RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 WRNQ14191 1432 aaPredicted RBP eCLIP26.09■■□□□ 1.77
LSM11-201ENST00000286307 KIF27Q86VH2 1401 aa26.08■■□□□ 1.77
LSM11-201ENST00000286307 FAM9BQ8IZU0 186 aa26.04■■□□□ 1.76
LSM11-201ENST00000286307 WDR43Q15061 677 aaKnown RBP eCLIP26.04■■□□□ 1.76
LSM11-201ENST00000286307 ARXQ96QS3 562 aa26.02■■□□□ 1.76
LSM11-201ENST00000286307 DDX10Q13206 875 aaKnown RBP25.97■■□□□ 1.75
LSM11-201ENST00000286307 CECR2Q9BXF3 1484 aa25.93■■□□□ 1.74
LSM11-201ENST00000286307 PPM1GO15355 546 aaPredicted RBP25.92■■□□□ 1.74
LSM11-201ENST00000286307 BAZ1AQ9NRL2 1556 aaPredicted RBP25.91■■□□□ 1.74
LSM11-201ENST00000286307 GOLGA3Q08378 1498 aa25.9■■□□□ 1.74
LSM11-201ENST00000286307 POGKQ9P215 609 aa25.9■■□□□ 1.74
LSM11-201ENST00000286307 HIRIP3Q9BW71 556 aaPredicted RBP25.85■■□□□ 1.73
LSM11-201ENST00000286307 PDS5BQ9NTI5 1447 aa25.85■■□□□ 1.73
LSM11-201ENST00000286307 DCAF1Q9Y4B6 1507 aa25.84■■□□□ 1.73
LSM11-201ENST00000286307 HNRNPUQ00839 825 aaKnown RBP eCLIP25.83■■□□□ 1.72
LSM11-201ENST00000286307 CUX2O14529 1486 aa25.82■■□□□ 1.72
LSM11-201ENST00000286307 NPHP1O15259 732 aa25.77■■□□□ 1.72
LSM11-201ENST00000286307 CCNB3Q8WWL7 1395 aa25.76■■□□□ 1.71
LSM11-201ENST00000286307 GGT6Q6P531 493 aa25.75■■□□□ 1.71
LSM11-201ENST00000286307 EEA1Q15075 1411 aa25.75■■□□□ 1.71
LSM11-201ENST00000286307 HSP90AA1P07900 732 aaKnown RBP25.72■■□□□ 1.71
LSM11-201ENST00000286307 CARMIL1Q5VZK9 1371 aa25.72■■□□□ 1.71
LSM11-201ENST00000286307 KANK1Q14678 1352 aa25.71■■□□□ 1.71
LSM11-201ENST00000286307 HDGFP51858 240 aaKnown RBP25.71■■□□□ 1.71
LSM11-201ENST00000286307 EIF4G2P78344 907 aaKnown RBP eCLIP25.7■■□□□ 1.7
LSM11-201ENST00000286307 CEP162Q5TB80 1403 aa25.69■■□□□ 1.7
LSM11-201ENST00000286307 MRS2Q9HD23 443 aa25.68■■□□□ 1.7
LSM11-201ENST00000286307 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.66■■□□□ 1.7
LSM11-201ENST00000286307 CEP164Q9UPV0 1460 aa25.65■■□□□ 1.7
LSM11-201ENST00000286307 GTF3C3Q9Y5Q9 886 aa25.65■■□□□ 1.7
LSM11-201ENST00000286307 CARMIL2Q6F5E8 1435 aa25.65■■□□□ 1.7
LSM11-201ENST00000286307 TDRD9Q8NDG6 1382 aaKnown RBP25.64■■□□□ 1.69
LSM11-201ENST00000286307 CFAP53Q96M91 514 aa25.64■■□□□ 1.69
LSM11-201ENST00000286307 SOX12O15370 315 aa25.64■■□□□ 1.69
LSM11-201ENST00000286307 MYH16Q9H6N6 1097 aa25.64■■□□□ 1.69
LSM11-201ENST00000286307 SOGA1O94964 1423 aa25.63■■□□□ 1.69
LSM11-201ENST00000286307 CARD11Q9BXL7 1154 aa25.62■■□□□ 1.69
LSM11-201ENST00000286307 SMARCA2P51531 1590 aa25.61■■□□□ 1.69
LSM11-201ENST00000286307 CDCA8Q53HL2 280 aa25.6■■□□□ 1.69
LSM11-201ENST00000286307 AEBP2Q6ZN18 517 aaPredicted RBP25.6■■□□□ 1.69
LSM11-201ENST00000286307 KNSTRNQ9Y448 316 aa25.6■■□□□ 1.69
LSM11-201ENST00000286307 SAFB2Q14151 953 aaKnown RBP eCLIP25.58■■□□□ 1.69
LSM11-201ENST00000286307 TNNT2P45379 298 aaPredicted RBP25.58■■□□□ 1.69
LSM11-201ENST00000286307 UPF2Q9HAU5 1272 aaKnown RBP25.58■■□□□ 1.69
LSM11-201ENST00000286307 LAS1LQ9Y4W2 734 aaKnown RBP25.57■■□□□ 1.68
LSM11-201ENST00000286307 CYB5RLQ6IPT4 315 aa25.54■■□□□ 1.68
LSM11-201ENST00000286307 ANP32AP39687 249 aaKnown RBP25.53■■□□□ 1.68
LSM11-201ENST00000286307 ACIN1Q9UKV3 1341 aaKnown RBP25.52■■□□□ 1.68
LSM11-201ENST00000286307 STK26Q9P289 416 aa25.52■■□□□ 1.68
LSM11-201ENST00000286307 SENP3-EIF4A1A0A087X0R7 540 aa25.5■■□□□ 1.67
LSM11-201ENST00000286307 SRPK2P78362 688 aaKnown RBP25.49■■□□□ 1.67
LSM11-201ENST00000286307 FKBP8Q14318 412 aa25.48■■□□□ 1.67
LSM11-201ENST00000286307 NEUROD2Q15784 382 aa25.47■■□□□ 1.67
LSM11-201ENST00000286307 FHAD1B1AJZ9 1412 aa25.46■■□□□ 1.67
LSM11-201ENST00000286307 PAK3O75914 559 aaPredicted RBP25.46■■□□□ 1.67
LSM11-201ENST00000286307 CCDC9Q9Y3X0 531 aaKnown RBP25.44■■□□□ 1.66
LSM11-201ENST00000286307 MAPK8IP3Q9UPT6 1336 aa25.44■■□□□ 1.66
LSM11-201ENST00000286307 CCDC88BA6NC98 1476 aa25.42■■□□□ 1.66
LSM11-201ENST00000286307 DCAF11Q8TEB1 546 aa25.42■■□□□ 1.66
LSM11-201ENST00000286307 EFCAB2Q5VUJ9 269 aa25.41■■□□□ 1.66
LSM11-201ENST00000286307 TNIKQ9UKE5 1360 aa25.41■■□□□ 1.66
LSM11-201ENST00000286307 NUDCQ9Y266 331 aa25.4■■□□□ 1.66
LSM11-201ENST00000286307 MROH2BQ7Z745 1585 aa25.39■■□□□ 1.66
LSM11-201ENST00000286307 U2SURPO15042 1029 aaKnown RBP25.39■■□□□ 1.65
LSM11-201ENST00000286307 CCDC136Q96JN2 1154 aa25.37■■□□□ 1.65
LSM11-201ENST00000286307 OSCARQ8IYS5 282 aa25.36■■□□□ 1.65
LSM11-201ENST00000286307 CC2D1BQ5T0F9 858 aaKnown RBP25.34■■□□□ 1.65
LSM11-201ENST00000286307 CSB-PGBD3P0DP91 1061 aa25.33■■□□□ 1.65
LSM11-201ENST00000286307 CADPSQ9ULU8 1353 aa25.31■■□□□ 1.64
LSM11-201ENST00000286307 EID1Q9Y6B2 187 aa25.3■■□□□ 1.64
LSM11-201ENST00000286307 ABCC8Q09428 1581 aa25.3■■□□□ 1.64
LSM11-201ENST00000286307 KIF3BO15066 747 aa25.29■■□□□ 1.64
LSM11-201ENST00000286307 SIN3AQ96ST3 1273 aa25.29■■□□□ 1.64
LSM11-201ENST00000286307 JPH4Q96JJ6 628 aa25.26■■□□□ 1.63
LSM11-201ENST00000286307 IRX6P78412 446 aaPredicted RBP25.26■■□□□ 1.63
LSM11-201ENST00000286307 NUTM2DQ5VT03 806 aaPredicted RBP25.26■■□□□ 1.63
LSM11-201ENST00000286307 HNRNPMP52272 730 aaKnown RBP eCLIP25.24■■□□□ 1.63
LSM11-201ENST00000286307 TMF1P82094 1093 aa25.23■■□□□ 1.63
LSM11-201ENST00000286307 FTSJ3Q8IY81 847 aaKnown RBP25.23■■□□□ 1.63
LSM11-201ENST00000286307 TULP1O00294 542 aaPredicted RBP25.22■■□□□ 1.63
LSM11-201ENST00000286307 GOLGA2Q08379 1002 aa25.21■■□□□ 1.63
LSM11-201ENST00000286307 ANP32BQ92688 251 aaKnown RBP25.21■■□□□ 1.63
LSM11-201ENST00000286307 WASHC2CQ9Y4E1 1318 aa25.21■■□□□ 1.63
LSM11-201ENST00000286307 PKD2Q13563 968 aa25.19■■□□□ 1.62
LSM11-201ENST00000286307 ARHGAP35Q9NRY4 1499 aa25.17■■□□□ 1.62
LSM11-201ENST00000286307 OS9Q13438 667 aaPredicted RBP25.17■■□□□ 1.62
LSM11-201ENST00000286307 WIZO95785 1651 aa25.17■■□□□ 1.62
LSM11-201ENST00000286307 SPAG9O60271 1321 aaKnown RBP25.17■■□□□ 1.62
LSM11-201ENST00000286307 FOXD1Q16676 465 aa25.17■■□□□ 1.62
LSM11-201ENST00000286307 HDGFL2Q7Z4V5 671 aaPredicted RBP25.17■■□□□ 1.62
LSM11-201ENST00000286307 ZNF330Q9Y3S2 320 aaPredicted RBP25.16■■□□□ 1.62
LSM11-201ENST00000286307 MYO15BQ96JP2 1530 aa25.16■■□□□ 1.62
LSM11-201ENST00000286307 TAOK2Q9UL54 1235 aa25.15■■□□□ 1.62
LSM11-201ENST00000286307 PNNQ9H307 717 aaKnown RBP25.14■■□□□ 1.62
LSM11-201ENST00000286307 MORC1Q86VD1 984 aa25.13■■□□□ 1.61
LSM11-201ENST00000286307 CDK11BP21127 795 aaKnown RBP25.12■■□□□ 1.61
LSM11-201ENST00000286307 RTF1Q92541 710 aaKnown RBP25.1■■□□□ 1.61
LSM11-201ENST00000286307 FANCD2Q9BXW9 1451 aa25.1■■□□□ 1.61
LSM11-201ENST00000286307 NUTM2FA1L443 756 aa25.1■■□□□ 1.61
LSM11-201ENST00000286307 FAM69CQ0P6D2 419 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms