMD9 1497 aaPredicted RBP17.73■□□□□ 0.43
COL4A3-201ENST00000304990 KDM5BQ9UGL1 1544 aa17.69■□□□□ 0.42
COL4A3-201ENST00000304990 DISP1Q96F81 1524 aa17.67■□□□□ 0.42
COL4A3-201ENST00000304990 WDR7Q9Y4E6 1490 aa17.63■□□□□ 0.41
COL4A3-201ENST00000304990 KIAA0556O60303 1618 aa17.62■□□□□ 0.41
COL4A3-201ENST00000304990 UGGT2Q9NYU1 1516 aa17.61■□□□□ 0.41
COL4A3-201ENST00000304990 CFAP43Q8NDM7 1665 aa17.6■□□□□ 0.41
COL4A3-201ENST00000304990 KIF21BO75037 1637 aa17.59■□□□□ 0.41
COL4A3-201ENST00000304990 KCNH8Q96L42 1107 aa17.59■□□□□ 0.41
COL4A3-201ENST00000304990 CD109Q6YHK3 1445 aa17.58■□□□□ 0.41
COL4A3-201ENST00000304990 RAPGEF2Q9Y4G8 1499 aa17.57■□□□□ 0.4
COL4A3-201ENST00000304990 FBXO41Q8TF61 875 aa17.57■□□□□ 0.4
COL4A3-201ENST00000304990 MAGI3Q5TCQ9 1506 aa17.55■□□□□ 0.4
COL4A3-201ENST00000304990 CTTNBP2Q8WZ74 1663 aa17.54■□□□□ 0.4
COL4A3-201ENST00000304990 GOLGA3Q08378 1498 aa17.5■□□□□ 0.39
COL4A3-201ENST00000304990 FAM9AQ8IZU1 332 aaPredicted RBP17.47■□□□□ 0.39
COL4A3-201ENST00000304990 ABCA8O94911 1581 aa17.46■□□□□ 0.39
COL4A3-201ENST00000304990 ARAP3Q8WWN8 1544 aa17.42■□□□□ 0.38
COL4A3-201ENST00000304990 ARID3CA6NKF2 412 aa17.42■□□□□ 0.38
COL4A3-201ENST00000304990 PTPRMP28827 1452 aa17.42■□□□□ 0.38
COL4A3-201ENST00000304990 ADAMTSL3P82987 1691 aa17.41■□□□□ 0.38
COL4A3-201ENST00000304990 ARID4BQ4LE39 1312 aaPredicted RBP17.4■□□□□ 0.38
COL4A3-201ENST00000304990 BCORL1Q5H9F3 1711 aa17.35■□□□□ 0.37
COL4A3-201ENST00000304990 PHLDB1Q86UU1 1377 aa17.35■□□□□ 0.37
COL4A3-201ENST00000304990 PCF11O94913 1555 aaKnown RBP17.35■□□□□ 0.37
COL4A3-201ENST00000304990 ABCA9Q8IUA7 1624 aa17.35■□□□□ 0.37
COL4A3-201ENST00000304990 MADDQ8WXG6 1647 aa17.35■□□□□ 0.37
COL4A3-201ENST00000304990 RAPGEF3O95398 923 aa17.34■□□□□ 0.37
COL4A3-201ENST00000304990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.33■□□□□ 0.36
COL4A3-201ENST00000304990 HNRNPUL2Q1KMD3 747 aaKnown RBP17.33■□□□□ 0.36
COL4A3-201ENST00000304990 P3H3Q8IVL6 736 aa17.33■□□□□ 0.36
COL4A3-201ENST00000304990 RIMS1Q86UR5 1692 aaKnown RBP17.32■□□□□ 0.36
COL4A3-201ENST00000304990 PLPPR3Q6T4P5 718 aa17.31■□□□□ 0.36
COL4A3-201ENST00000304990 ATP10BO94823 1461 aa17.31■□□□□ 0.36
COL4A3-201ENST00000304990 NEO1Q92859 1461 aa17.29■□□□□ 0.36
COL4A3-201ENST00000304990 LMTK3Q96Q04 1460 aa17.29■□□□□ 0.36
COL4A3-201ENST00000304990 FRMPD1Q5SYB0 1578 aa17.26■□□□□ 0.35
COL4A3-201ENST00000304990 RAPGEF6Q8TEU7 1601 aa17.25■□□□□ 0.35
COL4A3-201ENST00000304990 HSPA2P54652 639 aa17.23■□□□□ 0.35
COL4A3-201ENST00000304990 ARHGEF40Q8TER5 1519 aa17.22■□□□□ 0.35
COL4A3-201ENST00000304990 PRXQ9BXM0 1461 aa17.21■□□□□ 0.35
COL4A3-201ENST00000304990 POGZQ7Z3K3 1410 aa17.21■□□□□ 0.34
COL4A3-201ENST00000304990 CFAP74Q9C0B2 1584 aa17.19■□□□□ 0.34
COL4A3-201ENST00000304990 DENND4BO75064 1496 aaPredicted RBP17.19■□□□□ 0.34
COL4A3-201ENST00000304990 RICTORQ6R327 1708 aa17.19■□□□□ 0.34
COL4A3-201ENST00000304990 FANCAO15360 1455 aa17.18■□□□□ 0.34
COL4A3-201ENST00000304990 CERKQ8TCT0 537 aa17.18■□□□□ 0.34
COL4A3-201ENST00000304990 SAMD9Q5K651 1589 aa17.16■□□□□ 0.34
COL4A3-201ENST00000304990 AKNAQ7Z591 1439 aa17.16■□□□□ 0.34
COL4A3-201ENST00000304990 FER1L4A9Z1Z3 1794 aa17.15■□□□□ 0.34
COL4A3-201ENST00000304990 RANGAP1P46060 587 aaPredicted RBP17.15■□□□□ 0.34
COL4A3-201ENST00000304990 MLECQ14165 292 aa17.15■□□□□ 0.34
COL4A3-201ENST00000304990 PLEKHD1A6NEE1 506 aa17.14■□□□□ 0.33
COL4A3-201ENST00000304990 ZFYVE16Q7Z3T8 1539 aa17.14■□□□□ 0.33
COL4A3-201ENST00000304990 EFCAB5A4FU69 1503 aa17.13■□□□□ 0.33
COL4A3-201ENST00000304990 MSH5O43196 834 aa17.13■□□□□ 0.33
COL4A3-201ENST00000304990 DISP3Q9P2K9 1392 aa17.11■□□□□ 0.33
COL4A3-201ENST00000304990 NUP153P49790 1475 aaKnown RBP17.11■□□□□ 0.33
COL4A3-201ENST00000304990 FHOD3Q2V2M9 1422 aa17.1■□□□□ 0.33
COL4A3-201ENST00000304990 ZMYM4Q5VZL5 1548 aa17.09■□□□□ 0.33
COL4A3-201ENST00000304990 SIGLEC1Q9BZZ2 1709 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms