RNA–Protein interactions for RNA: ENST00000296530.12

FAM198B-201, Transcript of family with sequence similarity 198 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM198B, Length 4,985 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM198B-201ENST00000296530 CUX2O14529 1486 aa19.28■□□□□ 0.68
FAM198B-201ENST00000296530 SMARCA2P51531 1590 aa19.27■□□□□ 0.68
FAM198B-201ENST00000296530 GOLGA3Q08378 1498 aa19.27■□□□□ 0.68
FAM198B-201ENST00000296530 CARMIL1Q5VZK9 1371 aa19.25■□□□□ 0.67
FAM198B-201ENST00000296530 RGL3Q3MIN7 710 aa19.24■□□□□ 0.67
FAM198B-201ENST00000296530 EIF4G1Q04637 1599 aaKnown RBP19.24■□□□□ 0.67
FAM198B-201ENST00000296530 ZNF316A6NFI3 1004 aaPredicted RBP19.22■□□□□ 0.67
FAM198B-201ENST00000296530 TDRD9Q8NDG6 1382 aaKnown RBP19.21■□□□□ 0.67
FAM198B-201ENST00000296530 CARMIL2Q6F5E8 1435 aa19.21■□□□□ 0.67
FAM198B-201ENST00000296530 ACIN1Q9UKV3 1341 aaKnown RBP19.19■□□□□ 0.66
FAM198B-201ENST00000296530 SOGA1O94964 1423 aa19.19■□□□□ 0.66
FAM198B-201ENST00000296530 LMOD2Q6P5Q4 547 aa19.18■□□□□ 0.66
FAM198B-201ENST00000296530 TMC1Q8TDI8 760 aa19.16■□□□□ 0.66
FAM198B-201ENST00000296530 CEP164Q9UPV0 1460 aa19.15■□□□□ 0.66
FAM198B-201ENST00000296530 CCNB3Q8WWL7 1395 aa19.15■□□□□ 0.66
FAM198B-201ENST00000296530 HDGFP51858 240 aaKnown RBP19.15■□□□□ 0.66
FAM198B-201ENST00000296530 CADPSQ9ULU8 1353 aa19.14■□□□□ 0.66
FAM198B-201ENST00000296530 POGKQ9P215 609 aa19.1■□□□□ 0.65
FAM198B-201ENST00000296530 OSCARQ8IYS5 282 aa19.1■□□□□ 0.65
FAM198B-201ENST00000296530 GGT6Q6P531 493 aa19.09■□□□□ 0.65
FAM198B-201ENST00000296530 CYB5RLQ6IPT4 315 aa19.08■□□□□ 0.65
FAM198B-201ENST00000296530 CEP162Q5TB80 1403 aa19.08■□□□□ 0.64
FAM198B-201ENST00000296530 WDR43Q15061 677 aaKnown RBP eCLIP19.07■□□□□ 0.64
FAM198B-201ENST00000296530 KANK1Q14678 1352 aa19.07■□□□□ 0.64
FAM198B-201ENST00000296530 FHAD1B1AJZ9 1412 aa19.04■□□□□ 0.64
FAM198B-201ENST00000296530 MROH2BQ7Z745 1585 aa19.04■□□□□ 0.64
FAM198B-201ENST00000296530 EFCAB2Q5VUJ9 269 aa19.04■□□□□ 0.64
FAM198B-201ENST00000296530 SALL2Q9Y467 1007 aaPredicted RBP19.01■□□□□ 0.63
FAM198B-201ENST00000296530 CCDC88BA6NC98 1476 aa19.01■□□□□ 0.63
FAM198B-201ENST00000296530 DDX10Q13206 875 aaKnown RBP19■□□□□ 0.63
FAM198B-201ENST00000296530 TNIKQ9UKE5 1360 aa19■□□□□ 0.63
FAM198B-201ENST00000296530 CDCA8Q53HL2 280 aa19■□□□□ 0.63
FAM198B-201ENST00000296530 EIF4G2P78344 907 aaKnown RBP eCLIP18.98■□□□□ 0.63
FAM198B-201ENST00000296530 FAM9BQ8IZU0 186 aa18.98■□□□□ 0.63
FAM198B-201ENST00000296530 JPH4Q96JJ6 628 aa18.97■□□□□ 0.63
FAM198B-201ENST00000296530 PPM1GO15355 546 aaPredicted RBP18.95■□□□□ 0.62
FAM198B-201ENST00000296530 AEBP2Q6ZN18 517 aaPredicted RBP18.95■□□□□ 0.62
FAM198B-201ENST00000296530 MYO15BQ96JP2 1530 aa18.95■□□□□ 0.62
FAM198B-201ENST00000296530 ARXQ96QS3 562 aa18.94■□□□□ 0.62
FAM198B-201ENST00000296530 ATAD2BQ9ULI0 1458 aa18.93■□□□□ 0.62
FAM198B-201ENST00000296530 CFAP53Q96M91 514 aa18.9■□□□□ 0.62
FAM198B-201ENST00000296530 CARD11Q9BXL7 1154 aa18.89■□□□□ 0.62
FAM198B-201ENST00000296530 HNRNPUQ00839 825 aaKnown RBP eCLIP18.87■□□□□ 0.61
FAM198B-201ENST00000296530 KNSTRNQ9Y448 316 aa18.86■□□□□ 0.61
FAM198B-201ENST00000296530 MRS2Q9HD23 443 aa18.84■□□□□ 0.61
FAM198B-201ENST00000296530 RTL5Q5HYW3 569 aaPredicted RBP18.84■□□□□ 0.61
FAM198B-201ENST00000296530 HIRIP3Q9BW71 556 aaPredicted RBP18.83■□□□□ 0.61
FAM198B-201ENST00000296530 FANCD2Q9BXW9 1451 aa18.83■□□□□ 0.61
FAM198B-201ENST00000296530 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.82■□□□□ 0.6
FAM198B-201ENST00000296530 NPHP1O15259 732 aa18.81■□□□□ 0.6
FAM198B-201ENST00000296530 KIF3BO15066 747 aa18.8■□□□□ 0.6
FAM198B-201ENST00000296530 EID1Q9Y6B2 187 aa18.8■□□□□ 0.6
FAM198B-201ENST00000296530 FMN1Q68DA7 1419 aa18.78■□□□□ 0.6
FAM198B-201ENST00000296530 ABCC8Q09428 1581 aa18.77■□□□□ 0.6
FAM198B-201ENST00000296530 SRPK2P78362 688 aaKnown RBP18.77■□□□□ 0.6
FAM198B-201ENST00000296530 SAFB2Q14151 953 aaKnown RBP eCLIP18.77■□□□□ 0.6
FAM198B-201ENST00000296530 SPAG9O60271 1321 aaKnown RBP18.76■□□□□ 0.59
FAM198B-201ENST00000296530 DCAF11Q8TEB1 546 aa18.76■□□□□ 0.59
FAM198B-201ENST00000296530 TOP2AP11388 1531 aaKnown RBP18.76■□□□□ 0.59
FAM198B-201ENST00000296530 STK26Q9P289 416 aa18.75■□□□□ 0.59
FAM198B-201ENST00000296530 NUDCQ9Y266 331 aa18.75■□□□□ 0.59
FAM198B-201ENST00000296530 PTPRGP23470 1445 aa18.75■□□□□ 0.59
FAM198B-201ENST00000296530 SOX12O15370 315 aa18.75■□□□□ 0.59
FAM198B-201ENST00000296530 MYH16Q9H6N6 1097 aa18.73■□□□□ 0.59
FAM198B-201ENST00000296530 WASHC2CQ9Y4E1 1318 aa18.73■□□□□ 0.59
FAM198B-201ENST00000296530 FAM69CQ0P6D2 419 aa18.71■□□□□ 0.59
FAM198B-201ENST00000296530 MAPK8IP3Q9UPT6 1336 aa18.7■□□□□ 0.58
FAM198B-201ENST00000296530 RSPH4AQ5TD94 716 aa18.7■□□□□ 0.58
FAM198B-201ENST00000296530 HNRNPMP52272 730 aaKnown RBP eCLIP18.69■□□□□ 0.58
FAM198B-201ENST00000296530 TNNT2P45379 298 aaPredicted RBP18.68■□□□□ 0.58
FAM198B-201ENST00000296530 PAK3O75914 559 aaPredicted RBP18.68■□□□□ 0.58
FAM198B-201ENST00000296530 RAPGEF2Q9Y4G8 1499 aa18.67■□□□□ 0.58
FAM198B-201ENST00000296530 PKD2Q13563 968 aa18.67■□□□□ 0.58
FAM198B-201ENST00000296530 CCDC9Q9Y3X0 531 aaKnown RBP18.66■□□□□ 0.58
FAM198B-201ENST00000296530 WIZO95785 1651 aa18.66■□□□□ 0.58
FAM198B-201ENST00000296530 HSP90AA1P07900 732 aaKnown RBP18.66■□□□□ 0.58
FAM198B-201ENST00000296530 UPF2Q9HAU5 1272 aaKnown RBP18.65■□□□□ 0.58
FAM198B-201ENST00000296530 ANKRD30AQ9BXX3 1397 aa18.65■□□□□ 0.58
FAM198B-201ENST00000296530 ARHGAP35Q9NRY4 1499 aa18.65■□□□□ 0.58
FAM198B-201ENST00000296530 SMARCA4P51532 1647 aa18.64■□□□□ 0.57
FAM198B-201ENST00000296530 TMF1P82094 1093 aa18.64■□□□□ 0.57
FAM198B-201ENST00000296530 CSB-PGBD3P0DP91 1061 aa18.63■□□□□ 0.57
FAM198B-201ENST00000296530 NUP155O75694 1391 aa18.62■□□□□ 0.57
FAM198B-201ENST00000296530 U2SURPO15042 1029 aaKnown RBP18.62■□□□□ 0.57
FAM198B-201ENST00000296530 NEUROD2Q15784 382 aa18.61■□□□□ 0.57
FAM198B-201ENST00000296530 LAS1LQ9Y4W2 734 aaKnown RBP18.61■□□□□ 0.57
FAM198B-201ENST00000296530 SIN3AQ96ST3 1273 aa18.61■□□□□ 0.57
FAM198B-201ENST00000296530 HDGFL2Q7Z4V5 671 aaPredicted RBP18.59■□□□□ 0.57
FAM198B-201ENST00000296530 FHOD3Q2V2M9 1422 aa18.59■□□□□ 0.57
FAM198B-201ENST00000296530 CCDC18Q5T9S5 1454 aa18.55■□□□□ 0.56
FAM198B-201ENST00000296530 PNNQ9H307 717 aaKnown RBP18.55■□□□□ 0.56
FAM198B-201ENST00000296530 NCAPD3P42695 1498 aa18.55■□□□□ 0.56
FAM198B-201ENST00000296530 VPS8Q8N3P4 1428 aa18.55■□□□□ 0.56
FAM198B-201ENST00000296530 GAPVD1Q14C86 1478 aa18.54■□□□□ 0.56
FAM198B-201ENST00000296530 GTF3C3Q9Y5Q9 886 aa18.53■□□□□ 0.56
FAM198B-201ENST00000296530 KANK4Q5T7N3 995 aaPredicted RBP18.53■□□□□ 0.56
FAM198B-201ENST00000296530 NUTM2DQ5VT03 806 aaPredicted RBP18.52■□□□□ 0.55
FAM198B-201ENST00000296530 NGDNQ8NEJ9 315 aaKnown RBP18.51■□□□□ 0.55
FAM198B-201ENST00000296530 CC2D1BQ5T0F9 858 aaKnown RBP18.51■□□□□ 0.55
FAM198B-201ENST00000296530 ANP32AP39687 249 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms