RNA–Protein interactions for RNA: ENST00000278947.5

SCN2B-201, Transcript of sodium voltage-gated channel beta subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN2B, Length 5,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2B-201ENST00000278947 CFDP1Q9UEE9 299 aaPredicted RBP17.93■□□□□ 0.46
SCN2B-201ENST00000278947 CUX2O14529 1486 aa17.92■□□□□ 0.46
SCN2B-201ENST00000278947 CARMIL2Q6F5E8 1435 aa17.91■□□□□ 0.46
SCN2B-201ENST00000278947 EIF4G1Q04637 1599 aaKnown RBP17.91■□□□□ 0.46
SCN2B-201ENST00000278947 CANXP27824 592 aaKnown RBP17.89■□□□□ 0.46
SCN2B-201ENST00000278947 FKBP8Q14318 412 aa17.89■□□□□ 0.45
SCN2B-201ENST00000278947 CARMIL1Q5VZK9 1371 aa17.88■□□□□ 0.45
SCN2B-201ENST00000278947 BCL11AQ9H165 835 aa17.88■□□□□ 0.45
SCN2B-201ENST00000278947 C14orf37Q86TY3 774 aa17.87■□□□□ 0.45
SCN2B-201ENST00000278947 SOGA1O94964 1423 aa17.85■□□□□ 0.45
SCN2B-201ENST00000278947 CADPSQ9ULU8 1353 aa17.85■□□□□ 0.45
SCN2B-201ENST00000278947 MROH2BQ7Z745 1585 aa17.83■□□□□ 0.44
SCN2B-201ENST00000278947 SCAF1Q9H7N4 1312 aaKnown RBP17.83■□□□□ 0.44
SCN2B-201ENST00000278947 FHAD1B1AJZ9 1412 aa17.82■□□□□ 0.44
SCN2B-201ENST00000278947 CCDC88BA6NC98 1476 aa17.81■□□□□ 0.44
SCN2B-201ENST00000278947 ARXQ96QS3 562 aa17.79■□□□□ 0.44
SCN2B-201ENST00000278947 TOP2AP11388 1531 aaKnown RBP17.79■□□□□ 0.44
SCN2B-201ENST00000278947 TNIKQ9UKE5 1360 aa17.78■□□□□ 0.44
SCN2B-201ENST00000278947 CEP162Q5TB80 1403 aa17.77■□□□□ 0.44
SCN2B-201ENST00000278947 HSP90AA1P07900 732 aaKnown RBP17.77■□□□□ 0.44
SCN2B-201ENST00000278947 CCNB3Q8WWL7 1395 aa17.77■□□□□ 0.44
SCN2B-201ENST00000278947 RRP7BPQ9NSQ0 103 aa17.76■□□□□ 0.43
SCN2B-201ENST00000278947 HDGFP51858 240 aaKnown RBP17.75■□□□□ 0.43
SCN2B-201ENST00000278947 KDM2AQ9Y2K7 1162 aa17.75■□□□□ 0.43
SCN2B-201ENST00000278947 KANK1Q14678 1352 aa17.74■□□□□ 0.43
SCN2B-201ENST00000278947 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
SCN2B-201ENST00000278947 ATAD2BQ9ULI0 1458 aa17.74■□□□□ 0.43
SCN2B-201ENST00000278947 HAP1P54257 671 aaPredicted RBP17.72■□□□□ 0.43
SCN2B-201ENST00000278947 TNNT2P45379 298 aaPredicted RBP17.71■□□□□ 0.43
SCN2B-201ENST00000278947 ANP32EQ9BTT0 268 aa17.7■□□□□ 0.42
SCN2B-201ENST00000278947 UPF2Q9HAU5 1272 aaKnown RBP17.68■□□□□ 0.42
SCN2B-201ENST00000278947 TDRD9Q8NDG6 1382 aaKnown RBP17.68■□□□□ 0.42
SCN2B-201ENST00000278947 SMARCA4P51532 1647 aa17.66■□□□□ 0.42
SCN2B-201ENST00000278947 CDCA8Q53HL2 280 aa17.64■□□□□ 0.41
SCN2B-201ENST00000278947 FANCD2Q9BXW9 1451 aa17.61■□□□□ 0.41
SCN2B-201ENST00000278947 ZBTB7CA1YPR0 619 aa17.6■□□□□ 0.41
SCN2B-201ENST00000278947 WDR43Q15061 677 aaKnown RBP eCLIP17.59■□□□□ 0.41
SCN2B-201ENST00000278947 A0A0G2JS52 829 aa17.59■□□□□ 0.41
SCN2B-201ENST00000278947 OSCARQ8IYS5 282 aa17.59■□□□□ 0.41
SCN2B-201ENST00000278947 EFCAB2Q5VUJ9 269 aa17.58■□□□□ 0.4
SCN2B-201ENST00000278947 MLECQ14165 292 aa17.57■□□□□ 0.4
SCN2B-201ENST00000278947 WIZO95785 1651 aa17.57■□□□□ 0.4
SCN2B-201ENST00000278947 FMN1Q68DA7 1419 aa17.57■□□□□ 0.4
SCN2B-201ENST00000278947 RGL3Q3MIN7 710 aa17.56■□□□□ 0.4
SCN2B-201ENST00000278947 TRIM44Q96DX7 344 aaPredicted RBP17.55■□□□□ 0.4
SCN2B-201ENST00000278947 RTN4Q9NQC3 1192 aaKnown RBP17.55■□□□□ 0.4
SCN2B-201ENST00000278947 POGKQ9P215 609 aa17.55■□□□□ 0.4
SCN2B-201ENST00000278947 CCDC136Q96JN2 1154 aa17.54■□□□□ 0.4
SCN2B-201ENST00000278947 EIF4G2P78344 907 aaKnown RBP eCLIP17.53■□□□□ 0.4
SCN2B-201ENST00000278947 TMC1Q8TDI8 760 aa17.53■□□□□ 0.4
SCN2B-201ENST00000278947 HNRNPUQ00839 825 aaKnown RBP eCLIP17.52■□□□□ 0.4
SCN2B-201ENST00000278947 SENP3Q9H4L4 574 aaPredicted RBP17.51■□□□□ 0.39
SCN2B-201ENST00000278947 CDK11BP21127 795 aaKnown RBP17.5■□□□□ 0.39
SCN2B-201ENST00000278947 RAPGEF2Q9Y4G8 1499 aa17.49■□□□□ 0.39
SCN2B-201ENST00000278947 NAP1L5Q96NT1 182 aaPredicted RBP17.49■□□□□ 0.39
SCN2B-201ENST00000278947 CFAP53Q96M91 514 aa17.48■□□□□ 0.39
SCN2B-201ENST00000278947 ERICH6BQ5W0A0 696 aa17.48■□□□□ 0.39
SCN2B-201ENST00000278947 JPH4Q96JJ6 628 aa17.48■□□□□ 0.39
SCN2B-201ENST00000278947 PLEKHG5O94827 1062 aa17.46■□□□□ 0.39
SCN2B-201ENST00000278947 ARHGAP35Q9NRY4 1499 aa17.45■□□□□ 0.38
SCN2B-201ENST00000278947 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.45■□□□□ 0.38
SCN2B-201ENST00000278947 NCAPD3P42695 1498 aa17.44■□□□□ 0.38
SCN2B-201ENST00000278947 GGT6Q6P531 493 aa17.44■□□□□ 0.38
SCN2B-201ENST00000278947 RSPH4AQ5TD94 716 aa17.42■□□□□ 0.38
SCN2B-201ENST00000278947 LMOD2Q6P5Q4 547 aa17.42■□□□□ 0.38
SCN2B-201ENST00000278947 DDX10Q13206 875 aaKnown RBP17.4■□□□□ 0.38
SCN2B-201ENST00000278947 CARD11Q9BXL7 1154 aa17.4■□□□□ 0.38
SCN2B-201ENST00000278947 FAM9BQ8IZU0 186 aa17.39■□□□□ 0.37
SCN2B-201ENST00000278947 KNSTRNQ9Y448 316 aa17.38■□□□□ 0.37
SCN2B-201ENST00000278947 DDRGK1Q96HY6 314 aa17.38■□□□□ 0.37
SCN2B-201ENST00000278947 CYB5RLQ6IPT4 315 aa17.38■□□□□ 0.37
SCN2B-201ENST00000278947 PTPRGP23470 1445 aa17.37■□□□□ 0.37
SCN2B-201ENST00000278947 CCDC18Q5T9S5 1454 aa17.36■□□□□ 0.37
SCN2B-201ENST00000278947 IRX6P78412 446 aaPredicted RBP17.36■□□□□ 0.37
SCN2B-201ENST00000278947 ANKRD30AQ9BXX3 1397 aa17.36■□□□□ 0.37
SCN2B-201ENST00000278947 AMER1Q5JTC6 1135 aaPredicted RBP17.34■□□□□ 0.37
SCN2B-201ENST00000278947 VPS8Q8N3P4 1428 aa17.34■□□□□ 0.37
SCN2B-201ENST00000278947 EID1Q9Y6B2 187 aa17.33■□□□□ 0.37
SCN2B-201ENST00000278947 DNTTIP2Q5QJE6 756 aaKnown RBP17.33■□□□□ 0.36
SCN2B-201ENST00000278947 SPAG9O60271 1321 aaKnown RBP17.32■□□□□ 0.36
SCN2B-201ENST00000278947 NUDCQ9Y266 331 aa17.32■□□□□ 0.36
SCN2B-201ENST00000278947 GAPVD1Q14C86 1478 aa17.32■□□□□ 0.36
SCN2B-201ENST00000278947 MRS2Q9HD23 443 aa17.32■□□□□ 0.36
SCN2B-201ENST00000278947 MYH16Q9H6N6 1097 aa17.31■□□□□ 0.36
SCN2B-201ENST00000278947 BECN1Q14457 450 aa17.3■□□□□ 0.36
SCN2B-201ENST00000278947 SALL2Q9Y467 1007 aaPredicted RBP17.3■□□□□ 0.36
SCN2B-201ENST00000278947 PTMAP06454 111 aaKnown RBP17.3■□□□□ 0.36
SCN2B-201ENST00000278947 PPM1GO15355 546 aaPredicted RBP17.28■□□□□ 0.36
SCN2B-201ENST00000278947 AEBP2Q6ZN18 517 aaPredicted RBP17.27■□□□□ 0.36
SCN2B-201ENST00000278947 PNNQ9H307 717 aaKnown RBP17.27■□□□□ 0.36
SCN2B-201ENST00000278947 FGD5Q6ZNL6 1462 aa17.26■□□□□ 0.35
SCN2B-201ENST00000278947 MRC2Q9UBG0 1479 aa17.26■□□□□ 0.35
SCN2B-201ENST00000278947 KIF3BO15066 747 aa17.25■□□□□ 0.35
SCN2B-201ENST00000278947 TMF1P82094 1093 aa17.25■□□□□ 0.35
SCN2B-201ENST00000278947 GOLGA6L22H0YM25 854 aa17.25■□□□□ 0.35
SCN2B-201ENST00000278947 MAPK8IP3Q9UPT6 1336 aa17.24■□□□□ 0.35
SCN2B-201ENST00000278947 NCLP19338 710 aaKnown RBP17.24■□□□□ 0.35
SCN2B-201ENST00000278947 CC2D2AQ9P2K1 1620 aa17.24■□□□□ 0.35
SCN2B-201ENST00000278947 DCAF11Q8TEB1 546 aa17.23■□□□□ 0.35
SCN2B-201ENST00000278947 WASHC2CQ9Y4E1 1318 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms