RNA–Protein interactions for RNA: ENST00000279052.10

ERGIC3-201, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 2,846 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-201ENST00000279052 HSP90AA2PQ14568 343 aaPredicted RBP14.61□□□□□ -0.07
ERGIC3-201ENST00000279052 CHMP4AQ9BY43 222 aa14.61□□□□□ -0.07
ERGIC3-201ENST00000279052 NACADO15069 1562 aa14.6□□□□□ -0.07
ERGIC3-201ENST00000279052 TULP1O00294 542 aaPredicted RBP14.59□□□□□ -0.07
ERGIC3-201ENST00000279052 NAP1L2Q9ULW6 460 aaPredicted RBP14.59□□□□□ -0.07
ERGIC3-201ENST00000279052 DHX37Q8IY37 1157 aaKnown RBP14.58□□□□□ -0.08
ERGIC3-201ENST00000279052 EHMT2Q96KQ7 1210 aa14.58□□□□□ -0.08
ERGIC3-201ENST00000279052 CECR2Q9BXF3 1484 aa14.57□□□□□ -0.08
ERGIC3-201ENST00000279052 FAM43AQ8N2R8 423 aa14.56□□□□□ -0.08
ERGIC3-201ENST00000279052 BRPF3Q9ULD4 1205 aa14.56□□□□□ -0.08
ERGIC3-201ENST00000279052 PAK3O75914 559 aaPredicted RBP14.55□□□□□ -0.08
ERGIC3-201ENST00000279052 MROH2BQ7Z745 1585 aa14.53□□□□□ -0.08
ERGIC3-201ENST00000279052 USP35Q9P2H5 1018 aa14.52□□□□□ -0.09
ERGIC3-201ENST00000279052 BBXQ8WY36 941 aaPredicted RBP14.49□□□□□ -0.09
ERGIC3-201ENST00000279052 NEFMP07197 916 aa14.48□□□□□ -0.09
ERGIC3-201ENST00000279052 IPO4Q8TEX9 1081 aaKnown RBP14.47□□□□□ -0.09
ERGIC3-201ENST00000279052 NPM2Q86SE8 214 aaKnown RBP14.46□□□□□ -0.09
ERGIC3-201ENST00000279052 CHMP4BQ9H444 224 aaKnown RBP14.46□□□□□ -0.1
ERGIC3-201ENST00000279052 SAMD1Q6SPF0 538 aaPredicted RBP14.45□□□□□ -0.1
ERGIC3-201ENST00000279052 WIZO95785 1651 aa14.45□□□□□ -0.1
ERGIC3-201ENST00000279052 HSP90AA1P07900 732 aaKnown RBP14.44□□□□□ -0.1
ERGIC3-201ENST00000279052 CALD1Q05682 793 aaKnown RBP14.44□□□□□ -0.1
ERGIC3-201ENST00000279052 PRDM4Q9UKN5 801 aa14.44□□□□□ -0.1
ERGIC3-201ENST00000279052 HAP1P54257 671 aaPredicted RBP14.41□□□□□ -0.1
ERGIC3-201ENST00000279052 GTF2E1P29083 439 aaPredicted RBP14.4□□□□□ -0.1
ERGIC3-201ENST00000279052 ZBTB47Q9UFB7 747 aaPredicted RBP14.39□□□□□ -0.11
ERGIC3-201ENST00000279052 CANXP27824 592 aaKnown RBP14.38□□□□□ -0.11
ERGIC3-201ENST00000279052 IPO9Q96P70 1041 aaKnown RBP14.38□□□□□ -0.11
ERGIC3-201ENST00000279052 BAZ1AQ9NRL2 1556 aaPredicted RBP14.37□□□□□ -0.11
ERGIC3-201ENST00000279052 ANP32AP39687 249 aaKnown RBP14.35□□□□□ -0.11
ERGIC3-201ENST00000279052 CENPJQ9HC77 1338 aaPredicted RBP14.34□□□□□ -0.11
ERGIC3-201ENST00000279052 CNGB1Q14028 1251 aaPredicted RBP14.33□□□□□ -0.11
ERGIC3-201ENST00000279052 RGS3P49796 1198 aa14.33□□□□□ -0.12
ERGIC3-201ENST00000279052 GSE1Q14687 1217 aa14.33□□□□□ -0.12
ERGIC3-201ENST00000279052 STAC3Q96MF2 364 aa14.33□□□□□ -0.12
ERGIC3-201ENST00000279052 ZFP91Q96JP5 570 aaPredicted RBP14.31□□□□□ -0.12
ERGIC3-201ENST00000279052 C14orf37Q86TY3 774 aa14.3□□□□□ -0.12
ERGIC3-201ENST00000279052 BCCIPQ9P287 314 aaKnown RBP eCLIP14.3□□□□□ -0.12
ERGIC3-201ENST00000279052 TEX2Q8IWB9 1127 aa14.28□□□□□ -0.12
ERGIC3-201ENST00000279052 FTSJ3Q8IY81 847 aaKnown RBP14.28□□□□□ -0.12
ERGIC3-201ENST00000279052 CNKSR2Q8WXI2 1034 aa14.27□□□□□ -0.12
ERGIC3-201ENST00000279052 PPM1GO15355 546 aaPredicted RBP14.26□□□□□ -0.13
ERGIC3-201ENST00000279052 EIF4G1Q04637 1599 aaKnown RBP14.26□□□□□ -0.13
ERGIC3-201ENST00000279052 NCLP19338 710 aaKnown RBP14.25□□□□□ -0.13
ERGIC3-201ENST00000279052 TOP2AP11388 1531 aaKnown RBP14.23□□□□□ -0.13
ERGIC3-201ENST00000279052 CHRM1P11229 460 aaPredicted RBP14.23□□□□□ -0.13
ERGIC3-201ENST00000279052 PDCL3Q9H2J4 239 aa14.22□□□□□ -0.13
ERGIC3-201ENST00000279052 CCDC88BA6NC98 1476 aa14.2□□□□□ -0.14
ERGIC3-201ENST00000279052 ABCC8Q09428 1581 aa14.19□□□□□ -0.14
ERGIC3-201ENST00000279052 SECISBP2LQ93073 1101 aaKnown RBP14.19□□□□□ -0.14
ERGIC3-201ENST00000279052 SMARCA4P51532 1647 aa14.19□□□□□ -0.14
ERGIC3-201ENST00000279052 HSP90B1P14625 803 aaKnown RBP14.19□□□□□ -0.14
ERGIC3-201ENST00000279052 PPP4R2Q9NY27 417 aa14.18□□□□□ -0.14
ERGIC3-201ENST00000279052 PNNQ9H307 717 aaKnown RBP14.16□□□□□ -0.14
ERGIC3-201ENST00000279052 KCNH8Q96L42 1107 aa14.16□□□□□ -0.14
ERGIC3-201ENST00000279052 RRAGDQ9NQL2 400 aaPredicted RBP14.15□□□□□ -0.14
ERGIC3-201ENST00000279052 SMARCA2P51531 1590 aa14.15□□□□□ -0.14
ERGIC3-201ENST00000279052 ARID4BQ4LE39 1312 aaPredicted RBP14.15□□□□□ -0.14
ERGIC3-201ENST00000279052 FRAT1Q92837 279 aaPredicted RBP14.15□□□□□ -0.14
ERGIC3-201ENST00000279052 LAS1LQ9Y4W2 734 aaKnown RBP14.13□□□□□ -0.15
ERGIC3-201ENST00000279052 CEP162Q5TB80 1403 aa14.13□□□□□ -0.15
ERGIC3-201ENST00000279052 IRX6P78412 446 aaPredicted RBP14.13□□□□□ -0.15
ERGIC3-201ENST00000279052 WRNQ14191 1432 aaPredicted RBP eCLIP14.12□□□□□ -0.15
ERGIC3-201ENST00000279052 CDK11BP21127 795 aaKnown RBP14.12□□□□□ -0.15
ERGIC3-201ENST00000279052 FBXO3Q9UK99 471 aa14.12□□□□□ -0.15
ERGIC3-201ENST00000279052 SOGA1O94964 1423 aa14.11□□□□□ -0.15
ERGIC3-201ENST00000279052 UBTFP17480 764 aaKnown RBP14.1□□□□□ -0.15
ERGIC3-201ENST00000279052 TNIKQ9UKE5 1360 aa14.1□□□□□ -0.15
ERGIC3-201ENST00000279052 FOXD1Q16676 465 aa14.09□□□□□ -0.15
ERGIC3-201ENST00000279052 EEA1Q15075 1411 aa14.09□□□□□ -0.15
ERGIC3-201ENST00000279052 AMER1Q5JTC6 1135 aaPredicted RBP14.08□□□□□ -0.16
ERGIC3-201ENST00000279052 DCAF11Q8TEB1 546 aa14.08□□□□□ -0.16
ERGIC3-201ENST00000279052 SMAP1Q8IYB5 467 aaPredicted RBP14.07□□□□□ -0.16
ERGIC3-201ENST00000279052 RNF216Q9NWF9 866 aaPredicted RBP14.07□□□□□ -0.16
ERGIC3-201ENST00000279052 PLCD3Q8N3E9 789 aa14.06□□□□□ -0.16
ERGIC3-201ENST00000279052 ZNF830Q96NB3 372 aaPredicted RBP14.06□□□□□ -0.16
ERGIC3-201ENST00000279052 CLCN1P35523 988 aa14.06□□□□□ -0.16
ERGIC3-201ENST00000279052 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.05□□□□□ -0.16
ERGIC3-201ENST00000279052 TMEM51Q9NW97 253 aa14.05□□□□□ -0.16
ERGIC3-201ENST00000279052 UNC13AQ9UPW8 1703 aa14.04□□□□□ -0.16
ERGIC3-201ENST00000279052 TPM2P07951 284 aa14.04□□□□□ -0.16
ERGIC3-201ENST00000279052 TAOK2Q9UL54 1235 aa14.03□□□□□ -0.16
ERGIC3-201ENST00000279052 CNPY4Q8N129 248 aa14.02□□□□□ -0.16
ERGIC3-201ENST00000279052 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.17
ERGIC3-201ENST00000279052 RUSC2Q8N2Y8 1516 aa14.01□□□□□ -0.17
ERGIC3-201ENST00000279052 VGFO15240 615 aaPredicted RBP14.01□□□□□ -0.17
ERGIC3-201ENST00000279052 DDRGK1Q96HY6 314 aa14.01□□□□□ -0.17
ERGIC3-201ENST00000279052 TRIM52Q96A61 297 aa14□□□□□ -0.17
ERGIC3-201ENST00000279052 GOLGA3Q08378 1498 aa13.99□□□□□ -0.17
ERGIC3-201ENST00000279052 UTP14CQ5TAP6 766 aaKnown RBP13.98□□□□□ -0.17
ERGIC3-201ENST00000279052 NFKBIBQ15653 356 aa13.97□□□□□ -0.17
ERGIC3-201ENST00000279052 ZHX1Q9UKY1 873 aaPredicted RBP13.97□□□□□ -0.17
ERGIC3-201ENST00000279052 MAP7D2Q96T17 732 aa13.96□□□□□ -0.17
ERGIC3-201ENST00000279052 RGS22Q8NE09 1264 aa13.96□□□□□ -0.18
ERGIC3-201ENST00000279052 B4GALNT3Q6L9W6 998 aa13.95□□□□□ -0.18
ERGIC3-201ENST00000279052 VGLL3A8MV65 326 aa13.94□□□□□ -0.18
ERGIC3-201ENST00000279052 CCER2I3L3R5 266 aa13.93□□□□□ -0.18
ERGIC3-201ENST00000279052 WWC1Q8IX03 1113 aa13.93□□□□□ -0.18
ERGIC3-201ENST00000279052 IRX3P78415 501 aaPredicted RBP13.92□□□□□ -0.18
ERGIC3-201ENST00000279052 PPP4R3BQ5MIZ7 849 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms