RNA–Protein interactions for RNA: ENST00000297904.3

VEGFD-201, Transcript of vascular endothelial growth factor D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFD, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFD-201ENST00000297904 MYO15BQ96JP2 1530 aa10.72□□□□□ -0.69
VEGFD-201ENST00000297904 NEUROD2Q15784 382 aa10.72□□□□□ -0.69
VEGFD-201ENST00000297904 RB1CC1Q8TDY2 1594 aa10.72□□□□□ -0.69
VEGFD-201ENST00000297904 DCAF8L1A6NGE4 600 aa10.71□□□□□ -0.69
VEGFD-201ENST00000297904 PLCD3Q8N3E9 789 aa10.71□□□□□ -0.69
VEGFD-201ENST00000297904 NACADO15069 1562 aa10.7□□□□□ -0.7
VEGFD-201ENST00000297904 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.7□□□□□ -0.7
VEGFD-201ENST00000297904 GTPBP6O43824 516 aaPredicted RBP10.68□□□□□ -0.7
VEGFD-201ENST00000297904 ARID3AQ99856 593 aa10.64□□□□□ -0.71
VEGFD-201ENST00000297904 RNF25Q96BH1 459 aaPredicted RBP10.62□□□□□ -0.71
VEGFD-201ENST00000297904 P3H3Q8IVL6 736 aa10.61□□□□□ -0.71
VEGFD-201ENST00000297904 MIER1Q8N108 512 aa10.59□□□□□ -0.71
VEGFD-201ENST00000297904 ZMYND15Q9H091 742 aa10.58□□□□□ -0.72
VEGFD-201ENST00000297904 ZCCHC6Q5VYS8 1495 aaKnown RBP10.58□□□□□ -0.72
VEGFD-201ENST00000297904 DCAF1Q9Y4B6 1507 aa10.57□□□□□ -0.72
VEGFD-201ENST00000297904 SLC24A3Q9HC58 644 aa10.57□□□□□ -0.72
VEGFD-201ENST00000297904 RSPH6AQ9H0K4 717 aa10.56□□□□□ -0.72
VEGFD-201ENST00000297904 STAG3Q9UJ98 1225 aa10.56□□□□□ -0.72
VEGFD-201ENST00000297904 KCNV2Q8TDN2 545 aa10.55□□□□□ -0.72
VEGFD-201ENST00000297904 ZC3H15Q8WU90 426 aaKnown RBP10.54□□□□□ -0.72
VEGFD-201ENST00000297904 APLP2Q06481 763 aa10.51□□□□□ -0.73
VEGFD-201ENST00000297904 TRIM41Q8WV44 630 aa10.5□□□□□ -0.73
VEGFD-201ENST00000297904 C1orf115Q9H7X2 142 aa10.5□□□□□ -0.73
VEGFD-201ENST00000297904 CCDC9Q9Y3X0 531 aaKnown RBP10.49□□□□□ -0.73
VEGFD-201ENST00000297904 ZEB1P37275 1124 aaPredicted RBP10.48□□□□□ -0.73
VEGFD-201ENST00000297904 POLA2Q14181 598 aa10.48□□□□□ -0.73
VEGFD-201ENST00000297904 LOC105371045A0A1W2PR82 267 aa10.46□□□□□ -0.73
VEGFD-201ENST00000297904 STK25O00506 426 aa10.46□□□□□ -0.73
VEGFD-201ENST00000297904 UNC13AQ9UPW8 1703 aa10.46□□□□□ -0.74
VEGFD-201ENST00000297904 ZBTB7CA1YPR0 619 aa10.45□□□□□ -0.74
VEGFD-201ENST00000297904 ARID3CA6NKF2 412 aa10.41□□□□□ -0.74
VEGFD-201ENST00000297904 RIOK3O14730 519 aaKnown RBP10.41□□□□□ -0.74
VEGFD-201ENST00000297904 PDIA4P13667 645 aaKnown RBP10.4□□□□□ -0.74
VEGFD-201ENST00000297904 WDR70Q9NW82 654 aa10.4□□□□□ -0.74
VEGFD-201ENST00000297904 NECTIN2Q92692 538 aa10.4□□□□□ -0.75
VEGFD-201ENST00000297904 MYT1Q01538 1121 aa10.39□□□□□ -0.75
VEGFD-201ENST00000297904 ZBTB47Q9UFB7 747 aaPredicted RBP10.37□□□□□ -0.75
VEGFD-201ENST00000297904 BICRAQ9NZM4 1560 aa10.36□□□□□ -0.75
VEGFD-201ENST00000297904 CADPS2Q86UW7 1296 aa10.36□□□□□ -0.75
VEGFD-201ENST00000297904 GPBP1L1Q9HC44 474 aaPredicted RBP10.36□□□□□ -0.75
VEGFD-201ENST00000297904 IL27Q8NEV9 243 aa10.35□□□□□ -0.75
VEGFD-201ENST00000297904 APBB1O00213 710 aa10.34□□□□□ -0.75
VEGFD-201ENST00000297904 PABPN1Q86U42 306 aaKnown RBP eCLIP10.34□□□□□ -0.75
VEGFD-201ENST00000297904 PLEKHG5O94827 1062 aa10.33□□□□□ -0.76
VEGFD-201ENST00000297904 ZNF692Q9BU19 519 aaPredicted RBP10.33□□□□□ -0.76
VEGFD-201ENST00000297904 RYDENQ9NUL5 291 aaKnown RBP10.32□□□□□ -0.76
VEGFD-201ENST00000297904 ZMYND10O75800 440 aa10.31□□□□□ -0.76
VEGFD-201ENST00000297904 SCRIBQ14160 1630 aa10.31□□□□□ -0.76
VEGFD-201ENST00000297904 STK24Q9Y6E0 443 aa10.31□□□□□ -0.76
VEGFD-201ENST00000297904 SEMA3EO15041 775 aa10.3□□□□□ -0.76
VEGFD-201ENST00000297904 GSE1Q14687 1217 aa10.3□□□□□ -0.76
VEGFD-201ENST00000297904 BCL11BQ9C0K0 894 aaPredicted RBP10.3□□□□□ -0.76
VEGFD-201ENST00000297904 VGFO15240 615 aaPredicted RBP10.29□□□□□ -0.76
VEGFD-201ENST00000297904 SPINK5Q9NQ38 1064 aaPredicted RBP10.28□□□□□ -0.76
VEGFD-201ENST00000297904 MKRN3Q13064 507 aaKnown RBP10.26□□□□□ -0.77
VEGFD-201ENST00000297904 TESPA1A2RU30 521 aaPredicted RBP10.24□□□□□ -0.77
VEGFD-201ENST00000297904 ACIN1Q9UKV3 1341 aaKnown RBP10.24□□□□□ -0.77
VEGFD-201ENST00000297904 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.23□□□□□ -0.77
VEGFD-201ENST00000297904 ARHGEF1Q92888 912 aaKnown RBP10.23□□□□□ -0.77
VEGFD-201ENST00000297904 ZFP91Q96JP5 570 aaPredicted RBP10.23□□□□□ -0.77
VEGFD-201ENST00000297904 KCTD17Q8N5Z5 321 aa10.21□□□□□ -0.77
VEGFD-201ENST00000297904 KDM4CQ9H3R0 1056 aa10.21□□□□□ -0.78
VEGFD-201ENST00000297904 ZBTB12Q9Y330 459 aaPredicted RBP10.21□□□□□ -0.78
VEGFD-201ENST00000297904 DCAF8Q5TAQ9 597 aa10.2□□□□□ -0.78
VEGFD-201ENST00000297904 CCDC82Q8N4S0 544 aa10.19□□□□□ -0.78
VEGFD-201ENST00000297904 NEUROD1Q13562 356 aa10.18□□□□□ -0.78
VEGFD-201ENST00000297904 BARGINQ6ZT62 677 aa10.18□□□□□ -0.78
VEGFD-201ENST00000297904 SSUH2Q9Y2M2 353 aa10.18□□□□□ -0.78
VEGFD-201ENST00000297904 IGSF3O75054 1194 aa10.17□□□□□ -0.78
VEGFD-201ENST00000297904 NUBP1P53384 320 aa10.17□□□□□ -0.78
VEGFD-201ENST00000297904 RAD21O60216 631 aa10.16□□□□□ -0.78
VEGFD-201ENST00000297904 CENPBP07199 599 aaPredicted RBP10.16□□□□□ -0.78
VEGFD-201ENST00000297904 AK7Q96M32 723 aa10.16□□□□□ -0.78
VEGFD-201ENST00000297904 E2F4Q16254 413 aa10.12□□□□□ -0.79
VEGFD-201ENST00000297904 SGIP1Q9BQI5 828 aa10.12□□□□□ -0.79
VEGFD-201ENST00000297904 EIF4G1Q04637 1599 aaKnown RBP10.11□□□□□ -0.79
VEGFD-201ENST00000297904 CAPN15O75808 1086 aa10.11□□□□□ -0.79
VEGFD-201ENST00000297904 OSCARQ8IYS5 282 aa10.11□□□□□ -0.79
VEGFD-201ENST00000297904 ABCB7O75027 752 aa10.1□□□□□ -0.79
VEGFD-201ENST00000297904 SPDYE2BA6NHP3 402 aa10.09□□□□□ -0.79
VEGFD-201ENST00000297904 SPDYE6P0CI01 402 aa10.09□□□□□ -0.79
VEGFD-201ENST00000297904 SPDYE2Q495Y8 402 aa10.09□□□□□ -0.79
VEGFD-201ENST00000297904 AEBP1Q8IUX7 1158 aa10.09□□□□□ -0.79
VEGFD-201ENST00000297904 KRI1Q8N9T8 703 aaKnown RBP10.09□□□□□ -0.79
VEGFD-201ENST00000297904 RGS22Q8NE09 1264 aa10.07□□□□□ -0.8
VEGFD-201ENST00000297904 CC2D2AQ9P2K1 1620 aa10.07□□□□□ -0.8
VEGFD-201ENST00000297904 DIEXFQ68CQ4 756 aaKnown RBP10.07□□□□□ -0.8
VEGFD-201ENST00000297904 FAM9AQ8IZU1 332 aaPredicted RBP10.07□□□□□ -0.8
VEGFD-201ENST00000297904 MTMR7Q9Y216 660 aa10.07□□□□□ -0.8
VEGFD-201ENST00000297904 PDE4DQ08499 809 aa10.06□□□□□ -0.8
VEGFD-201ENST00000297904 CCER1Q8TC90 406 aaPredicted RBP10.06□□□□□ -0.8
VEGFD-201ENST00000297904 FAM117AQ9C073 453 aa10.06□□□□□ -0.8
VEGFD-201ENST00000297904 SMYD5Q6GMV2 418 aa10.06□□□□□ -0.8
VEGFD-201ENST00000297904 CLUAP1Q96AJ1 413 aa10.06□□□□□ -0.8
VEGFD-201ENST00000297904 ZNF428Q96B54 188 aa10.05□□□□□ -0.8
VEGFD-201ENST00000297904 ZNF316A6NFI3 1004 aaPredicted RBP10.04□□□□□ -0.8
VEGFD-201ENST00000297904 FLIIQ13045 1269 aa10.04□□□□□ -0.8
VEGFD-201ENST00000297904 FAM212AQ96EL1 285 aa10.04□□□□□ -0.8
VEGFD-201ENST00000297904 TRIM66O15016 1216 aa10.03□□□□□ -0.8
VEGFD-201ENST00000297904 TRAIPQ9BWF2 469 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms