RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 TNIKQ9UKE5 1360 aa27.97■■■□□ 2.07
LTBP3-201ENST00000301873 RGL3Q3MIN7 710 aa27.92■■■□□ 2.06
LTBP3-201ENST00000301873 KCNH8Q96L42 1107 aa27.92■■■□□ 2.06
LTBP3-201ENST00000301873 SIN3AQ96ST3 1273 aa27.91■■■□□ 2.06
LTBP3-201ENST00000301873 SENP3Q9H4L4 574 aaPredicted RBP27.91■■■□□ 2.06
LTBP3-201ENST00000301873 WDR43Q15061 677 aaKnown RBP eCLIP27.9■■■□□ 2.06
LTBP3-201ENST00000301873 CECR2Q9BXF3 1484 aa27.89■■■□□ 2.05
LTBP3-201ENST00000301873 RB1CC1Q8TDY2 1594 aa27.86■■■□□ 2.05
LTBP3-201ENST00000301873 PLEKHD1A6NEE1 506 aa27.85■■■□□ 2.05
LTBP3-201ENST00000301873 HSP90AA1P07900 732 aaKnown RBP27.82■■■□□ 2.04
LTBP3-201ENST00000301873 NBR1Q14596 966 aa27.81■■■□□ 2.04
LTBP3-201ENST00000301873 KIF27Q86VH2 1401 aa27.81■■■□□ 2.04
LTBP3-201ENST00000301873 UPF2Q9HAU5 1272 aaKnown RBP27.79■■■□□ 2.04
LTBP3-201ENST00000301873 BAZ1BQ9UIG0 1483 aaKnown RBP27.79■■■□□ 2.04
LTBP3-201ENST00000301873 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.78■■■□□ 2.04
LTBP3-201ENST00000301873 CFDP1Q9UEE9 299 aaPredicted RBP27.77■■■□□ 2.04
LTBP3-201ENST00000301873 CEP164Q9UPV0 1460 aa27.77■■■□□ 2.04
LTBP3-201ENST00000301873 SOGA1O94964 1423 aa27.73■■■□□ 2.03
LTBP3-201ENST00000301873 SUPT16HQ9Y5B9 1047 aaKnown RBP27.7■■■□□ 2.03
LTBP3-201ENST00000301873 NACADO15069 1562 aa27.67■■■□□ 2.02
LTBP3-201ENST00000301873 CARD11Q9BXL7 1154 aa27.61■■■□□ 2.01
LTBP3-201ENST00000301873 EIF5BO60841 1220 aaKnown RBP27.6■■■□□ 2.01
LTBP3-201ENST00000301873 ARXQ96QS3 562 aa27.58■■■□□ 2.01
LTBP3-201ENST00000301873 CCNB3Q8WWL7 1395 aa27.56■■■□□ 2
LTBP3-201ENST00000301873 BAZ1AQ9NRL2 1556 aaPredicted RBP27.55■■■□□ 2
LTBP3-201ENST00000301873 KANK4Q5T7N3 995 aaPredicted RBP27.51■■□□□ 1.99
LTBP3-201ENST00000301873 PLEKHG5O94827 1062 aa27.49■■□□□ 1.99
LTBP3-201ENST00000301873 ANP32BQ92688 251 aaKnown RBP27.49■■□□□ 1.99
LTBP3-201ENST00000301873 CARMIL1Q5VZK9 1371 aa27.48■■□□□ 1.99
LTBP3-201ENST00000301873 KNSTRNQ9Y448 316 aa27.47■■□□□ 1.99
LTBP3-201ENST00000301873 NEUROD2Q15784 382 aa27.44■■□□□ 1.98
LTBP3-201ENST00000301873 PPP1R15AO75807 674 aaPredicted RBP27.41■■□□□ 1.98
LTBP3-201ENST00000301873 CUX2O14529 1486 aa27.4■■□□□ 1.98
LTBP3-201ENST00000301873 MROH2BQ7Z745 1585 aa27.39■■□□□ 1.98
LTBP3-201ENST00000301873 PPM1GO15355 546 aaPredicted RBP27.38■■□□□ 1.97
LTBP3-201ENST00000301873 CCDC88BA6NC98 1476 aa27.35■■□□□ 1.97
LTBP3-201ENST00000301873 CDCA8Q53HL2 280 aa27.34■■□□□ 1.97
LTBP3-201ENST00000301873 FHAD1B1AJZ9 1412 aa27.33■■□□□ 1.97
LTBP3-201ENST00000301873 DCAF11Q8TEB1 546 aa27.33■■□□□ 1.97
LTBP3-201ENST00000301873 VPS8Q8N3P4 1428 aa27.32■■□□□ 1.96
LTBP3-201ENST00000301873 ABCC8Q09428 1581 aa27.32■■□□□ 1.96
LTBP3-201ENST00000301873 TNNT2P45379 298 aaPredicted RBP27.31■■□□□ 1.96
LTBP3-201ENST00000301873 C14orf37Q86TY3 774 aa27.31■■□□□ 1.96
LTBP3-201ENST00000301873 CC2D1BQ5T0F9 858 aaKnown RBP27.3■■□□□ 1.96
LTBP3-201ENST00000301873 B4GALNT3Q6L9W6 998 aa27.3■■□□□ 1.96
LTBP3-201ENST00000301873 FOXD1Q16676 465 aa27.3■■□□□ 1.96
LTBP3-201ENST00000301873 MYH16Q9H6N6 1097 aa27.3■■□□□ 1.96
LTBP3-201ENST00000301873 ZBTB7CA1YPR0 619 aa27.29■■□□□ 1.96
LTBP3-201ENST00000301873 CFAP53Q96M91 514 aa27.29■■□□□ 1.96
LTBP3-201ENST00000301873 PPP4R2Q9NY27 417 aa27.27■■□□□ 1.96
LTBP3-201ENST00000301873 TIMELESSQ9UNS1 1208 aa27.25■■□□□ 1.95
LTBP3-201ENST00000301873 RGS3P49796 1198 aa27.21■■□□□ 1.95
LTBP3-201ENST00000301873 SETD5Q9C0A6 1442 aa27.2■■□□□ 1.94
LTBP3-201ENST00000301873 HSPA5P11021 654 aaKnown RBP27.2■■□□□ 1.94
LTBP3-201ENST00000301873 FRAT1Q92837 279 aaPredicted RBP27.18■■□□□ 1.94
LTBP3-201ENST00000301873 A0A0G2JS52 829 aa27.15■■□□□ 1.94
LTBP3-201ENST00000301873 ANP32EQ9BTT0 268 aa27.15■■□□□ 1.94
LTBP3-201ENST00000301873 LAS1LQ9Y4W2 734 aaKnown RBP27.15■■□□□ 1.94
LTBP3-201ENST00000301873 PKD2Q13563 968 aa27.14■■□□□ 1.94
LTBP3-201ENST00000301873 ARID4BQ4LE39 1312 aaPredicted RBP27.14■■□□□ 1.93
LTBP3-201ENST00000301873 TDRD9Q8NDG6 1382 aaKnown RBP27.13■■□□□ 1.93
LTBP3-201ENST00000301873 BECN1Q14457 450 aa27.13■■□□□ 1.93
LTBP3-201ENST00000301873 FTSJ3Q8IY81 847 aaKnown RBP27.13■■□□□ 1.93
LTBP3-201ENST00000301873 DDRGK1Q96HY6 314 aa27.13■■□□□ 1.93
LTBP3-201ENST00000301873 POGKQ9P215 609 aa27.13■■□□□ 1.93
LTBP3-201ENST00000301873 RAB3GAP2Q9H2M9 1393 aa27.12■■□□□ 1.93
LTBP3-201ENST00000301873 EIF4G1Q04637 1599 aaKnown RBP27.1■■□□□ 1.93
LTBP3-201ENST00000301873 CCER2I3L3R5 266 aa27.09■■□□□ 1.93
LTBP3-201ENST00000301873 TMF1P82094 1093 aa27.08■■□□□ 1.93
LTBP3-201ENST00000301873 U2SURPO15042 1029 aaKnown RBP27.08■■□□□ 1.92
LTBP3-201ENST00000301873 ERCC6Q03468 1493 aa27.08■■□□□ 1.92
LTBP3-201ENST00000301873 MAPK8IP3Q9UPT6 1336 aa27.07■■□□□ 1.92
LTBP3-201ENST00000301873 NUDCQ9Y266 331 aa27.06■■□□□ 1.92
LTBP3-201ENST00000301873 MPHOSPH9Q99550 1183 aa27.03■■□□□ 1.92
LTBP3-201ENST00000301873 SAFB2Q14151 953 aaKnown RBP eCLIP27.01■■□□□ 1.91
LTBP3-201ENST00000301873 ARHGAP35Q9NRY4 1499 aa27■■□□□ 1.91
LTBP3-201ENST00000301873 GGT6Q6P531 493 aa26.95■■□□□ 1.91
LTBP3-201ENST00000301873 LMOD2Q6P5Q4 547 aa26.94■■□□□ 1.9
LTBP3-201ENST00000301873 L3MBTL2Q969R5 705 aa26.93■■□□□ 1.9
LTBP3-201ENST00000301873 RBM19Q9Y4C8 960 aaKnown RBP26.91■■□□□ 1.9
LTBP3-201ENST00000301873 MLECQ14165 292 aa26.91■■□□□ 1.9
LTBP3-201ENST00000301873 NCLP19338 710 aaKnown RBP26.9■■□□□ 1.9
LTBP3-201ENST00000301873 NOP58Q9Y2X3 529 aaKnown RBP26.9■■□□□ 1.9
LTBP3-201ENST00000301873 NUP155O75694 1391 aa26.89■■□□□ 1.9
LTBP3-201ENST00000301873 SOX12O15370 315 aa26.89■■□□□ 1.89
LTBP3-201ENST00000301873 SRPK2P78362 688 aaKnown RBP26.88■■□□□ 1.89
LTBP3-201ENST00000301873 GOLGA6L22H0YM25 854 aa26.87■■□□□ 1.89
LTBP3-201ENST00000301873 WIZO95785 1651 aa26.86■■□□□ 1.89
LTBP3-201ENST00000301873 MORC1Q86VD1 984 aa26.86■■□□□ 1.89
LTBP3-201ENST00000301873 TPRNQ4KMQ1 711 aa26.85■■□□□ 1.89
LTBP3-201ENST00000301873 RAPGEF2Q9Y4G8 1499 aa26.84■■□□□ 1.89
LTBP3-201ENST00000301873 RUSC2Q8N2Y8 1516 aa26.84■■□□□ 1.89
LTBP3-201ENST00000301873 TRIM44Q96DX7 344 aaPredicted RBP26.84■■□□□ 1.89
LTBP3-201ENST00000301873 STK26Q9P289 416 aa26.83■■□□□ 1.89
LTBP3-201ENST00000301873 FMN1Q68DA7 1419 aa26.83■■□□□ 1.89
LTBP3-201ENST00000301873 FHOD3Q2V2M9 1422 aa26.82■■□□□ 1.88
LTBP3-201ENST00000301873 HAP1P54257 671 aaPredicted RBP26.8■■□□□ 1.88
LTBP3-201ENST00000301873 KANK1Q14678 1352 aa26.78■■□□□ 1.88
LTBP3-201ENST00000301873 HNRNPMP52272 730 aaKnown RBP eCLIP26.76■■□□□ 1.87
LTBP3-201ENST00000301873 RTN4Q9NQC3 1192 aaKnown RBP26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms