RNA–Protein interactions for RNA: ENST00000296088.11

SNRK-201, Transcript of SNF related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRK, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRK-201ENST00000296088 NOP58Q9Y2X3 529 aaKnown RBP16.19■□□□□ 0.18
SNRK-201ENST00000296088 STAG3Q9UJ98 1225 aa16.18■□□□□ 0.18
SNRK-201ENST00000296088 SALL2Q9Y467 1007 aaPredicted RBP16.16■□□□□ 0.18
SNRK-201ENST00000296088 MS4A1P11836 297 aa16.16■□□□□ 0.18
SNRK-201ENST00000296088 USP35Q9P2H5 1018 aa16.14■□□□□ 0.17
SNRK-201ENST00000296088 PPP4R2Q9NY27 417 aa16.13■□□□□ 0.17
SNRK-201ENST00000296088 MYO15BQ96JP2 1530 aa16.12■□□□□ 0.17
SNRK-201ENST00000296088 ZNF777Q9ULD5 760 aaPredicted RBP16.11■□□□□ 0.17
SNRK-201ENST00000296088 TNNT3P45378 269 aaPredicted RBP16.11■□□□□ 0.17
SNRK-201ENST00000296088 EIF4G2P78344 907 aaKnown RBP eCLIP16.1■□□□□ 0.17
SNRK-201ENST00000296088 CFAP53Q96M91 514 aa16.1■□□□□ 0.17
SNRK-201ENST00000296088 CDCA8Q53HL2 280 aa16.08■□□□□ 0.17
SNRK-201ENST00000296088 CHGAP10645 457 aaKnown RBP16.08■□□□□ 0.16
SNRK-201ENST00000296088 HSP90AB1P08238 724 aaKnown RBP16.07■□□□□ 0.16
SNRK-201ENST00000296088 GOLGA6L4A6NEF3 574 aa16.06■□□□□ 0.16
SNRK-201ENST00000296088 PLCB2Q00722 1185 aa16.06■□□□□ 0.16
SNRK-201ENST00000296088 KIAA2012Q0VF49 1180 aa16.04■□□□□ 0.16
SNRK-201ENST00000296088 FTSJ3Q8IY81 847 aaKnown RBP16.04■□□□□ 0.16
SNRK-201ENST00000296088 HSCBQ8IWL3 235 aa16.03■□□□□ 0.16
SNRK-201ENST00000296088 IRX6P78412 446 aaPredicted RBP16.01■□□□□ 0.15
SNRK-201ENST00000296088 ARID4BQ4LE39 1312 aaPredicted RBP16■□□□□ 0.15
SNRK-201ENST00000296088 FBLN2P98095 1184 aa16■□□□□ 0.15
SNRK-201ENST00000296088 PNNQ9H307 717 aaKnown RBP16■□□□□ 0.15
SNRK-201ENST00000296088 RTN4Q9NQC3 1192 aaKnown RBP16■□□□□ 0.15
SNRK-201ENST00000296088 DEKP35659 375 aaKnown RBP15.98■□□□□ 0.15
SNRK-201ENST00000296088 LAS1LQ9Y4W2 734 aaKnown RBP15.98■□□□□ 0.15
SNRK-201ENST00000296088 MCCP23508 829 aa15.98■□□□□ 0.15
SNRK-201ENST00000296088 GOLGA6L1Q8N7Z2 621 aa15.97■□□□□ 0.15
SNRK-201ENST00000296088 TSPY4P0CV99 314 aa15.96■□□□□ 0.15
SNRK-201ENST00000296088 TSPY10P0CW01 314 aa15.96■□□□□ 0.15
SNRK-201ENST00000296088 FGD1P98174 961 aa15.96■□□□□ 0.14
SNRK-201ENST00000296088 GBP4Q96PP9 640 aa15.95■□□□□ 0.14
SNRK-201ENST00000296088 HTATSF1O43719 755 aaKnown RBP15.95■□□□□ 0.14
SNRK-201ENST00000296088 CCDC180Q9P1Z9 1646 aa15.95■□□□□ 0.14
SNRK-201ENST00000296088 DRC7Q8IY82 874 aa15.95■□□□□ 0.14
SNRK-201ENST00000296088 SYAP1Q96A49 352 aaPredicted RBP15.94■□□□□ 0.14
SNRK-201ENST00000296088 P3H3Q8IVL6 736 aa15.93■□□□□ 0.14
SNRK-201ENST00000296088 NUDCQ9Y266 331 aa15.92■□□□□ 0.14
SNRK-201ENST00000296088 SETQ01105 290 aaPredicted RBP15.91■□□□□ 0.14
SNRK-201ENST00000296088 HAP1P54257 671 aaPredicted RBP15.9■□□□□ 0.14
SNRK-201ENST00000296088 SUPT16HQ9Y5B9 1047 aaKnown RBP15.9■□□□□ 0.14
SNRK-201ENST00000296088 KNSTRNQ9Y448 316 aa15.89■□□□□ 0.13
SNRK-201ENST00000296088 NPM1P06748 294 aaKnown RBP eCLIP15.89■□□□□ 0.13
SNRK-201ENST00000296088 KCNJ4P48050 445 aa15.89■□□□□ 0.13
SNRK-201ENST00000296088 MAPK8IP3Q9UPT6 1336 aa15.88■□□□□ 0.13
SNRK-201ENST00000296088 TPM4P67936 248 aa15.88■□□□□ 0.13
SNRK-201ENST00000296088 CALRP27797 417 aaKnown RBP15.87■□□□□ 0.13
SNRK-201ENST00000296088 CCDC34Q96HJ3 373 aa15.87■□□□□ 0.13
SNRK-201ENST00000296088 NOC3LQ8WTT2 800 aaKnown RBP15.86■□□□□ 0.13
SNRK-201ENST00000296088 RGS3P49796 1198 aa15.84■□□□□ 0.13
SNRK-201ENST00000296088 RSPH6AQ9H0K4 717 aa15.84■□□□□ 0.13
SNRK-201ENST00000296088 AMER1Q5JTC6 1135 aaPredicted RBP15.83■□□□□ 0.12
SNRK-201ENST00000296088 KDM2AQ9Y2K7 1162 aa15.82■□□□□ 0.12
SNRK-201ENST00000296088 CSPP1Q1MSJ5 1256 aa15.81■□□□□ 0.12
SNRK-201ENST00000296088 ARID3CA6NKF2 412 aa15.8■□□□□ 0.12
SNRK-201ENST00000296088 OS9Q13438 667 aaPredicted RBP15.8■□□□□ 0.12
SNRK-201ENST00000296088 TPRNQ4KMQ1 711 aa15.79■□□□□ 0.12
SNRK-201ENST00000296088 MTUS2Q5JR59 1369 aa15.79■□□□□ 0.12
SNRK-201ENST00000296088 GOLGA6L3A6NEY3 463 aa15.79■□□□□ 0.12
SNRK-201ENST00000296088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.79■□□□□ 0.121e-6■■□□□ 14
SNRK-201ENST00000296088 HSP90AA2PQ14568 343 aaPredicted RBP15.77■□□□□ 0.12
SNRK-201ENST00000296088 TULP1O00294 542 aaPredicted RBP15.75■□□□□ 0.11
SNRK-201ENST00000296088 TCERG1O14776 1098 aaKnown RBP15.75■□□□□ 0.11
SNRK-201ENST00000296088 A0A0U1RQG5 324 aaPredicted RBP15.75■□□□□ 0.11
SNRK-201ENST00000296088 PHF14O94880 888 aa15.75■□□□□ 0.11
SNRK-201ENST00000296088 GPS2Q13227 327 aa15.75■□□□□ 0.11
SNRK-201ENST00000296088 CHIC2Q9UKJ5 165 aa15.74■□□□□ 0.11
SNRK-201ENST00000296088 RSF1Q96T23 1441 aaPredicted RBP15.74■□□□□ 0.11
SNRK-201ENST00000296088 CCER2I3L3R5 266 aa15.73■□□□□ 0.11
SNRK-201ENST00000296088 GNL2Q13823 731 aaKnown RBP15.73■□□□□ 0.11
SNRK-201ENST00000296088 NAP1L2Q9ULW6 460 aaPredicted RBP15.73■□□□□ 0.11
SNRK-201ENST00000296088 CHMP4AQ9BY43 222 aa15.72■□□□□ 0.11
SNRK-201ENST00000296088 GOLGA2Q08379 1002 aa15.72■□□□□ 0.11
SNRK-201ENST00000296088 FRAT1Q92837 279 aaPredicted RBP15.72■□□□□ 0.11
SNRK-201ENST00000296088 RBM19Q9Y4C8 960 aaKnown RBP15.72■□□□□ 0.11
SNRK-201ENST00000296088 KIAA1211Q6ZU35 1233 aa15.71■□□□□ 0.11
SNRK-201ENST00000296088 TIMELESSQ9UNS1 1208 aa15.71■□□□□ 0.11
SNRK-201ENST00000296088 PPP1R15AO75807 674 aaPredicted RBP15.7■□□□□ 0.1
SNRK-201ENST00000296088 TPM3P06753 285 aa15.7■□□□□ 0.1
SNRK-201ENST00000296088 IPO8O15397 1037 aaKnown RBP15.69■□□□□ 0.1
SNRK-201ENST00000296088 A0A0G2JS52 829 aa15.69■□□□□ 0.1
SNRK-201ENST00000296088 TSHZ2Q9NRE2 1034 aa15.68■□□□□ 0.1
SNRK-201ENST00000296088 CALD1Q05682 793 aaKnown RBP15.67■□□□□ 0.1
SNRK-201ENST00000296088 C14orf37Q86TY3 774 aa15.66■□□□□ 0.1
SNRK-201ENST00000296088 CLSTN1O94985 981 aa15.65■□□□□ 0.1
SNRK-201ENST00000296088 CHMP4CQ96CF2 233 aa15.65■□□□□ 0.1
SNRK-201ENST00000296088 CARD11Q9BXL7 1154 aa15.65■□□□□ 0.1
SNRK-201ENST00000296088 RWDD1Q9H446 243 aaPredicted RBP15.65■□□□□ 0.1
SNRK-201ENST00000296088 B4GALNT3Q6L9W6 998 aa15.65■□□□□ 0.1
SNRK-201ENST00000296088 CEP89Q96ST8 783 aa15.64■□□□□ 0.09
SNRK-201ENST00000296088 HDAC5Q9UQL6 1122 aa15.64■□□□□ 0.09
SNRK-201ENST00000296088 CCDC70Q6NSX1 233 aa15.64■□□□□ 0.09
SNRK-201ENST00000296088 HIRIP3Q9BW71 556 aaPredicted RBP15.64■□□□□ 0.09
SNRK-201ENST00000296088 KIF3AQ9Y496 699 aa15.64■□□□□ 0.09
SNRK-201ENST00000296088 DDX11L8A8MPP1 907 aa15.63■□□□□ 0.09
SNRK-201ENST00000296088 TEX35Q5T0J7 233 aa15.62■□□□□ 0.09
SNRK-201ENST00000296088 SKOR2Q2VWA4 1001 aaPredicted RBP15.61■□□□□ 0.09
SNRK-201ENST00000296088 IPO9Q96P70 1041 aaKnown RBP15.61■□□□□ 0.09
SNRK-201ENST00000296088 EEA1Q15075 1411 aa15.61■□□□□ 0.09
SNRK-201ENST00000296088 ZBTB7CA1YPR0 619 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms