RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 PPARGC1BQ86YN6 1023 aaKnown RBP16.4■□□□□ 0.22
CLP1-201ENST00000302731 ADAMTS12P58397 1594 aa16.39■□□□□ 0.21
CLP1-201ENST00000302731 ZNF608Q9ULD9 1512 aaPredicted RBP16.37■□□□□ 0.21
CLP1-201ENST00000302731 HRCP23327 699 aa16.36■□□□□ 0.21
CLP1-201ENST00000302731 EIF4G3O43432 1585 aaKnown RBP16.34■□□□□ 0.21
CLP1-201ENST00000302731 MAP3K1Q13233 1512 aa16.32■□□□□ 0.2
CLP1-201ENST00000302731 MAGI1Q96QZ7 1491 aaPredicted RBP16.29■□□□□ 0.2
CLP1-201ENST00000302731 SAMD9Q5K651 1589 aa16.29■□□□□ 0.2
CLP1-201ENST00000302731 SNAPC4Q5SXM2 1469 aa16.26■□□□□ 0.19
CLP1-201ENST00000302731 FMN1Q68DA7 1419 aa16.24■□□□□ 0.19
CLP1-201ENST00000302731 IQGAP2Q13576 1575 aa16.24■□□□□ 0.19
CLP1-201ENST00000302731 FHOD3Q2V2M9 1422 aa16.23■□□□□ 0.19
CLP1-201ENST00000302731 FYCO1Q9BQS8 1478 aa16.23■□□□□ 0.19
CLP1-201ENST00000302731 TTBK1Q5TCY1 1321 aaPredicted RBP16.23■□□□□ 0.19
CLP1-201ENST00000302731 GRIN2AQ12879 1464 aa16.22■□□□□ 0.19
CLP1-201ENST00000302731 TIAM1Q13009 1591 aa16.22■□□□□ 0.19
CLP1-201ENST00000302731 CASKIN1Q8WXD9 1431 aa16.22■□□□□ 0.19
CLP1-201ENST00000302731 SYNJ2O15056 1496 aa16.21■□□□□ 0.19
CLP1-201ENST00000302731 PCF11O94913 1555 aaKnown RBP16.2■□□□□ 0.18
CLP1-201ENST00000302731 KIAA0586Q9BVV6 1533 aa16.2■□□□□ 0.18
CLP1-201ENST00000302731 UGGT2Q9NYU1 1516 aa16.19■□□□□ 0.18
CLP1-201ENST00000302731 CFAP43Q8NDM7 1665 aa16.18■□□□□ 0.18
CLP1-201ENST00000302731 KANK4Q5T7N3 995 aaPredicted RBP16.18■□□□□ 0.18
CLP1-201ENST00000302731 P3H3Q8IVL6 736 aa16.17■□□□□ 0.18
CLP1-201ENST00000302731 ZEB1P37275 1124 aaPredicted RBP16.16■□□□□ 0.18
CLP1-201ENST00000302731 LRRC9Q6ZRR7 1453 aa16.15■□□□□ 0.18
CLP1-201ENST00000302731 RRBP1Q9P2E9 1410 aaKnown RBP16.13■□□□□ 0.17
CLP1-201ENST00000302731 CHMP7Q8WUX9 453 aaPredicted RBP16.12■□□□□ 0.17
CLP1-201ENST00000302731 NUP160Q12769 1436 aa16.12■□□□□ 0.17
CLP1-201ENST00000302731 CEP170Q5SW79 1584 aa16.1■□□□□ 0.17
CLP1-201ENST00000302731 KIAA0556O60303 1618 aa16.07■□□□□ 0.16
CLP1-201ENST00000302731 DISP1Q96F81 1524 aa16.07■□□□□ 0.16
CLP1-201ENST00000302731 CCDC18Q5T9S5 1454 aa16.05■□□□□ 0.16
CLP1-201ENST00000302731 HECW1Q76N89 1606 aa16.04■□□□□ 0.16
CLP1-201ENST00000302731 CCNB3Q8WWL7 1395 aa16.04■□□□□ 0.16
CLP1-201ENST00000302731 ATP1B4Q9UN42 357 aaPredicted RBP16.02■□□□□ 0.16
CLP1-201ENST00000302731 FBLN2P98095 1184 aa16.01■□□□□ 0.15
CLP1-201ENST00000302731 LRRIQ1Q96JM4 1722 aa16.01■□□□□ 0.15
CLP1-201ENST00000302731 CARMIL2Q6F5E8 1435 aa15.99■□□□□ 0.15
CLP1-201ENST00000302731 EHBP1L1Q8N3D4 1523 aa15.98■□□□□ 0.15
CLP1-201ENST00000302731 MTUS2Q5JR59 1369 aa15.98■□□□□ 0.15
CLP1-201ENST00000302731 PHLDB1Q86UU1 1377 aa15.98■□□□□ 0.15
CLP1-201ENST00000302731 HNRNPUL2Q1KMD3 747 aaKnown RBP15.97■□□□□ 0.15
CLP1-201ENST00000302731 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.97■□□□□ 0.15
CLP1-201ENST00000302731 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.97■□□□□ 0.15
CLP1-201ENST00000302731 CCER1Q8TC90 406 aaPredicted RBP15.97■□□□□ 0.15
CLP1-201ENST00000302731 JPH4Q96JJ6 628 aa15.97■□□□□ 0.15
CLP1-201ENST00000302731 EPRSP07814 1512 aaKnown RBP15.96■□□□□ 0.15
CLP1-201ENST00000302731 CHD1O14646 1710 aa15.94■□□□□ 0.14
CLP1-201ENST00000302731 SUPT6HQ7KZ85 1726 aaKnown RBP15.93■□□□□ 0.14
CLP1-201ENST00000302731 RAPGEF6Q8TEU7 1601 aa15.93■□□□□ 0.14
CLP1-201ENST00000302731 ARHGEF11O15085 1522 aa15.91■□□□□ 0.14
CLP1-201ENST00000302731 NCOA2Q15596 1464 aa15.9■□□□□ 0.14
CLP1-201ENST00000302731 NUP153P49790 1475 aaKnown RBP15.89■□□□□ 0.13
CLP1-201ENST00000302731 MAGI3Q5TCQ9 1506 aa15.89■□□□□ 0.13
CLP1-201ENST00000302731 FGD6Q6ZV73 1430 aa15.88■□□□□ 0.13
CLP1-201ENST00000302731 MYOM3Q5VTT5 1437 aa15.87■□□□□ 0.13
CLP1-201ENST00000302731 SHROOM2Q13796 1616 aa15.87■□□□□ 0.13
CLP1-201ENST00000302731 CDK13Q14004 1512 aaKnown RBP15.87■□□□□ 0.13
CLP1-201ENST00000302731 PRG4Q92954 1404 aaPredicted RBP15.84■□□□□ 0.13
CLP1-201ENST00000302731 CDK11AQ9UQ88 783 aaPredicted RBP15.84■□□□□ 0.13
CLP1-201ENST00000302731 ABCA8O94911 1581 aa15.83■□□□□ 0.13
CLP1-201ENST00000302731 PLB1Q6P1J6 1458 aa15.83■□□□□ 0.12
CLP1-201ENST00000302731 CLSPNQ9HAW4 1339 aa15.83■□□□□ 0.12
CLP1-201ENST00000302731 FAM50AQ14320 339 aaKnown RBP15.81■□□□□ 0.12
CLP1-201ENST00000302731 MIA2Q96PC5 1412 aa15.8■□□□□ 0.12
CLP1-201ENST00000302731 CLASP1Q7Z460 1538 aa15.8■□□□□ 0.12
CLP1-201ENST00000302731 TCOF1Q13428 1488 aaKnown RBP15.8■□□□□ 0.12
CLP1-201ENST00000302731 PTPRGP23470 1445 aa15.78■□□□□ 0.12
CLP1-201ENST00000302731 TROQ12816 1431 aaPredicted RBP15.78■□□□□ 0.12
CLP1-201ENST00000302731 PTPN23Q9H3S7 1636 aa15.77■□□□□ 0.12
CLP1-201ENST00000302731 SETD5Q9C0A6 1442 aa15.77■□□□□ 0.11
CLP1-201ENST00000302731 DHX57Q6P158 1386 aaKnown RBP15.76■□□□□ 0.11
CLP1-201ENST00000302731 ITGAEP38570 1179 aa15.76■□□□□ 0.11
CLP1-201ENST00000302731 ADCY10Q96PN6 1610 aa15.75■□□□□ 0.11
CLP1-201ENST00000302731 RAB3GAP2Q9H2M9 1393 aa15.73■□□□□ 0.11
CLP1-201ENST00000302731 ATP10BO94823 1461 aa15.72■□□□□ 0.11
CLP1-201ENST00000302731 ARID3CA6NKF2 412 aa15.72■□□□□ 0.11
CLP1-201ENST00000302731 UACAQ9BZF9 1416 aa15.71■□□□□ 0.11
CLP1-201ENST00000302731 HFM1A2PYH4 1435 aa15.69■□□□□ 0.1
CLP1-201ENST00000302731 ITSN2Q9NZM3 1697 aa15.68■□□□□ 0.1
CLP1-201ENST00000302731 PLEKHD1A6NEE1 506 aa15.68■□□□□ 0.1
CLP1-201ENST00000302731 PTPRKQ15262 1439 aa15.68■□□□□ 0.1
CLP1-201ENST00000302731 AKNAQ7Z591 1439 aa15.68■□□□□ 0.1
CLP1-201ENST00000302731 ERCC6L2Q5T890 1561 aa15.66■□□□□ 0.1
CLP1-201ENST00000302731 ABCC2Q92887 1545 aa15.66■□□□□ 0.1
CLP1-201ENST00000302731 KIF14Q15058 1648 aa15.66■□□□□ 0.1
CLP1-201ENST00000302731 UHRF1BP1LA0JNW5 1464 aa15.65■□□□□ 0.1
CLP1-201ENST00000302731 GPATCH8Q9UKJ3 1502 aaKnown RBP15.64■□□□□ 0.09
CLP1-201ENST00000302731 ABCC10Q5T3U5 1492 aa15.63■□□□□ 0.09
CLP1-201ENST00000302731 NAIPQ13075 1403 aa15.62■□□□□ 0.09
CLP1-201ENST00000302731 DNMT1P26358 1616 aaKnown RBP15.61■□□□□ 0.09
CLP1-201ENST00000302731 ACIN1Q9UKV3 1341 aaKnown RBP15.6■□□□□ 0.09
CLP1-201ENST00000302731 GCC2Q8IWJ2 1684 aa15.59■□□□□ 0.09
CLP1-201ENST00000302731 ROCK1Q13464 1354 aa15.59■□□□□ 0.09
CLP1-201ENST00000302731 CFDP1Q9UEE9 299 aaPredicted RBP15.59■□□□□ 0.09
CLP1-201ENST00000302731 DAPK1P53355 1430 aa15.58■□□□□ 0.09
CLP1-201ENST00000302731 MAPKBP1O60336 1514 aa15.58■□□□□ 0.08
CLP1-201ENST00000302731 CAMSAP2Q08AD1 1489 aa15.57■□□□□ 0.08
CLP1-201ENST00000302731 CDC42BPAQ5VT25 1732 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms