RNA–Protein interactions for RNA: ENST00000278193.6

LIN7C-201, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN7C, Length 4,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-201ENST00000278193 BCL11BQ9C0K0 894 aaPredicted RBP9.27□□□□□ -0.93
LIN7C-201ENST00000278193 PSMD1Q99460 953 aa9.26□□□□□ -0.93
LIN7C-201ENST00000278193 SENP3Q9H4L4 574 aaPredicted RBP9.25□□□□□ -0.93
LIN7C-201ENST00000278193 CCDC136Q96JN2 1154 aa9.24□□□□□ -0.93
LIN7C-201ENST00000278193 AEBP1Q8IUX7 1158 aa9.24□□□□□ -0.93
LIN7C-201ENST00000278193 ZNF526Q8TF50 670 aaPredicted RBP9.24□□□□□ -0.93
LIN7C-201ENST00000278193 NAP1L5Q96NT1 182 aaPredicted RBP9.24□□□□□ -0.93
LIN7C-201ENST00000278193 ZMYND15Q9H091 742 aa9.23□□□□□ -0.93
LIN7C-201ENST00000278193 PPP6R1Q9UPN7 881 aa9.22□□□□□ -0.93
LIN7C-201ENST00000278193 CLSTN1O94985 981 aa9.19□□□□□ -0.94
LIN7C-201ENST00000278193 PTMSP20962 102 aa9.17□□□□□ -0.94
LIN7C-201ENST00000278193 ARID3CA6NKF2 412 aa9.16□□□□□ -0.94
LIN7C-201ENST00000278193 CLSPNQ9HAW4 1339 aa9.16□□□□□ -0.94
LIN7C-201ENST00000278193 APBB1O00213 710 aa9.16□□□□□ -0.94
LIN7C-201ENST00000278193 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.15□□□□□ -0.95
LIN7C-201ENST00000278193 ZNF592Q92610 1267 aa9.14□□□□□ -0.95
LIN7C-201ENST00000278193 GLIPR1L2Q4G1C9 344 aa9.14□□□□□ -0.95
LIN7C-201ENST00000278193 ECM2O94769 699 aaPredicted RBP9.14□□□□□ -0.95
LIN7C-201ENST00000278193 TMCO4Q5TGY1 634 aa9.14□□□□□ -0.95
LIN7C-201ENST00000278193 FOXD4L5Q5VV16 416 aaPredicted RBP9.13□□□□□ -0.95
LIN7C-201ENST00000278193 FOXD4L4Q8WXT5 416 aaPredicted RBP9.13□□□□□ -0.95
LIN7C-201ENST00000278193 IRX6P78412 446 aaPredicted RBP9.13□□□□□ -0.95
LIN7C-201ENST00000278193 BRPF1P55201 1214 aaPredicted RBP9.12□□□□□ -0.95
LIN7C-201ENST00000278193 E9PSI1 815 aa9.11□□□□□ -0.95
LIN7C-201ENST00000278193 NECTIN2Q92692 538 aa9.11□□□□□ -0.95
LIN7C-201ENST00000278193 MTMR7Q9Y216 660 aa9.11□□□□□ -0.95
LIN7C-201ENST00000278193 FGD1P98174 961 aa9.11□□□□□ -0.95
LIN7C-201ENST00000278193 TICAM2Q86XR7 235 aa9.1□□□□□ -0.95
LIN7C-201ENST00000278193 NPM1P06748 294 aaKnown RBP eCLIP9.1□□□□□ -0.95
LIN7C-201ENST00000278193 NCLP19338 710 aaKnown RBP9.09□□□□□ -0.95
LIN7C-201ENST00000278193 CWC22Q9HCG8 908 aaKnown RBP9.07□□□□□ -0.96
LIN7C-201ENST00000278193 PKD2Q13563 968 aa9.06□□□□□ -0.96
LIN7C-201ENST00000278193 ZNF428Q96B54 188 aa9.05□□□□□ -0.96
LIN7C-201ENST00000278193 CHGAP10645 457 aaKnown RBP9.05□□□□□ -0.96
LIN7C-201ENST00000278193 ZFP91Q96JP5 570 aaPredicted RBP9.04□□□□□ -0.96
LIN7C-201ENST00000278193 YTHDC1Q96MU7 727 aaKnown RBP9.04□□□□□ -0.96
LIN7C-201ENST00000278193 CCDC180Q9P1Z9 1646 aa9.03□□□□□ -0.96
LIN7C-201ENST00000278193 VASPP50552 380 aaPredicted RBP9.03□□□□□ -0.96
LIN7C-201ENST00000278193 TRHP20396 242 aaPredicted RBP9.03□□□□□ -0.96
LIN7C-201ENST00000278193 WDR70Q9NW82 654 aa9.02□□□□□ -0.96
LIN7C-201ENST00000278193 FAM177A1Q8N128 213 aaPredicted RBP9□□□□□ -0.97
LIN7C-201ENST00000278193 GZF1Q9H116 711 aaPredicted RBP9□□□□□ -0.97
LIN7C-201ENST00000278193 PLCD4Q9BRC7 762 aa8.99□□□□□ -0.97
LIN7C-201ENST00000278193 PABPN1Q86U42 306 aaKnown RBP eCLIP8.99□□□□□ -0.97
LIN7C-201ENST00000278193 MFAP1P55081 439 aaKnown RBP8.99□□□□□ -0.97
LIN7C-201ENST00000278193 CERS3Q8IU89 383 aa8.98□□□□□ -0.97
LIN7C-201ENST00000278193 RSPH4AQ5TD94 716 aa8.98□□□□□ -0.97
LIN7C-201ENST00000278193 FBXW7Q969H0 707 aa8.98□□□□□ -0.97
LIN7C-201ENST00000278193 BRPF3Q9ULD4 1205 aa8.98□□□□□ -0.97
LIN7C-201ENST00000278193 LMOD2Q6P5Q4 547 aa8.97□□□□□ -0.97
LIN7C-201ENST00000278193 C1orf115Q9H7X2 142 aa8.93□□□□□ -0.98
LIN7C-201ENST00000278193 IFNLR1Q8IU57 520 aaPredicted RBP8.92□□□□□ -0.98
LIN7C-201ENST00000278193 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.89□□□□□ -0.99
LIN7C-201ENST00000278193 PRDM10Q9NQV6 1147 aa8.89□□□□□ -0.99
LIN7C-201ENST00000278193 SCAF1Q9H7N4 1312 aaKnown RBP8.88□□□□□ -0.99
LIN7C-201ENST00000278193 RTL5Q5HYW3 569 aaPredicted RBP8.88□□□□□ -0.99
LIN7C-201ENST00000278193 RB1CC1Q8TDY2 1594 aa8.88□□□□□ -0.99
LIN7C-201ENST00000278193 RGS22Q8NE09 1264 aa8.87□□□□□ -0.99
LIN7C-201ENST00000278193 CCDC82Q8N4S0 544 aa8.87□□□□□ -0.99
LIN7C-201ENST00000278193 IL27Q8NEV9 243 aa8.87□□□□□ -0.99
LIN7C-201ENST00000278193 SETQ01105 290 aaPredicted RBP8.87□□□□□ -0.99
LIN7C-201ENST00000278193 KDM4AO75164 1064 aa8.86□□□□□ -0.99
LIN7C-201ENST00000278193 NOL8Q76FK4 1167 aaKnown RBP8.86□□□□□ -0.99
LIN7C-201ENST00000278193 CCDC27Q2M243 656 aa8.86□□□□□ -0.99
LIN7C-201ENST00000278193 SLC24A3Q9HC58 644 aa8.86□□□□□ -0.99
LIN7C-201ENST00000278193 ANO8Q9HCE9 1232 aaPredicted RBP8.85□□□□□ -0.99
LIN7C-201ENST00000278193 ZNF692Q9BU19 519 aaPredicted RBP8.84□□□□□ -0.99
LIN7C-201ENST00000278193 ATXN8OSP0DMR3 200 aa8.83□□□□□ -1
LIN7C-201ENST00000278193 PTMAP06454 111 aaKnown RBP8.83□□□□□ -1
LIN7C-201ENST00000278193 CC2D2BQ6DHV5 1058 aa8.83□□□□□ -1
LIN7C-201ENST00000278193 PIAS4Q8N2W9 510 aaPredicted RBP8.82□□□□□ -1
LIN7C-201ENST00000278193 RGL2O15211 777 aa8.81□□□□□ -1
LIN7C-201ENST00000278193 ANAPC15P60006 121 aa8.81□□□□□ -1
LIN7C-201ENST00000278193 TMED8Q6PL24 325 aaPredicted RBP8.81□□□□□ -1
LIN7C-201ENST00000278193 CNPY4Q8N129 248 aa8.81□□□□□ -1
LIN7C-201ENST00000278193 CCER1Q8TC90 406 aaPredicted RBP8.81□□□□□ -1
LIN7C-201ENST00000278193 AAMPQ13685 434 aa8.8□□□□□ -1
LIN7C-201ENST00000278193 PPP1R1BQ9UD71 204 aaPredicted RBP8.8□□□□□ -1
LIN7C-201ENST00000278193 TEX2Q8IWB9 1127 aa8.79□□□□□ -1
LIN7C-201ENST00000278193 GPATCH11Q8N954 259 aa8.79□□□□□ -1
LIN7C-201ENST00000278193 NEFMP07197 916 aa8.79□□□□□ -1
LIN7C-201ENST00000278193 OS9Q13438 667 aaPredicted RBP8.79□□□□□ -1
LIN7C-201ENST00000278193 WWC1Q8IX03 1113 aa8.78□□□□□ -1
LIN7C-201ENST00000278193 CCDC97Q96F63 343 aaPredicted RBP8.78□□□□□ -1
LIN7C-201ENST00000278193 NACADO15069 1562 aa8.78□□□□□ -1
LIN7C-201ENST00000278193 P3H3Q8IVL6 736 aa8.77□□□□□ -1.01
LIN7C-201ENST00000278193 ANP32EQ9BTT0 268 aa8.77□□□□□ -1.01
LIN7C-201ENST00000278193 LAS1LQ9Y4W2 734 aaKnown RBP8.77□□□□□ -1.01
LIN7C-201ENST00000278193 FAM50AQ14320 339 aaKnown RBP8.76□□□□□ -1.01
LIN7C-201ENST00000278193 ZNF316A6NFI3 1004 aaPredicted RBP8.76□□□□□ -1.01
LIN7C-201ENST00000278193 DNAJC5Q9H3Z4 198 aa8.75□□□□□ -1.01
LIN7C-201ENST00000278193 TRIM41Q8WV44 630 aa8.74□□□□□ -1.01
LIN7C-201ENST00000278193 RBM10P98175 930 aaKnown RBP8.74□□□□□ -1.01
LIN7C-201ENST00000278193 PRDM16Q9HAZ2 1276 aa8.74□□□□□ -1.01
LIN7C-201ENST00000278193 SPOCK2Q92563 424 aa8.73□□□□□ -1.01
LIN7C-201ENST00000278193 TRAIPQ9BWF2 469 aa8.73□□□□□ -1.01
LIN7C-201ENST00000278193 HSP90AB4PQ58FF6 505 aa8.72□□□□□ -1.01
LIN7C-201ENST00000278193 ERICH6BQ5W0A0 696 aa8.72□□□□□ -1.01
LIN7C-201ENST00000278193 ANKRD13AQ8IZ07 590 aa8.72□□□□□ -1.01
LIN7C-201ENST00000278193 CIZ1Q9ULV3 898 aaPredicted RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms