RNA–Protein interactions for RNA: ENST00000300843.8

MARK4-202, Transcript of microtubule affinity regulating kinase 4, humanhuman

TSL 1 (best) BASIC

Gene MARK4, Length 5,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK4-202ENST00000300843 PLPPR3Q6T4P5 718 aa20.65■□□□□ 0.9
MARK4-202ENST00000300843 KCNH8Q96L42 1107 aa20.63■□□□□ 0.89
MARK4-202ENST00000300843 EIF4G2P78344 907 aaKnown RBP eCLIP20.61■□□□□ 0.894e-12■■■□□ 15.7
MARK4-202ENST00000300843 MRS2Q9HD23 443 aa20.58■□□□□ 0.89
MARK4-202ENST00000300843 CFDP1Q9UEE9 299 aaPredicted RBP20.57■□□□□ 0.88
MARK4-202ENST00000300843 WDR43Q15061 677 aaKnown RBP eCLIP20.57■□□□□ 0.88
MARK4-202ENST00000300843 AEBP2Q6ZN18 517 aaPredicted RBP20.57■□□□□ 0.88
MARK4-202ENST00000300843 SALL2Q9Y467 1007 aaPredicted RBP20.55■□□□□ 0.88
MARK4-202ENST00000300843 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.51■□□□□ 0.87
MARK4-202ENST00000300843 NPM2Q86SE8 214 aaKnown RBP20.5■□□□□ 0.87
MARK4-202ENST00000300843 HIRIP3Q9BW71 556 aaPredicted RBP20.5■□□□□ 0.87
MARK4-202ENST00000300843 MIER1Q8N108 512 aa20.49■□□□□ 0.87
MARK4-202ENST00000300843 FHAD1B1AJZ9 1412 aa20.45■□□□□ 0.86
MARK4-202ENST00000300843 CARMIL1Q5VZK9 1371 aa20.45■□□□□ 0.86
MARK4-202ENST00000300843 UPF2Q9HAU5 1272 aaKnown RBP20.44■□□□□ 0.86
MARK4-202ENST00000300843 CUX2O14529 1486 aa20.44■□□□□ 0.86
MARK4-202ENST00000300843 CCDC136Q96JN2 1154 aa20.43■□□□□ 0.86
MARK4-202ENST00000300843 RGL3Q3MIN7 710 aa20.42■□□□□ 0.86
MARK4-202ENST00000300843 MROH2BQ7Z745 1585 aa20.41■□□□□ 0.86
MARK4-202ENST00000300843 PPP1R15AO75807 674 aaPredicted RBP20.41■□□□□ 0.86
MARK4-202ENST00000300843 SOGA1O94964 1423 aa20.4■□□□□ 0.86
MARK4-202ENST00000300843 ARID4BQ4LE39 1312 aaPredicted RBP20.39■□□□□ 0.85
MARK4-202ENST00000300843 CCDC88BA6NC98 1476 aa20.38■□□□□ 0.85
MARK4-202ENST00000300843 PDS5BQ9NTI5 1447 aa20.38■□□□□ 0.85
MARK4-202ENST00000300843 CDCA8Q53HL2 280 aa20.37■□□□□ 0.85
MARK4-202ENST00000300843 SMARCA2P51531 1590 aa20.36■□□□□ 0.85
MARK4-202ENST00000300843 CCNB3Q8WWL7 1395 aa20.35■□□□□ 0.85
MARK4-202ENST00000300843 HSP90AA1P07900 732 aaKnown RBP20.34■□□□□ 0.85
MARK4-202ENST00000300843 CARD11Q9BXL7 1154 aa20.31■□□□□ 0.84
MARK4-202ENST00000300843 EIF4G1Q04637 1599 aaKnown RBP20.3■□□□□ 0.84
MARK4-202ENST00000300843 GLIPR1L2Q4G1C9 344 aa20.3■□□□□ 0.84
MARK4-202ENST00000300843 KNSTRNQ9Y448 316 aa20.26■□□□□ 0.83
MARK4-202ENST00000300843 SIN3AQ96ST3 1273 aa20.26■□□□□ 0.83
MARK4-202ENST00000300843 SENP3Q9H4L4 574 aaPredicted RBP20.26■□□□□ 0.83
MARK4-202ENST00000300843 CFAP53Q96M91 514 aa20.25■□□□□ 0.83
MARK4-202ENST00000300843 VPS8Q8N3P4 1428 aa20.24■□□□□ 0.83
MARK4-202ENST00000300843 ANP32BQ92688 251 aaKnown RBP20.24■□□□□ 0.83
MARK4-202ENST00000300843 C14orf37Q86TY3 774 aa20.23■□□□□ 0.83
MARK4-202ENST00000300843 SCAF1Q9H7N4 1312 aaKnown RBP20.23■□□□□ 0.83
MARK4-202ENST00000300843 ABCC8Q09428 1581 aa20.22■□□□□ 0.83
MARK4-202ENST00000300843 MYH16Q9H6N6 1097 aa20.2■□□□□ 0.82
MARK4-202ENST00000300843 IRX6P78412 446 aaPredicted RBP20.2■□□□□ 0.82
MARK4-202ENST00000300843 TIMELESSQ9UNS1 1208 aa20.19■□□□□ 0.82
MARK4-202ENST00000300843 HAP1P54257 671 aaPredicted RBP20.18■□□□□ 0.82
MARK4-202ENST00000300843 TOP2AP11388 1531 aaKnown RBP20.18■□□□□ 0.82
MARK4-202ENST00000300843 EIF5BO60841 1220 aaKnown RBP20.17■□□□□ 0.82
MARK4-202ENST00000300843 ARHGAP35Q9NRY4 1499 aa20.15■□□□□ 0.82
MARK4-202ENST00000300843 CARMIL2Q6F5E8 1435 aa20.14■□□□□ 0.81
MARK4-202ENST00000300843 ZBTB7CA1YPR0 619 aa20.13■□□□□ 0.81
MARK4-202ENST00000300843 KANK1Q14678 1352 aa20.12■□□□□ 0.81
MARK4-202ENST00000300843 SETD5Q9C0A6 1442 aa20.12■□□□□ 0.81
MARK4-202ENST00000300843 POGKQ9P215 609 aa20.1■□□□□ 0.81
MARK4-202ENST00000300843 TDRD9Q8NDG6 1382 aaKnown RBP20.1■□□□□ 0.81
MARK4-202ENST00000300843 FMN1Q68DA7 1419 aa20.1■□□□□ 0.81
MARK4-202ENST00000300843 WIZO95785 1651 aa20.08■□□□□ 0.81
MARK4-202ENST00000300843 CADPSQ9ULU8 1353 aa20.08■□□□□ 0.8
MARK4-202ENST00000300843 DCAF11Q8TEB1 546 aa20.08■□□□□ 0.8
MARK4-202ENST00000300843 KANK4Q5T7N3 995 aaPredicted RBP20.07■□□□□ 0.8
MARK4-202ENST00000300843 NUDCQ9Y266 331 aa20.06■□□□□ 0.8
MARK4-202ENST00000300843 PLEKHG5O94827 1062 aa20.06■□□□□ 0.8
MARK4-202ENST00000300843 PPM1GO15355 546 aaPredicted RBP20.05■□□□□ 0.8
MARK4-202ENST00000300843 A0A0G2JS52 829 aa20.04■□□□□ 0.8
MARK4-202ENST00000300843 HDGFP51858 240 aaKnown RBP20.04■□□□□ 0.8
MARK4-202ENST00000300843 TMF1P82094 1093 aa20.04■□□□□ 0.8
MARK4-202ENST00000300843 MAPK8IP3Q9UPT6 1336 aa20.02■□□□□ 0.8
MARK4-202ENST00000300843 SUPT16HQ9Y5B9 1047 aaKnown RBP20■□□□□ 0.79
MARK4-202ENST00000300843 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
MARK4-202ENST00000300843 RAPGEF2Q9Y4G8 1499 aa19.98■□□□□ 0.79
MARK4-202ENST00000300843 PKD2Q13563 968 aa19.98■□□□□ 0.79
MARK4-202ENST00000300843 SENP3-EIF4A1A0A087X0R7 540 aa19.97■□□□□ 0.79
MARK4-202ENST00000300843 CC2D1BQ5T0F9 858 aaKnown RBP19.97■□□□□ 0.79
MARK4-202ENST00000300843 NEUROD2Q15784 382 aa19.96■□□□□ 0.79
MARK4-202ENST00000300843 FTSJ3Q8IY81 847 aaKnown RBP19.95■□□□□ 0.78
MARK4-202ENST00000300843 DDRGK1Q96HY6 314 aa19.95■□□□□ 0.78
MARK4-202ENST00000300843 EFCAB2Q5VUJ9 269 aa19.95■□□□□ 0.78
MARK4-202ENST00000300843 FOXD1Q16676 465 aa19.94■□□□□ 0.78
MARK4-202ENST00000300843 BECN1Q14457 450 aa19.94■□□□□ 0.78
MARK4-202ENST00000300843 NBR1Q14596 966 aa19.94■□□□□ 0.78
MARK4-202ENST00000300843 SMARCA4P51532 1647 aa19.92■□□□□ 0.78
MARK4-202ENST00000300843 TNNT2P45379 298 aaPredicted RBP19.91■□□□□ 0.78
MARK4-202ENST00000300843 ANKRD30AQ9BXX3 1397 aa19.91■□□□□ 0.78
MARK4-202ENST00000300843 RAB3GAP2Q9H2M9 1393 aa19.91■□□□□ 0.78
MARK4-202ENST00000300843 PNNQ9H307 717 aaKnown RBP19.91■□□□□ 0.78
MARK4-202ENST00000300843 HSPA5P11021 654 aaKnown RBP19.9■□□□□ 0.78
MARK4-202ENST00000300843 GGT6Q6P531 493 aa19.9■□□□□ 0.78
MARK4-202ENST00000300843 MPHOSPH9Q99550 1183 aa19.9■□□□□ 0.78
MARK4-202ENST00000300843 CDK11BP21127 795 aaKnown RBP19.89■□□□□ 0.78
MARK4-202ENST00000300843 CCER2I3L3R5 266 aa19.89■□□□□ 0.77
MARK4-202ENST00000300843 LAS1LQ9Y4W2 734 aaKnown RBP19.89■□□□□ 0.77
MARK4-202ENST00000300843 MLECQ14165 292 aa19.88■□□□□ 0.77
MARK4-202ENST00000300843 PPP4R2Q9NY27 417 aa19.88■□□□□ 0.77
MARK4-202ENST00000300843 U2SURPO15042 1029 aaKnown RBP19.87■□□□□ 0.77
MARK4-202ENST00000300843 NUP155O75694 1391 aa19.87■□□□□ 0.77
MARK4-202ENST00000300843 FHOD3Q2V2M9 1422 aa19.86■□□□□ 0.77
MARK4-202ENST00000300843 LMOD2Q6P5Q4 547 aa19.86■□□□□ 0.77
MARK4-202ENST00000300843 OSCARQ8IYS5 282 aa19.86■□□□□ 0.77
MARK4-202ENST00000300843 SRPK2P78362 688 aaKnown RBP19.85■□□□□ 0.77
MARK4-202ENST00000300843 CHMP4BQ9H444 224 aaKnown RBP19.85■□□□□ 0.77
MARK4-202ENST00000300843 MS4A1P11836 297 aa19.85■□□□□ 0.77
MARK4-202ENST00000300843 DCAF8L1A6NGE4 600 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms