RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 EIF4G3O43432 1585 aaKnown RBP15.75■□□□□ 0.11
C9orf43-201ENST00000288462 AQRO60306 1485 aaKnown RBP eCLIP15.74■□□□□ 0.11
C9orf43-201ENST00000288462 ZNF608Q9ULD9 1512 aaPredicted RBP15.74■□□□□ 0.11
C9orf43-201ENST00000288462 FHAD1B1AJZ9 1412 aa15.73■□□□□ 0.11
C9orf43-201ENST00000288462 SAMD9Q5K651 1589 aa15.72■□□□□ 0.11
C9orf43-201ENST00000288462 MAP3K1Q13233 1512 aa15.7■□□□□ 0.1
C9orf43-201ENST00000288462 APLP2Q06481 763 aa15.7■□□□□ 0.1
C9orf43-201ENST00000288462 TTBK1Q5TCY1 1321 aaPredicted RBP15.69■□□□□ 0.1
C9orf43-201ENST00000288462 PCF11O94913 1555 aaKnown RBP15.68■□□□□ 0.1
C9orf43-201ENST00000288462 CFAP43Q8NDM7 1665 aa15.68■□□□□ 0.1
C9orf43-201ENST00000288462 TIAM1Q13009 1591 aa15.67■□□□□ 0.1
C9orf43-201ENST00000288462 FHOD3Q2V2M9 1422 aa15.64■□□□□ 0.09
C9orf43-201ENST00000288462 SNAPC4Q5SXM2 1469 aa15.64■□□□□ 0.09
C9orf43-201ENST00000288462 FYCO1Q9BQS8 1478 aa15.64■□□□□ 0.09
C9orf43-201ENST00000288462 IQGAP2Q13576 1575 aa15.64■□□□□ 0.09
C9orf43-201ENST00000288462 MAGI1Q96QZ7 1491 aaPredicted RBP15.62■□□□□ 0.09
C9orf43-201ENST00000288462 CASKIN1Q8WXD9 1431 aa15.6■□□□□ 0.09
C9orf43-201ENST00000288462 FMN1Q68DA7 1419 aa15.59■□□□□ 0.09
C9orf43-201ENST00000288462 GRIN2AQ12879 1464 aa15.59■□□□□ 0.09
C9orf43-201ENST00000288462 KANK4Q5T7N3 995 aaPredicted RBP15.58■□□□□ 0.08
C9orf43-201ENST00000288462 UGGT2Q9NYU1 1516 aa15.57■□□□□ 0.08
C9orf43-201ENST00000288462 LRRC9Q6ZRR7 1453 aa15.55■□□□□ 0.08
C9orf43-201ENST00000288462 SYNJ2O15056 1496 aa15.55■□□□□ 0.08
C9orf43-201ENST00000288462 RRBP1Q9P2E9 1410 aaKnown RBP15.55■□□□□ 0.08
C9orf43-201ENST00000288462 ZEB1P37275 1124 aaPredicted RBP15.55■□□□□ 0.08
C9orf43-201ENST00000288462 P3H3Q8IVL6 736 aa15.54■□□□□ 0.08
C9orf43-201ENST00000288462 LRRIQ1Q96JM4 1722 aa15.54■□□□□ 0.08
C9orf43-201ENST00000288462 KIAA0586Q9BVV6 1533 aa15.54■□□□□ 0.08
C9orf43-201ENST00000288462 CEP170Q5SW79 1584 aa15.51■□□□□ 0.07
C9orf43-201ENST00000288462 KIAA0556O60303 1618 aa15.49■□□□□ 0.07
C9orf43-201ENST00000288462 NUP160Q12769 1436 aa15.47■□□□□ 0.07
C9orf43-201ENST00000288462 HECW1Q76N89 1606 aa15.46■□□□□ 0.07
C9orf43-201ENST00000288462 DISP1Q96F81 1524 aa15.46■□□□□ 0.06
C9orf43-201ENST00000288462 CCNB3Q8WWL7 1395 aa15.43■□□□□ 0.06
C9orf43-201ENST00000288462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.43■□□□□ 0.06
C9orf43-201ENST00000288462 CCDC18Q5T9S5 1454 aa15.43■□□□□ 0.06
C9orf43-201ENST00000288462 PHLDB1Q86UU1 1377 aa15.41■□□□□ 0.06
C9orf43-201ENST00000288462 EHBP1L1Q8N3D4 1523 aa15.41■□□□□ 0.06
C9orf43-201ENST00000288462 HNRNPUL2Q1KMD3 747 aaKnown RBP15.4■□□□□ 0.06
C9orf43-201ENST00000288462 CCER1Q8TC90 406 aaPredicted RBP15.4■□□□□ 0.06
C9orf43-201ENST00000288462 CHMP7Q8WUX9 453 aaPredicted RBP15.4■□□□□ 0.06
C9orf43-201ENST00000288462 CHD1O14646 1710 aa15.38■□□□□ 0.05
C9orf43-201ENST00000288462 ATP1B4Q9UN42 357 aaPredicted RBP15.37■□□□□ 0.05
C9orf43-201ENST00000288462 SUPT6HQ7KZ85 1726 aaKnown RBP15.37■□□□□ 0.05
C9orf43-201ENST00000288462 EPRSP07814 1512 aaKnown RBP15.36■□□□□ 0.05
C9orf43-201ENST00000288462 MAGI3Q5TCQ9 1506 aa15.36■□□□□ 0.05
C9orf43-201ENST00000288462 RAPGEF6Q8TEU7 1601 aa15.36■□□□□ 0.05
C9orf43-201ENST00000288462 ARHGEF11O15085 1522 aa15.35■□□□□ 0.05
C9orf43-201ENST00000288462 MTUS2Q5JR59 1369 aa15.34■□□□□ 0.05
C9orf43-201ENST00000288462 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.32■□□□□ 0.04
C9orf43-201ENST00000288462 NCOA2Q15596 1464 aa15.32■□□□□ 0.04
C9orf43-201ENST00000288462 CDK13Q14004 1512 aaKnown RBP15.32■□□□□ 0.04
C9orf43-201ENST00000288462 NUP153P49790 1475 aaKnown RBP15.31■□□□□ 0.04
C9orf43-201ENST00000288462 FBLN2P98095 1184 aa15.3■□□□□ 0.04
C9orf43-201ENST00000288462 FGD6Q6ZV73 1430 aa15.3■□□□□ 0.04
C9orf43-201ENST00000288462 CARMIL2Q6F5E8 1435 aa15.29■□□□□ 0.04
C9orf43-201ENST00000288462 SHROOM2Q13796 1616 aa15.28■□□□□ 0.04
C9orf43-201ENST00000288462 MYOM3Q5VTT5 1437 aa15.27■□□□□ 0.04
C9orf43-201ENST00000288462 JPH4Q96JJ6 628 aa15.25■□□□□ 0.03
C9orf43-201ENST00000288462 ABCA8O94911 1581 aa15.25■□□□□ 0.03
C9orf43-201ENST00000288462 PTPN23Q9H3S7 1636 aa15.23■□□□□ 0.03
C9orf43-201ENST00000288462 PLB1Q6P1J6 1458 aa15.23■□□□□ 0.03
C9orf43-201ENST00000288462 DHX57Q6P158 1386 aaKnown RBP15.22■□□□□ 0.03
C9orf43-201ENST00000288462 TCOF1Q13428 1488 aaKnown RBP15.21■□□□□ 0.03
C9orf43-201ENST00000288462 ADCY10Q96PN6 1610 aa15.21■□□□□ 0.02
C9orf43-201ENST00000288462 FAM50AQ14320 339 aaKnown RBP15.2■□□□□ 0.02
C9orf43-201ENST00000288462 CLASP1Q7Z460 1538 aa15.19■□□□□ 0.02
C9orf43-201ENST00000288462 CLSPNQ9HAW4 1339 aa15.18■□□□□ 0.02
C9orf43-201ENST00000288462 PRG4Q92954 1404 aaPredicted RBP15.18■□□□□ 0.02
C9orf43-201ENST00000288462 SETD5Q9C0A6 1442 aa15.18■□□□□ 0.02
C9orf43-201ENST00000288462 RAB3GAP2Q9H2M9 1393 aa15.17■□□□□ 0.02
C9orf43-201ENST00000288462 MIA2Q96PC5 1412 aa15.17■□□□□ 0.02
C9orf43-201ENST00000288462 ITGAEP38570 1179 aa15.17■□□□□ 0.02
C9orf43-201ENST00000288462 TROQ12816 1431 aaPredicted RBP15.16■□□□□ 0.02
C9orf43-201ENST00000288462 ITSN2Q9NZM3 1697 aa15.14■□□□□ 0.01
C9orf43-201ENST00000288462 PTPRKQ15262 1439 aa15.13■□□□□ 0.01
C9orf43-201ENST00000288462 KIF14Q15058 1648 aa15.12■□□□□ 0.01
C9orf43-201ENST00000288462 ARID3CA6NKF2 412 aa15.12■□□□□ 0.01
C9orf43-201ENST00000288462 CDK11AQ9UQ88 783 aaPredicted RBP15.11■□□□□ 0.01
C9orf43-201ENST00000288462 GCC2Q8IWJ2 1684 aa15.11■□□□□ 0.01
C9orf43-201ENST00000288462 HFM1A2PYH4 1435 aa15.11■□□□□ 0.01
C9orf43-201ENST00000288462 PTPRGP23470 1445 aa15.1■□□□□ 0.01
C9orf43-201ENST00000288462 ERCC6L2Q5T890 1561 aa15.1■□□□□ 0.01
C9orf43-201ENST00000288462 ATP10BO94823 1461 aa15.1■□□□□ 0.01
C9orf43-201ENST00000288462 MAPKBP1O60336 1514 aa15.09■□□□□ 0.01
C9orf43-201ENST00000288462 AKNAQ7Z591 1439 aa15.08■□□□□ 0
C9orf43-201ENST00000288462 DNMT1P26358 1616 aaKnown RBP15.08■□□□□ 0
C9orf43-201ENST00000288462 CDC42BPAQ5VT25 1732 aa15.05■□□□□ 0
C9orf43-201ENST00000288462 ABCC2Q92887 1545 aa15.05■□□□□ -0
C9orf43-201ENST00000288462 NAIPQ13075 1403 aa15.05■□□□□ -0
C9orf43-201ENST00000288462 UACAQ9BZF9 1416 aa15.05■□□□□ -0
C9orf43-201ENST00000288462 ABCC10Q5T3U5 1492 aa15.04■□□□□ -0
C9orf43-201ENST00000288462 GPATCH8Q9UKJ3 1502 aaKnown RBP15.03■□□□□ -0
C9orf43-201ENST00000288462 CROCC2H7BZ55 1655 aa15.02■□□□□ -0
C9orf43-201ENST00000288462 CAMSAP2Q08AD1 1489 aa15.01□□□□□ -0.01
C9orf43-201ENST00000288462 DAPK1P53355 1430 aa15.01□□□□□ -0.01
C9orf43-201ENST00000288462 ADGBQ8N7X0 1667 aa14.99□□□□□ -0.01
C9orf43-201ENST00000288462 UHRF1BP1LA0JNW5 1464 aa14.99□□□□□ -0.01
C9orf43-201ENST00000288462 ABCC5O15440 1437 aa14.98□□□□□ -0.01
C9orf43-201ENST00000288462 ROCK1Q13464 1354 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms