RNA–Protein interactions for RNA: ENST00000301821.10

RPSA-201, Transcript of ribosomal protein SA, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPSA, Length 1,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-201ENST00000301821 PRG4Q92954 1404 aaPredicted RBP18.44■□□□□ 0.54
RPSA-201ENST00000301821 SUPT5HO00267 1087 aaKnown RBP18.44■□□□□ 0.54
RPSA-201ENST00000301821 RUSC2Q8N2Y8 1516 aa18.38■□□□□ 0.53
RPSA-201ENST00000301821 JPH4Q96JJ6 628 aa18.36■□□□□ 0.53
RPSA-201ENST00000301821 ABCC10Q5T3U5 1492 aa18.33■□□□□ 0.53
RPSA-201ENST00000301821 FAM69CQ0P6D2 419 aa18.33■□□□□ 0.52
RPSA-201ENST00000301821 DIP2BQ9P265 1576 aa18.32■□□□□ 0.52
RPSA-201ENST00000301821 MAPKBP1O60336 1514 aa18.32■□□□□ 0.52
RPSA-201ENST00000301821 NPM1P06748 294 aaKnown RBP eCLIP18.31■□□□□ 0.52
RPSA-201ENST00000301821 ADCY10Q96PN6 1610 aa18.31■□□□□ 0.52
RPSA-201ENST00000301821 KDM6BO15054 1643 aa18.27■□□□□ 0.51
RPSA-201ENST00000301821 TSPOAP1O95153 1857 aa18.22■□□□□ 0.51
RPSA-201ENST00000301821 KIAA0586Q9BVV6 1533 aa18.19■□□□□ 0.5
RPSA-201ENST00000301821 CUL7Q14999 1698 aa18.16■□□□□ 0.5
RPSA-201ENST00000301821 KDM4FA0A1W2PPD8 638 aa18.16■□□□□ 0.5
RPSA-201ENST00000301821 TTBK1Q5TCY1 1321 aaPredicted RBP18.12■□□□□ 0.49
RPSA-201ENST00000301821 IGF1RP08069 1367 aa18.11■□□□□ 0.49
RPSA-201ENST00000301821 KIF27Q86VH2 1401 aa18.11■□□□□ 0.49
RPSA-201ENST00000301821 PTPRGP23470 1445 aa18.09■□□□□ 0.49
RPSA-201ENST00000301821 ABCC2Q92887 1545 aa18.06■□□□□ 0.48
RPSA-201ENST00000301821 PPRC1Q5VV67 1664 aaKnown RBP18.04■□□□□ 0.48
RPSA-201ENST00000301821 CARMIL2Q6F5E8 1435 aa18.03■□□□□ 0.48
RPSA-201ENST00000301821 ASXL2Q76L83 1435 aa18.03■□□□□ 0.48
RPSA-201ENST00000301821 TNIKQ9UKE5 1360 aa18.03■□□□□ 0.48
RPSA-201ENST00000301821 GLI2P10070 1586 aa18.01■□□□□ 0.47
RPSA-201ENST00000301821 IQGAP2Q13576 1575 aa18.01■□□□□ 0.47
RPSA-201ENST00000301821 CARMIL1Q5VZK9 1371 aa18.01■□□□□ 0.47
RPSA-201ENST00000301821 ADGRL1O94910 1474 aa18.01■□□□□ 0.47
RPSA-201ENST00000301821 PLB1Q6P1J6 1458 aa18.01■□□□□ 0.47
RPSA-201ENST00000301821 ILDR1Q86SU0 546 aaPredicted RBP17.98■□□□□ 0.47
RPSA-201ENST00000301821 UHRF1BP1LA0JNW5 1464 aa17.96■□□□□ 0.47
RPSA-201ENST00000301821 UACAQ9BZF9 1416 aa17.95■□□□□ 0.46
RPSA-201ENST00000301821 MAP3K4Q9Y6R4 1608 aa17.93■□□□□ 0.46
RPSA-201ENST00000301821 EPRSP07814 1512 aaKnown RBP17.93■□□□□ 0.46
RPSA-201ENST00000301821 DISP1Q96F81 1524 aa17.93■□□□□ 0.46
RPSA-201ENST00000301821 COL17A1Q9UMD9 1497 aaPredicted RBP17.92■□□□□ 0.46
RPSA-201ENST00000301821 FOXD1Q16676 465 aa17.91■□□□□ 0.46
RPSA-201ENST00000301821 ZCCHC11Q5TAX3 1644 aaKnown RBP17.9■□□□□ 0.46
RPSA-201ENST00000301821 TEX14Q8IWB6 1497 aa17.89■□□□□ 0.45
RPSA-201ENST00000301821 KDM5BQ9UGL1 1544 aa17.89■□□□□ 0.45
RPSA-201ENST00000301821 HECW2Q9P2P5 1572 aa17.87■□□□□ 0.45
RPSA-201ENST00000301821 KIAA0556O60303 1618 aa17.87■□□□□ 0.45
RPSA-201ENST00000301821 UGGT2Q9NYU1 1516 aa17.85■□□□□ 0.45
RPSA-201ENST00000301821 RAPGEF2Q9Y4G8 1499 aa17.82■□□□□ 0.44
RPSA-201ENST00000301821 WDR7Q9Y4E6 1490 aa17.81■□□□□ 0.44
RPSA-201ENST00000301821 CTTNBP2Q8WZ74 1663 aa17.74■□□□□ 0.43
RPSA-201ENST00000301821 CFAP43Q8NDM7 1665 aa17.74■□□□□ 0.43
RPSA-201ENST00000301821 MAGI3Q5TCQ9 1506 aa17.72■□□□□ 0.43
RPSA-201ENST00000301821 CD109Q6YHK3 1445 aa17.72■□□□□ 0.43
RPSA-201ENST00000301821 KIF21BO75037 1637 aa17.71■□□□□ 0.43
RPSA-201ENST00000301821 KCNH8Q96L42 1107 aa17.7■□□□□ 0.42
RPSA-201ENST00000301821 ABCA8O94911 1581 aa17.7■□□□□ 0.42
RPSA-201ENST00000301821 GOLGA3Q08378 1498 aa17.68■□□□□ 0.42
RPSA-201ENST00000301821 ARID3CA6NKF2 412 aa17.6■□□□□ 0.41
RPSA-201ENST00000301821 ARAP3Q8WWN8 1544 aa17.57■□□□□ 0.4
RPSA-201ENST00000301821 ABCA9Q8IUA7 1624 aa17.54■□□□□ 0.4
RPSA-201ENST00000301821 ADAMTSL3P82987 1691 aa17.53■□□□□ 0.4
RPSA-201ENST00000301821 PTPRMP28827 1452 aa17.53■□□□□ 0.4
RPSA-201ENST00000301821 PRXQ9BXM0 1461 aa17.53■□□□□ 0.4
RPSA-201ENST00000301821 ATP10BO94823 1461 aa17.52■□□□□ 0.4
RPSA-201ENST00000301821 P3H3Q8IVL6 736 aa17.52■□□□□ 0.4
RPSA-201ENST00000301821 FBXO41Q8TF61 875 aa17.51■□□□□ 0.39
RPSA-201ENST00000301821 FAM9AQ8IZU1 332 aaPredicted RBP17.49■□□□□ 0.39
RPSA-201ENST00000301821 RAPGEF3O95398 923 aa17.48■□□□□ 0.39
RPSA-201ENST00000301821 MADDQ8WXG6 1647 aa17.47■□□□□ 0.39
RPSA-201ENST00000301821 BCORL1Q5H9F3 1711 aa17.47■□□□□ 0.39
RPSA-201ENST00000301821 PHLDB1Q86UU1 1377 aa17.47■□□□□ 0.39
RPSA-201ENST00000301821 FRMPD1Q5SYB0 1578 aa17.47■□□□□ 0.39
RPSA-201ENST00000301821 RAPGEF6Q8TEU7 1601 aa17.47■□□□□ 0.39
RPSA-201ENST00000301821 NEO1Q92859 1461 aa17.46■□□□□ 0.39
RPSA-201ENST00000301821 ARID4BQ4LE39 1312 aaPredicted RBP17.45■□□□□ 0.38
RPSA-201ENST00000301821 PCF11O94913 1555 aaKnown RBP17.45■□□□□ 0.38
RPSA-201ENST00000301821 SAMD9Q5K651 1589 aa17.45■□□□□ 0.38
RPSA-201ENST00000301821 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.44■□□□□ 0.38
RPSA-201ENST00000301821 HNRNPUL2Q1KMD3 747 aaKnown RBP17.44■□□□□ 0.38
RPSA-201ENST00000301821 RIMS1Q86UR5 1692 aaKnown RBP17.42■□□□□ 0.38
RPSA-201ENST00000301821 LMTK3Q96Q04 1460 aa17.41■□□□□ 0.38
RPSA-201ENST00000301821 ARHGEF40Q8TER5 1519 aa17.41■□□□□ 0.38
RPSA-201ENST00000301821 NUP153P49790 1475 aaKnown RBP17.37■□□□□ 0.37
RPSA-201ENST00000301821 PLPPR3Q6T4P5 718 aa17.36■□□□□ 0.37
RPSA-201ENST00000301821 RICTORQ6R327 1708 aa17.35■□□□□ 0.37
RPSA-201ENST00000301821 DENND4BO75064 1496 aaPredicted RBP17.35■□□□□ 0.37
RPSA-201ENST00000301821 RANGAP1P46060 587 aaPredicted RBP17.34■□□□□ 0.37
RPSA-201ENST00000301821 CFAP74Q9C0B2 1584 aa17.33■□□□□ 0.37
RPSA-201ENST00000301821 FHOD3Q2V2M9 1422 aa17.33■□□□□ 0.36
RPSA-201ENST00000301821 FANCAO15360 1455 aa17.31■□□□□ 0.36
RPSA-201ENST00000301821 HSPA2P54652 639 aa17.31■□□□□ 0.36
RPSA-201ENST00000301821 AKNAQ7Z591 1439 aa17.3■□□□□ 0.36
RPSA-201ENST00000301821 TTC37Q6PGP7 1564 aa17.29■□□□□ 0.36
RPSA-201ENST00000301821 CSRNP3Q8WYN3 585 aa17.29■□□□□ 0.36
RPSA-201ENST00000301821 ZFYVE16Q7Z3T8 1539 aa17.29■□□□□ 0.36
RPSA-201ENST00000301821 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.29■□□□□ 0.36not detected■■□□□ 12.4
RPSA-201ENST00000301821 SIGLEC1Q9BZZ2 1709 aa17.29■□□□□ 0.36
RPSA-201ENST00000301821 ZMYM4Q5VZL5 1548 aa17.28■□□□□ 0.36
RPSA-201ENST00000301821 PLEKHD1A6NEE1 506 aa17.28■□□□□ 0.36
RPSA-201ENST00000301821 POGZQ7Z3K3 1410 aa17.28■□□□□ 0.36
RPSA-201ENST00000301821 EFCAB5A4FU69 1503 aa17.27■□□□□ 0.36
RPSA-201ENST00000301821 YEATS2Q9ULM3 1422 aa17.27■□□□□ 0.35
RPSA-201ENST00000301821 FER1L4A9Z1Z3 1794 aa17.25■□□□□ 0.35
RPSA-201ENST00000301821 HECW1Q76N89 1606 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms