RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 DEKP35659 375 aaKnown RBP14.68□□□□□ -0.06
CHFR-201ENST00000266880 NOP58Q9Y2X3 529 aaKnown RBP14.68□□□□□ -0.06
CHFR-201ENST00000266880 MRS2Q9HD23 443 aa14.67□□□□□ -0.06
CHFR-201ENST00000266880 WDR43Q15061 677 aaKnown RBP eCLIP14.67□□□□□ -0.06
CHFR-201ENST00000266880 PPM1GO15355 546 aaPredicted RBP14.66□□□□□ -0.06
CHFR-201ENST00000266880 CHAF1AQ13111 956 aaPredicted RBP14.65□□□□□ -0.06
CHFR-201ENST00000266880 GOLGA6L6A8MZA4 724 aa14.64□□□□□ -0.07
CHFR-201ENST00000266880 MIER1Q8N108 512 aa14.64□□□□□ -0.07
CHFR-201ENST00000266880 ZBTB7CA1YPR0 619 aa14.64□□□□□ -0.07
CHFR-201ENST00000266880 VSIG10Q8N0Z9 540 aa14.63□□□□□ -0.07
CHFR-201ENST00000266880 TAOK2Q9UL54 1235 aa14.63□□□□□ -0.07
CHFR-201ENST00000266880 SENP3-EIF4A1A0A087X0R7 540 aa14.6□□□□□ -0.07
CHFR-201ENST00000266880 ZNF777Q9ULD5 760 aaPredicted RBP14.59□□□□□ -0.07
CHFR-201ENST00000266880 PTMSP20962 102 aa14.59□□□□□ -0.07
CHFR-201ENST00000266880 CSRNP3Q8WYN3 585 aa14.59□□□□□ -0.07
CHFR-201ENST00000266880 TNNT3P45378 269 aaPredicted RBP14.59□□□□□ -0.07
CHFR-201ENST00000266880 HAP1P54257 671 aaPredicted RBP14.58□□□□□ -0.08
CHFR-201ENST00000266880 A0A0G2JS52 829 aa14.58□□□□□ -0.08
CHFR-201ENST00000266880 CHGAP10645 457 aaKnown RBP14.57□□□□□ -0.08
CHFR-201ENST00000266880 MSNP26038 577 aaKnown RBP14.57□□□□□ -0.08
CHFR-201ENST00000266880 CASC1Q6TDU7 716 aa14.57□□□□□ -0.08
CHFR-201ENST00000266880 NCBP3Q53F19 620 aaKnown RBP14.56□□□□□ -0.08
CHFR-201ENST00000266880 P3H3Q8IVL6 736 aa14.56□□□□□ -0.08
CHFR-201ENST00000266880 HSP90AB1P08238 724 aaKnown RBP14.55□□□□□ -0.08
CHFR-201ENST00000266880 PLPPR3Q6T4P5 718 aa14.54□□□□□ -0.08
CHFR-201ENST00000266880 NRDCO43847 1150 aa14.53□□□□□ -0.08
CHFR-201ENST00000266880 L1TD1Q5T7N2 865 aaKnown RBP14.53□□□□□ -0.08
CHFR-201ENST00000266880 DRC7Q8IY82 874 aa14.53□□□□□ -0.08
CHFR-201ENST00000266880 CALRP27797 417 aaKnown RBP14.51□□□□□ -0.09
CHFR-201ENST00000266880 STAG3Q9UJ98 1225 aa14.51□□□□□ -0.09
CHFR-201ENST00000266880 RGS3P49796 1198 aa14.5□□□□□ -0.09
CHFR-201ENST00000266880 HIRIP3Q9BW71 556 aaPredicted RBP14.5□□□□□ -0.09
CHFR-201ENST00000266880 APPP05067 770 aa14.48□□□□□ -0.09
CHFR-201ENST00000266880 SPRYD3Q8NCJ5 442 aa14.48□□□□□ -0.09
CHFR-201ENST00000266880 FBLN2P98095 1184 aa14.47□□□□□ -0.09
CHFR-201ENST00000266880 SUPT16HQ9Y5B9 1047 aaKnown RBP14.47□□□□□ -0.09
CHFR-201ENST00000266880 FTSJ3Q8IY81 847 aaKnown RBP14.47□□□□□ -0.09
CHFR-201ENST00000266880 PDE4CQ08493 712 aa14.46□□□□□ -0.09
CHFR-201ENST00000266880 NOC3LQ8WTT2 800 aaKnown RBP14.46□□□□□ -0.1
CHFR-201ENST00000266880 PLEKHG5O94827 1062 aa14.45□□□□□ -0.1
CHFR-201ENST00000266880 CLSTN1O94985 981 aa14.45□□□□□ -0.1
CHFR-201ENST00000266880 NAP1L2Q9ULW6 460 aaPredicted RBP14.45□□□□□ -0.1
CHFR-201ENST00000266880 KDM2AQ9Y2K7 1162 aa14.43□□□□□ -0.1
CHFR-201ENST00000266880 HSP90AA2PQ14568 343 aaPredicted RBP14.43□□□□□ -0.1
CHFR-201ENST00000266880 HSCBQ8IWL3 235 aa14.41□□□□□ -0.1
CHFR-201ENST00000266880 FGD1P98174 961 aa14.41□□□□□ -0.1
CHFR-201ENST00000266880 PNNQ9H307 717 aaKnown RBP14.41□□□□□ -0.1
CHFR-201ENST00000266880 ESF1Q9H501 851 aaKnown RBP14.41□□□□□ -0.1
CHFR-201ENST00000266880 GOLGA6L4A6NEF3 574 aa14.4□□□□□ -0.1
CHFR-201ENST00000266880 SENP3Q9H4L4 574 aaPredicted RBP14.4□□□□□ -0.1
CHFR-201ENST00000266880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.38□□□□□ -0.114e-7■□□□□ 9.3
CHFR-201ENST00000266880 PPP4R2Q9NY27 417 aa14.38□□□□□ -0.11
CHFR-201ENST00000266880 RSPH6AQ9H0K4 717 aa14.36□□□□□ -0.11
CHFR-201ENST00000266880 KIAA2012Q0VF49 1180 aa14.36□□□□□ -0.11
CHFR-201ENST00000266880 GZF1Q9H116 711 aaPredicted RBP14.36□□□□□ -0.11
CHFR-201ENST00000266880 B4GALNT3Q6L9W6 998 aa14.35□□□□□ -0.11
CHFR-201ENST00000266880 KCNJ4P48050 445 aa14.35□□□□□ -0.11
CHFR-201ENST00000266880 DCAF1Q9Y4B6 1507 aa14.33□□□□□ -0.12
CHFR-201ENST00000266880 C14orf37Q86TY3 774 aa14.33□□□□□ -0.12
CHFR-201ENST00000266880 GOLGA6L1Q8N7Z2 621 aa14.32□□□□□ -0.12
CHFR-201ENST00000266880 ANO8Q9HCE9 1232 aaPredicted RBP14.32□□□□□ -0.12
CHFR-201ENST00000266880 CHIC2Q9UKJ5 165 aa14.32□□□□□ -0.12
CHFR-201ENST00000266880 TIMELESSQ9UNS1 1208 aa14.3□□□□□ -0.12
CHFR-201ENST00000266880 OS9Q13438 667 aaPredicted RBP14.29□□□□□ -0.12
CHFR-201ENST00000266880 FRAT1Q92837 279 aaPredicted RBP14.28□□□□□ -0.12
CHFR-201ENST00000266880 SETQ01105 290 aaPredicted RBP14.27□□□□□ -0.12
CHFR-201ENST00000266880 PRM3Q9NNZ6 103 aa14.27□□□□□ -0.12
CHFR-201ENST00000266880 PATL2C9JE40 543 aaKnown RBP14.25□□□□□ -0.13
CHFR-201ENST00000266880 RBM19Q9Y4C8 960 aaKnown RBP14.25□□□□□ -0.13
CHFR-201ENST00000266880 NEUROD2Q15784 382 aa14.24□□□□□ -0.13
CHFR-201ENST00000266880 GNL2Q13823 731 aaKnown RBP14.23□□□□□ -0.13
CHFR-201ENST00000266880 GBP4Q96PP9 640 aa14.22□□□□□ -0.13
CHFR-201ENST00000266880 SLKQ9H2G2 1235 aaPredicted RBP14.22□□□□□ -0.13
CHFR-201ENST00000266880 EIF4G2P78344 907 aaKnown RBP eCLIP14.22□□□□□ -0.13
CHFR-201ENST00000266880 CFAP53Q96M91 514 aa14.2□□□□□ -0.14
CHFR-201ENST00000266880 GOLGA6L3A6NEY3 463 aa14.19□□□□□ -0.14
CHFR-201ENST00000266880 MCCP23508 829 aa14.19□□□□□ -0.14
CHFR-201ENST00000266880 ZNF771Q7L3S4 317 aaPredicted RBP14.18□□□□□ -0.14
CHFR-201ENST00000266880 ISY1Q9ULR0 285 aaKnown RBP14.18□□□□□ -0.14
CHFR-201ENST00000266880 CCDC180Q9P1Z9 1646 aa14.17□□□□□ -0.14
CHFR-201ENST00000266880 KNSTRNQ9Y448 316 aa14.14□□□□□ -0.15
CHFR-201ENST00000266880 GOLGA2Q08379 1002 aa14.13□□□□□ -0.15
CHFR-201ENST00000266880 MAPK8IP3Q9UPT6 1336 aa14.13□□□□□ -0.15
CHFR-201ENST00000266880 USP35Q9P2H5 1018 aa14.13□□□□□ -0.15
CHFR-201ENST00000266880 FBXO3Q9UK99 471 aa14.12□□□□□ -0.15
CHFR-201ENST00000266880 PDIA4P13667 645 aaKnown RBP14.12□□□□□ -0.15
CHFR-201ENST00000266880 SYAP1Q96A49 352 aaPredicted RBP14.12□□□□□ -0.15
CHFR-201ENST00000266880 NPHP1O15259 732 aa14.12□□□□□ -0.15
CHFR-201ENST00000266880 UBE2Q2Q8WVN8 375 aa14.12□□□□□ -0.15
CHFR-201ENST00000266880 HOMEZQ8IX15 550 aa14.11□□□□□ -0.15
CHFR-201ENST00000266880 APBB1O00213 710 aa14.1□□□□□ -0.15
CHFR-201ENST00000266880 ZNF526Q8TF50 670 aaPredicted RBP14.1□□□□□ -0.15
CHFR-201ENST00000266880 TPM4P67936 248 aa14.09□□□□□ -0.15
CHFR-201ENST00000266880 CCAR2Q8N163 923 aaKnown RBP14.09□□□□□ -0.15
CHFR-201ENST00000266880 TAF7LQ5H9L4 462 aa14.09□□□□□ -0.15
CHFR-201ENST00000266880 CREBRFQ8IUR6 639 aa14.08□□□□□ -0.16
CHFR-201ENST00000266880 FOXD4L1Q9NU39 408 aa14.08□□□□□ -0.16
CHFR-201ENST00000266880 PABPN1Q86U42 306 aaKnown RBP eCLIP14.08□□□□□ -0.16
CHFR-201ENST00000266880 CHMP4BQ9H444 224 aaKnown RBP14.08□□□□□ -0.16
CHFR-201ENST00000266880 RRP7BPQ9NSQ0 103 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms