RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 ADAMTS12P58397 1594 aa22.32■■□□□ 1.16
MRPS28-201ENST00000276585 MAPKBP1O60336 1514 aa22.31■■□□□ 1.16
MRPS28-201ENST00000276585 TSPOAP1O95153 1857 aa22.27■■□□□ 1.16
MRPS28-201ENST00000276585 HECW2Q9P2P5 1572 aa22.26■■□□□ 1.15
MRPS28-201ENST00000276585 ADGRL1O94910 1474 aa22.26■■□□□ 1.15
MRPS28-201ENST00000276585 FHAD1B1AJZ9 1412 aa22.24■■□□□ 1.15
MRPS28-201ENST00000276585 JPH4Q96JJ6 628 aa22.23■■□□□ 1.15
MRPS28-201ENST00000276585 SUPT5HO00267 1087 aaKnown RBP22.18■■□□□ 1.14
MRPS28-201ENST00000276585 FBXO41Q8TF61 875 aa22.17■■□□□ 1.14
MRPS28-201ENST00000276585 ADCY10Q96PN6 1610 aa22.16■■□□□ 1.14
MRPS28-201ENST00000276585 WRNQ14191 1432 aaPredicted RBP eCLIP22.11■■□□□ 1.13
MRPS28-201ENST00000276585 ERICH3Q5RHP9 1530 aa22.06■■□□□ 1.12
MRPS28-201ENST00000276585 RUSC2Q8N2Y8 1516 aa22.02■■□□□ 1.12
MRPS28-201ENST00000276585 PPRC1Q5VV67 1664 aaKnown RBP21.94■■□□□ 1.1
MRPS28-201ENST00000276585 TTBK1Q5TCY1 1321 aaPredicted RBP21.92■■□□□ 1.1
MRPS28-201ENST00000276585 LMTK3Q96Q04 1460 aa21.9■■□□□ 1.1
MRPS28-201ENST00000276585 COL17A1Q9UMD9 1497 aaPredicted RBP21.9■■□□□ 1.1
MRPS28-201ENST00000276585 ASXL2Q76L83 1435 aa21.89■■□□□ 1.09
MRPS28-201ENST00000276585 GLI2P10070 1586 aa21.88■■□□□ 1.09
MRPS28-201ENST00000276585 PLB1Q6P1J6 1458 aa21.87■■□□□ 1.09
MRPS28-201ENST00000276585 BIVM-ERCC5R4GMW8 1640 aa21.86■■□□□ 1.09
MRPS28-201ENST00000276585 PTPRGP23470 1445 aa21.86■■□□□ 1.09
MRPS28-201ENST00000276585 TOP2BQ02880 1626 aa21.85■■□□□ 1.09
MRPS28-201ENST00000276585 ABCC2Q92887 1545 aa21.84■■□□□ 1.09
MRPS28-201ENST00000276585 KIAA0586Q9BVV6 1533 aa21.82■■□□□ 1.08
MRPS28-201ENST00000276585 TEX14Q8IWB6 1497 aa21.8■■□□□ 1.08
MRPS28-201ENST00000276585 CUL7Q14999 1698 aa21.73■■□□□ 1.07
MRPS28-201ENST00000276585 EPRSP07814 1512 aaKnown RBP21.73■■□□□ 1.07
MRPS28-201ENST00000276585 MAP3K4Q9Y6R4 1608 aa21.73■■□□□ 1.07
MRPS28-201ENST00000276585 TNIKQ9UKE5 1360 aa21.72■■□□□ 1.07
MRPS28-201ENST00000276585 SOCS7O14512 581 aa21.68■■□□□ 1.06
MRPS28-201ENST00000276585 CARMIL2Q6F5E8 1435 aa21.68■■□□□ 1.06
MRPS28-201ENST00000276585 UHRF1BP1LA0JNW5 1464 aa21.65■■□□□ 1.06
MRPS28-201ENST00000276585 ILDR2Q71H61 639 aa21.64■■□□□ 1.05
MRPS28-201ENST00000276585 UACAQ9BZF9 1416 aa21.63■■□□□ 1.05
MRPS28-201ENST00000276585 DISP3Q9P2K9 1392 aa21.62■■□□□ 1.05
MRPS28-201ENST00000276585 KIF21BO75037 1637 aa21.59■■□□□ 1.05
MRPS28-201ENST00000276585 KDM5BQ9UGL1 1544 aa21.57■■□□□ 1.04
MRPS28-201ENST00000276585 IGF1RP08069 1367 aa21.55■■□□□ 1.04
MRPS28-201ENST00000276585 PTPRMP28827 1452 aa21.55■■□□□ 1.04
MRPS28-201ENST00000276585 ZCCHC11Q5TAX3 1644 aaKnown RBP21.54■■□□□ 1.04
MRPS28-201ENST00000276585 PCF11O94913 1555 aaKnown RBP21.51■■□□□ 1.03
MRPS28-201ENST00000276585 CD109Q6YHK3 1445 aa21.5■■□□□ 1.03
MRPS28-201ENST00000276585 WDR7Q9Y4E6 1490 aa21.5■■□□□ 1.03
MRPS28-201ENST00000276585 MAGI3Q5TCQ9 1506 aa21.48■■□□□ 1.03
MRPS28-201ENST00000276585 CERKQ8TCT0 537 aa21.47■■□□□ 1.03
MRPS28-201ENST00000276585 IQGAP2Q13576 1575 aa21.47■■□□□ 1.03
MRPS28-201ENST00000276585 KIF27Q86VH2 1401 aa21.46■■□□□ 1.03
MRPS28-201ENST00000276585 KCNH8Q96L42 1107 aa21.44■■□□□ 1.02
MRPS28-201ENST00000276585 ADAMTSL3P82987 1691 aa21.44■■□□□ 1.02
MRPS28-201ENST00000276585 DISP1Q96F81 1524 aa21.43■■□□□ 1.02
MRPS28-201ENST00000276585 CARMIL1Q5VZK9 1371 aa21.42■■□□□ 1.02
MRPS28-201ENST00000276585 CFAP43Q8NDM7 1665 aa21.41■■□□□ 1.02
MRPS28-201ENST00000276585 HSPA2P54652 639 aa21.38■■□□□ 1.01
MRPS28-201ENST00000276585 ARID4BQ4LE39 1312 aaPredicted RBP21.36■■□□□ 1.01
MRPS28-201ENST00000276585 MADDQ8WXG6 1647 aa21.33■■□□□ 1.01
MRPS28-201ENST00000276585 ARAP3Q8WWN8 1544 aa21.33■■□□□ 1
MRPS28-201ENST00000276585 SPATA31D1Q6ZQQ2 1576 aa21.31■■□□□ 1
MRPS28-201ENST00000276585 BCORL1Q5H9F3 1711 aa21.3■■□□□ 1
MRPS28-201ENST00000276585 PLPPR3Q6T4P5 718 aa21.3■■□□□ 1
MRPS28-201ENST00000276585 KIAA0556O60303 1618 aa21.29■■□□□ 1
MRPS28-201ENST00000276585 UGGT2Q9NYU1 1516 aa21.28■■□□□ 1
MRPS28-201ENST00000276585 RAPGEF3O95398 923 aa21.25■□□□□ 0.99
MRPS28-201ENST00000276585 RIMS1Q86UR5 1692 aaKnown RBP21.24■□□□□ 0.99
MRPS28-201ENST00000276585 PHLDB1Q86UU1 1377 aa21.2■□□□□ 0.98
MRPS28-201ENST00000276585 ABCA8O94911 1581 aa21.14■□□□□ 0.97
MRPS28-201ENST00000276585 ARID3CA6NKF2 412 aa21.12■□□□□ 0.97
MRPS28-201ENST00000276585 NEO1Q92859 1461 aa21.09■□□□□ 0.97
MRPS28-201ENST00000276585 RAPGEF2Q9Y4G8 1499 aa21.09■□□□□ 0.97
MRPS28-201ENST00000276585 FRMPD1Q5SYB0 1578 aa21.08■□□□□ 0.97
MRPS28-201ENST00000276585 POGZQ7Z3K3 1410 aa21.07■□□□□ 0.96
MRPS28-201ENST00000276585 ARHGEF40Q8TER5 1519 aa21.07■□□□□ 0.96
MRPS28-201ENST00000276585 ABCA9Q8IUA7 1624 aa21.06■□□□□ 0.96
MRPS28-201ENST00000276585 GOLGA3Q08378 1498 aa21.06■□□□□ 0.96
MRPS28-201ENST00000276585 DMRT2Q9Y5R5 561 aa21.05■□□□□ 0.96
MRPS28-201ENST00000276585 SENP3Q9H4L4 574 aaPredicted RBP21.04■□□□□ 0.96
MRPS28-201ENST00000276585 FANCAO15360 1455 aa21.02■□□□□ 0.96
MRPS28-201ENST00000276585 MLECQ14165 292 aa21.02■□□□□ 0.96
MRPS28-201ENST00000276585 YEATS2Q9ULM3 1422 aa21.02■□□□□ 0.96
MRPS28-201ENST00000276585 AKNAQ7Z591 1439 aa20.99■□□□□ 0.95
MRPS28-201ENST00000276585 FAM9AQ8IZU1 332 aaPredicted RBP20.99■□□□□ 0.95
MRPS28-201ENST00000276585 ATP10BO94823 1461 aa20.99■□□□□ 0.95
MRPS28-201ENST00000276585 DENND4BO75064 1496 aaPredicted RBP20.97■□□□□ 0.95
MRPS28-201ENST00000276585 FER1L4A9Z1Z3 1794 aa20.94■□□□□ 0.94
MRPS28-201ENST00000276585 PREX1Q8TCU6 1659 aa20.93■□□□□ 0.94
MRPS28-201ENST00000276585 CTTNBP2Q8WZ74 1663 aa20.93■□□□□ 0.94
MRPS28-201ENST00000276585 TTC37Q6PGP7 1564 aa20.93■□□□□ 0.94
MRPS28-201ENST00000276585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.92■□□□□ 0.94
MRPS28-201ENST00000276585 HNRNPUL2Q1KMD3 747 aaKnown RBP20.92■□□□□ 0.94
MRPS28-201ENST00000276585 STRCQ7RTU9 1775 aa20.9■□□□□ 0.94
MRPS28-201ENST00000276585 RICTORQ6R327 1708 aa20.9■□□□□ 0.94
MRPS28-201ENST00000276585 ZFYVE16Q7Z3T8 1539 aa20.89■□□□□ 0.94
MRPS28-201ENST00000276585 PRXQ9BXM0 1461 aa20.89■□□□□ 0.94
MRPS28-201ENST00000276585 FHOD3Q2V2M9 1422 aa20.89■□□□□ 0.94
MRPS28-201ENST00000276585 SIGLEC1Q9BZZ2 1709 aa20.88■□□□□ 0.93
MRPS28-201ENST00000276585 CEBPAP49715 358 aaPredicted RBP20.88■□□□□ 0.93
MRPS28-201ENST00000276585 EFCAB5A4FU69 1503 aa20.88■□□□□ 0.93
MRPS28-201ENST00000276585 UHRF1BP1Q6BDS2 1440 aa20.87■□□□□ 0.93
MRPS28-201ENST00000276585 P3H3Q8IVL6 736 aa20.86■□□□□ 0.93
MRPS28-201ENST00000276585 PTPRTO14522 1441 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms