RNA–Protein interactions for RNA: ENST00000296464.8

HSPA4L-201, Transcript of heat shock protein family A (Hsp70) member 4 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPA4L, Length 10,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA4L-201ENST00000296464 SCRIBQ14160 1630 aa13.43□□□□□ -0.26
HSPA4L-201ENST00000296464 PPP4R2Q9NY27 417 aa13.43□□□□□ -0.26
HSPA4L-201ENST00000296464 RBM19Q9Y4C8 960 aaKnown RBP13.42□□□□□ -0.26
HSPA4L-201ENST00000296464 CLIP1P30622 1438 aa13.42□□□□□ -0.26
HSPA4L-201ENST00000296464 FBLN2P98095 1184 aa13.4□□□□□ -0.26
HSPA4L-201ENST00000296464 EIF4G2P78344 907 aaKnown RBP eCLIP13.38□□□□□ -0.27
HSPA4L-201ENST00000296464 B4GALNT3Q6L9W6 998 aa13.38□□□□□ -0.27
HSPA4L-201ENST00000296464 PTMAP06454 111 aaKnown RBP13.38□□□□□ -0.27
HSPA4L-201ENST00000296464 CEP162Q5TB80 1403 aa13.38□□□□□ -0.27
HSPA4L-201ENST00000296464 GOLGA6L22H0YM25 854 aa13.37□□□□□ -0.27
HSPA4L-201ENST00000296464 NCLP19338 710 aaKnown RBP13.37□□□□□ -0.27
HSPA4L-201ENST00000296464 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.37□□□□□ -0.27
HSPA4L-201ENST00000296464 KDM2AQ9Y2K7 1162 aa13.36□□□□□ -0.27
HSPA4L-201ENST00000296464 MYH16Q9H6N6 1097 aa13.34□□□□□ -0.27
HSPA4L-201ENST00000296464 DNTTIP2Q5QJE6 756 aaKnown RBP13.34□□□□□ -0.27
HSPA4L-201ENST00000296464 RGS3P49796 1198 aa13.32□□□□□ -0.28
HSPA4L-201ENST00000296464 ZCCHC6Q5VYS8 1495 aaKnown RBP13.32□□□□□ -0.28
HSPA4L-201ENST00000296464 TSHZ2Q9NRE2 1034 aa13.31□□□□□ -0.28
HSPA4L-201ENST00000296464 ARID4BQ4LE39 1312 aaPredicted RBP13.29□□□□□ -0.28
HSPA4L-201ENST00000296464 TPRNQ4KMQ1 711 aa13.29□□□□□ -0.28
HSPA4L-201ENST00000296464 CHGAP10645 457 aaKnown RBP13.28□□□□□ -0.28
HSPA4L-201ENST00000296464 RRP7BPQ9NSQ0 103 aa13.27□□□□□ -0.29
HSPA4L-201ENST00000296464 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.26□□□□□ -0.29
HSPA4L-201ENST00000296464 MTUS2Q5JR59 1369 aa13.25□□□□□ -0.29
HSPA4L-201ENST00000296464 GOLGA3Q08378 1498 aa13.24□□□□□ -0.29
HSPA4L-201ENST00000296464 CDK11BP21127 795 aaKnown RBP13.24□□□□□ -0.29
HSPA4L-201ENST00000296464 L1TD1Q5T7N2 865 aaKnown RBP13.21□□□□□ -0.29
HSPA4L-201ENST00000296464 SIN3AQ96ST3 1273 aa13.21□□□□□ -0.29
HSPA4L-201ENST00000296464 AMER1Q5JTC6 1135 aaPredicted RBP13.2□□□□□ -0.3
HSPA4L-201ENST00000296464 FTSJ3Q8IY81 847 aaKnown RBP13.19□□□□□ -0.3
HSPA4L-201ENST00000296464 ARID3AQ99856 593 aa13.17□□□□□ -0.3
HSPA4L-201ENST00000296464 SPRYD3Q8NCJ5 442 aa13.17□□□□□ -0.3
HSPA4L-201ENST00000296464 HSP90AB1P08238 724 aaKnown RBP13.17□□□□□ -0.3
HSPA4L-201ENST00000296464 PLCB2Q00722 1185 aa13.15□□□□□ -0.3
HSPA4L-201ENST00000296464 MSNP26038 577 aaKnown RBP13.15□□□□□ -0.3
HSPA4L-201ENST00000296464 CASC1Q6TDU7 716 aa13.14□□□□□ -0.31
HSPA4L-201ENST00000296464 STAG3Q9UJ98 1225 aa13.13□□□□□ -0.31
HSPA4L-201ENST00000296464 CCER2I3L3R5 266 aa13.13□□□□□ -0.31
HSPA4L-201ENST00000296464 FRAT1Q92837 279 aaPredicted RBP13.13□□□□□ -0.31
HSPA4L-201ENST00000296464 EEA1Q15075 1411 aa13.13□□□□□ -0.31
HSPA4L-201ENST00000296464 TNIKQ9UKE5 1360 aa13.12□□□□□ -0.31
HSPA4L-201ENST00000296464 ZRSR1Q15695 479 aaKnown RBP13.12□□□□□ -0.31
HSPA4L-201ENST00000296464 KNSTRNQ9Y448 316 aa13.12□□□□□ -0.31
HSPA4L-201ENST00000296464 HSCBQ8IWL3 235 aa13.12□□□□□ -0.31
HSPA4L-201ENST00000296464 PNNQ9H307 717 aaKnown RBP13.12□□□□□ -0.31
HSPA4L-201ENST00000296464 NEUROD2Q15784 382 aa13.11□□□□□ -0.31
HSPA4L-201ENST00000296464 GZF1Q9H116 711 aaPredicted RBP13.1□□□□□ -0.31
HSPA4L-201ENST00000296464 CHAF1AQ13111 956 aaPredicted RBP13.1□□□□□ -0.31
HSPA4L-201ENST00000296464 ZBTB7CA1YPR0 619 aa13.09□□□□□ -0.31
HSPA4L-201ENST00000296464 IPO9Q96P70 1041 aaKnown RBP13.08□□□□□ -0.31
HSPA4L-201ENST00000296464 CARD11Q9BXL7 1154 aa13.08□□□□□ -0.31
HSPA4L-201ENST00000296464 TSPY4P0CV99 314 aa13.08□□□□□ -0.32
HSPA4L-201ENST00000296464 TSPY10P0CW01 314 aa13.08□□□□□ -0.32
HSPA4L-201ENST00000296464 SENP3Q9H4L4 574 aaPredicted RBP13.08□□□□□ -0.32
HSPA4L-201ENST00000296464 RGL3Q3MIN7 710 aa13.07□□□□□ -0.32
HSPA4L-201ENST00000296464 SLKQ9H2G2 1235 aaPredicted RBP13.07□□□□□ -0.32
HSPA4L-201ENST00000296464 CC2D1BQ5T0F9 858 aaKnown RBP13.07□□□□□ -0.32
HSPA4L-201ENST00000296464 RSF1Q96T23 1441 aaPredicted RBP13.05□□□□□ -0.32
HSPA4L-201ENST00000296464 CFAP53Q96M91 514 aa13.05□□□□□ -0.32
HSPA4L-201ENST00000296464 CEP164Q9UPV0 1460 aa13.05□□□□□ -0.32
HSPA4L-201ENST00000296464 CCNB3Q8WWL7 1395 aa13.03□□□□□ -0.32
HSPA4L-201ENST00000296464 GOLGA6L6A8MZA4 724 aa13.02□□□□□ -0.33
HSPA4L-201ENST00000296464 TCERG1O14776 1098 aaKnown RBP13.01□□□□□ -0.33
HSPA4L-201ENST00000296464 ESF1Q9H501 851 aaKnown RBP13.01□□□□□ -0.33
HSPA4L-201ENST00000296464 GOLGA6L3A6NEY3 463 aa12.99□□□□□ -0.33
HSPA4L-201ENST00000296464 HSP90AA2PQ14568 343 aaPredicted RBP12.99□□□□□ -0.33
HSPA4L-201ENST00000296464 RSPH6AQ9H0K4 717 aa12.99□□□□□ -0.33
HSPA4L-201ENST00000296464 CDCA8Q53HL2 280 aa12.98□□□□□ -0.33
HSPA4L-201ENST00000296464 HSPA5P11021 654 aaKnown RBP12.98□□□□□ -0.33
HSPA4L-201ENST00000296464 WRNQ14191 1432 aaPredicted RBP eCLIP12.98□□□□□ -0.33
HSPA4L-201ENST00000296464 DRC7Q8IY82 874 aa12.97□□□□□ -0.33
HSPA4L-201ENST00000296464 RCAN3Q9UKA8 241 aa12.97□□□□□ -0.33
HSPA4L-201ENST00000296464 MAPK8IP3Q9UPT6 1336 aa12.97□□□□□ -0.33
HSPA4L-201ENST00000296464 GBP4Q96PP9 640 aa12.97□□□□□ -0.33
HSPA4L-201ENST00000296464 PLPPR3Q6T4P5 718 aa12.97□□□□□ -0.33
HSPA4L-201ENST00000296464 NRDCO43847 1150 aa12.96□□□□□ -0.34
HSPA4L-201ENST00000296464 VSIG10Q8N0Z9 540 aa12.96□□□□□ -0.34
HSPA4L-201ENST00000296464 TAOK2Q9UL54 1235 aa12.96□□□□□ -0.34
HSPA4L-201ENST00000296464 KCNH8Q96L42 1107 aa12.95□□□□□ -0.34
HSPA4L-201ENST00000296464 KIAA2012Q0VF49 1180 aa12.94□□□□□ -0.34
HSPA4L-201ENST00000296464 GOLGA6L4A6NEF3 574 aa12.94□□□□□ -0.34
HSPA4L-201ENST00000296464 SETD5Q9C0A6 1442 aa12.94□□□□□ -0.34
HSPA4L-201ENST00000296464 MS4A1P11836 297 aa12.94□□□□□ -0.34
HSPA4L-201ENST00000296464 RB1CC1Q8TDY2 1594 aa12.91□□□□□ -0.34
HSPA4L-201ENST00000296464 CHMP4BQ9H444 224 aaKnown RBP12.91□□□□□ -0.34
HSPA4L-201ENST00000296464 FGD1P98174 961 aa12.9□□□□□ -0.34
HSPA4L-201ENST00000296464 USP35Q9P2H5 1018 aa12.9□□□□□ -0.34
HSPA4L-201ENST00000296464 PTMSP20962 102 aa12.9□□□□□ -0.34
HSPA4L-201ENST00000296464 FANCIQ9NVI1 1328 aa12.9□□□□□ -0.34
HSPA4L-201ENST00000296464 PLEKHG5O94827 1062 aa12.9□□□□□ -0.34
HSPA4L-201ENST00000296464 KCNJ4P48050 445 aa12.9□□□□□ -0.34
HSPA4L-201ENST00000296464 TIMELESSQ9UNS1 1208 aa12.9□□□□□ -0.34
HSPA4L-201ENST00000296464 NUDCQ9Y266 331 aa12.89□□□□□ -0.35
HSPA4L-201ENST00000296464 KTN1Q86UP2 1357 aaKnown RBP12.89□□□□□ -0.35
HSPA4L-201ENST00000296464 U2SURPO15042 1029 aaKnown RBP12.88□□□□□ -0.35
HSPA4L-201ENST00000296464 GSE1Q14687 1217 aa12.88□□□□□ -0.35
HSPA4L-201ENST00000296464 NAP1L2Q9ULW6 460 aaPredicted RBP12.88□□□□□ -0.35
HSPA4L-201ENST00000296464 CFDP1Q9UEE9 299 aaPredicted RBP12.88□□□□□ -0.35
HSPA4L-201ENST00000296464 SOGA1O94964 1423 aa12.88□□□□□ -0.35
HSPA4L-201ENST00000296464 KIF27Q86VH2 1401 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms