RNA–Protein interactions for RNA: ENST00000265138.3

ARRDC3-201, Transcript of arrestin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARRDC3, Length 4,188 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3-201ENST00000265138 RB1CC1Q8TDY2 1594 aa9.54□□□□□ -0.88
ARRDC3-201ENST00000265138 DHX57Q6P158 1386 aaKnown RBP9.53□□□□□ -0.88
ARRDC3-201ENST00000265138 DDRGK1Q96HY6 314 aa9.53□□□□□ -0.88
ARRDC3-201ENST00000265138 HSP90AA1P07900 732 aaKnown RBP9.52□□□□□ -0.89
ARRDC3-201ENST00000265138 B4GALNT3Q6L9W6 998 aa9.52□□□□□ -0.89
ARRDC3-201ENST00000265138 BRPF3Q9ULD4 1205 aa9.52□□□□□ -0.89
ARRDC3-201ENST00000265138 RSF1Q96T23 1441 aaPredicted RBP9.52□□□□□ -0.89
ARRDC3-201ENST00000265138 RRP9O43818 475 aaKnown RBP9.52□□□□□ -0.89
ARRDC3-201ENST00000265138 LAS1LQ9Y4W2 734 aaKnown RBP9.51□□□□□ -0.89
ARRDC3-201ENST00000265138 ABCC9O60706 1549 aa9.5□□□□□ -0.89
ARRDC3-201ENST00000265138 NPM2Q86SE8 214 aaKnown RBP9.49□□□□□ -0.89
ARRDC3-201ENST00000265138 NAP1L5Q96NT1 182 aaPredicted RBP9.47□□□□□ -0.89
ARRDC3-201ENST00000265138 PPP1R15AO75807 674 aaPredicted RBP9.44□□□□□ -0.9
ARRDC3-201ENST00000265138 PDE4CQ08493 712 aa9.43□□□□□ -0.9
ARRDC3-201ENST00000265138 PNNQ9H307 717 aaKnown RBP9.43□□□□□ -0.9
ARRDC3-201ENST00000265138 L1TD1Q5T7N2 865 aaKnown RBP9.42□□□□□ -0.9
ARRDC3-201ENST00000265138 A0A0U1RQG5 324 aaPredicted RBP9.42□□□□□ -0.9
ARRDC3-201ENST00000265138 GOLGA3Q08378 1498 aa9.42□□□□□ -0.9
ARRDC3-201ENST00000265138 TCERG1O14776 1098 aaKnown RBP9.42□□□□□ -0.9
ARRDC3-201ENST00000265138 FRAT1Q92837 279 aaPredicted RBP9.39□□□□□ -0.91
ARRDC3-201ENST00000265138 NCLP19338 710 aaKnown RBP9.39□□□□□ -0.91
ARRDC3-201ENST00000265138 RBM10P98175 930 aaKnown RBP9.38□□□□□ -0.91
ARRDC3-201ENST00000265138 VPS8Q8N3P4 1428 aa9.37□□□□□ -0.91
ARRDC3-201ENST00000265138 CLIP1P30622 1438 aa9.37□□□□□ -0.91
ARRDC3-201ENST00000265138 NFKBIBQ15653 356 aa9.37□□□□□ -0.91
ARRDC3-201ENST00000265138 FGD1P98174 961 aa9.36□□□□□ -0.91
ARRDC3-201ENST00000265138 MS4A1P11836 297 aa9.35□□□□□ -0.91
ARRDC3-201ENST00000265138 RANGAP1P46060 587 aaPredicted RBP9.35□□□□□ -0.91
ARRDC3-201ENST00000265138 CEP164Q9UPV0 1460 aa9.34□□□□□ -0.91
ARRDC3-201ENST00000265138 ZBED9Q6R2W3 1325 aa9.33□□□□□ -0.92
ARRDC3-201ENST00000265138 PDIA4P13667 645 aaKnown RBP9.33□□□□□ -0.92
ARRDC3-201ENST00000265138 AAMPQ13685 434 aa9.33□□□□□ -0.92
ARRDC3-201ENST00000265138 NACADO15069 1562 aa9.33□□□□□ -0.92
ARRDC3-201ENST00000265138 PDE4AP27815 886 aa9.32□□□□□ -0.92
ARRDC3-201ENST00000265138 FAM9BQ8IZU0 186 aa9.31□□□□□ -0.92
ARRDC3-201ENST00000265138 PDCL3Q9H2J4 239 aa9.31□□□□□ -0.92
ARRDC3-201ENST00000265138 TPM2P07951 284 aa9.3□□□□□ -0.92
ARRDC3-201ENST00000265138 CALD1Q05682 793 aaKnown RBP9.3□□□□□ -0.92
ARRDC3-201ENST00000265138 ZNF326Q5BKZ1 582 aaKnown RBP9.3□□□□□ -0.92
ARRDC3-201ENST00000265138 MRS2Q9HD23 443 aa9.29□□□□□ -0.92
ARRDC3-201ENST00000265138 TNNT2P45379 298 aaPredicted RBP9.28□□□□□ -0.92
ARRDC3-201ENST00000265138 MAP7D2Q96T17 732 aa9.27□□□□□ -0.92
ARRDC3-201ENST00000265138 CLCN1P35523 988 aa9.27□□□□□ -0.93
ARRDC3-201ENST00000265138 HIRIP3Q9BW71 556 aaPredicted RBP9.27□□□□□ -0.93
ARRDC3-201ENST00000265138 BACH2Q9BYV9 841 aa9.27□□□□□ -0.93
ARRDC3-201ENST00000265138 TONSLQ96HA7 1378 aa9.27□□□□□ -0.93
ARRDC3-201ENST00000265138 CENPJQ9HC77 1338 aaPredicted RBP9.26□□□□□ -0.93
ARRDC3-201ENST00000265138 NUDCQ9Y266 331 aa9.26□□□□□ -0.93
ARRDC3-201ENST00000265138 SOGA1O94964 1423 aa9.24□□□□□ -0.93
ARRDC3-201ENST00000265138 TAF7LQ5H9L4 462 aa9.24□□□□□ -0.93
ARRDC3-201ENST00000265138 TRIM44Q96DX7 344 aaPredicted RBP9.24□□□□□ -0.93
ARRDC3-201ENST00000265138 CCNB3Q8WWL7 1395 aa9.24□□□□□ -0.93
ARRDC3-201ENST00000265138 CUX2O14529 1486 aa9.24□□□□□ -0.93
ARRDC3-201ENST00000265138 CNGB1Q14028 1251 aaPredicted RBP9.23□□□□□ -0.93
ARRDC3-201ENST00000265138 SIN3AQ96ST3 1273 aa9.23□□□□□ -0.93
ARRDC3-201ENST00000265138 RRAGDQ9NQL2 400 aaPredicted RBP9.23□□□□□ -0.93
ARRDC3-201ENST00000265138 CCDC88BA6NC98 1476 aa9.23□□□□□ -0.93
ARRDC3-201ENST00000265138 GOLGA6L3A6NEY3 463 aa9.23□□□□□ -0.93
ARRDC3-201ENST00000265138 SMG6Q86US8 1419 aaKnown RBP9.22□□□□□ -0.93
ARRDC3-201ENST00000265138 RAB3GAP2Q9H2M9 1393 aa9.22□□□□□ -0.93
ARRDC3-201ENST00000265138 WDR97A6NE52 1622 aa9.21□□□□□ -0.93
ARRDC3-201ENST00000265138 BECN1Q14457 450 aa9.21□□□□□ -0.93
ARRDC3-201ENST00000265138 ABCC8Q09428 1581 aa9.21□□□□□ -0.94
ARRDC3-201ENST00000265138 SETD5Q9C0A6 1442 aa9.21□□□□□ -0.94
ARRDC3-201ENST00000265138 RRBP1Q9P2E9 1410 aaKnown RBP9.21□□□□□ -0.94
ARRDC3-201ENST00000265138 CANXP27824 592 aaKnown RBP9.2□□□□□ -0.94
ARRDC3-201ENST00000265138 MTERF4Q7Z6M4 381 aaKnown RBP9.2□□□□□ -0.94
ARRDC3-201ENST00000265138 DCAF11Q8TEB1 546 aa9.2□□□□□ -0.94
ARRDC3-201ENST00000265138 FRAT2O75474 233 aaPredicted RBP9.2□□□□□ -0.94
ARRDC3-201ENST00000265138 BCL11BQ9C0K0 894 aaPredicted RBP9.19□□□□□ -0.94
ARRDC3-201ENST00000265138 BAZ1BQ9UIG0 1483 aaKnown RBP9.18□□□□□ -0.94
ARRDC3-201ENST00000265138 ANP32BQ92688 251 aaKnown RBP9.17□□□□□ -0.94
ARRDC3-201ENST00000265138 SMARCA2P51531 1590 aa9.17□□□□□ -0.94
ARRDC3-201ENST00000265138 MYH16Q9H6N6 1097 aa9.17□□□□□ -0.94
ARRDC3-201ENST00000265138 NCAPD3P42695 1498 aa9.16□□□□□ -0.94
ARRDC3-201ENST00000265138 BBXQ8WY36 941 aaPredicted RBP9.16□□□□□ -0.94
ARRDC3-201ENST00000265138 RNF123Q5XPI4 1314 aa9.16□□□□□ -0.94
ARRDC3-201ENST00000265138 RGS3P49796 1198 aa9.16□□□□□ -0.94
ARRDC3-201ENST00000265138 EIF4G2P78344 907 aaKnown RBP eCLIP9.15□□□□□ -0.94
ARRDC3-201ENST00000265138 SMAP1Q8IYB5 467 aaPredicted RBP9.15□□□□□ -0.95
ARRDC3-201ENST00000265138 PRKRIP1Q9H875 184 aaPredicted RBP9.15□□□□□ -0.95
ARRDC3-201ENST00000265138 ESPNB1AK53 854 aa9.14□□□□□ -0.95
ARRDC3-201ENST00000265138 SLC4A3P48751 1232 aa9.14□□□□□ -0.95
ARRDC3-201ENST00000265138 MRE11P49959 708 aa9.14□□□□□ -0.95
ARRDC3-201ENST00000265138 ISY1Q9ULR0 285 aaKnown RBP9.14□□□□□ -0.95
ARRDC3-201ENST00000265138 AKNAQ7Z591 1439 aa9.14□□□□□ -0.95
ARRDC3-201ENST00000265138 ARXQ96QS3 562 aa9.14□□□□□ -0.95
ARRDC3-201ENST00000265138 ARID4BQ4LE39 1312 aaPredicted RBP9.13□□□□□ -0.95
ARRDC3-201ENST00000265138 MAPKBP1O60336 1514 aa9.13□□□□□ -0.95
ARRDC3-201ENST00000265138 KIF21BO75037 1637 aa9.12□□□□□ -0.95
ARRDC3-201ENST00000265138 FAM161AQ3B820 660 aa9.12□□□□□ -0.95
ARRDC3-201ENST00000265138 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.12□□□□□ -0.95
ARRDC3-201ENST00000265138 NAP1L2Q9ULW6 460 aaPredicted RBP9.12□□□□□ -0.95
ARRDC3-201ENST00000265138 FHAD1B1AJZ9 1412 aa9.12□□□□□ -0.95
ARRDC3-201ENST00000265138 CDK11BP21127 795 aaKnown RBP9.12□□□□□ -0.95
ARRDC3-201ENST00000265138 RRP1P56182 461 aaKnown RBP9.12□□□□□ -0.95
ARRDC3-201ENST00000265138 CNTLNQ9NXG0 1405 aa9.12□□□□□ -0.95
ARRDC3-201ENST00000265138 PRDM4Q9UKN5 801 aa9.11□□□□□ -0.95
ARRDC3-201ENST00000265138 FAM50AQ14320 339 aaKnown RBP9.11□□□□□ -0.95
ARRDC3-201ENST00000265138 POGKQ9P215 609 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms