RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 CANXP27824 592 aaKnown RBP15.52■□□□□ 0.07
DNMT3A-201ENST00000264709 NPM2Q86SE8 214 aaKnown RBP15.51■□□□□ 0.07
DNMT3A-201ENST00000264709 FANCIQ9NVI1 1328 aa15.51■□□□□ 0.07
DNMT3A-201ENST00000264709 TMC1Q8TDI8 760 aa15.48■□□□□ 0.07
DNMT3A-201ENST00000264709 DEKP35659 375 aaKnown RBP15.46■□□□□ 0.07
DNMT3A-201ENST00000264709 MTUS2Q5JR59 1369 aa15.46■□□□□ 0.06
DNMT3A-201ENST00000264709 FAM9BQ8IZU0 186 aa15.45■□□□□ 0.06
DNMT3A-201ENST00000264709 SLC4A1APQ9BWU0 796 aaKnown RBP15.45■□□□□ 0.06
DNMT3A-201ENST00000264709 ARID4BQ4LE39 1312 aaPredicted RBP15.44■□□□□ 0.06
DNMT3A-201ENST00000264709 SETD5Q9C0A6 1442 aa15.43■□□□□ 0.06
DNMT3A-201ENST00000264709 HSP90AA1P07900 732 aaKnown RBP15.4■□□□□ 0.06
DNMT3A-201ENST00000264709 KIF21BO75037 1637 aa15.4■□□□□ 0.06
DNMT3A-201ENST00000264709 WIZO95785 1651 aa15.4■□□□□ 0.06
DNMT3A-201ENST00000264709 ZNF326Q5BKZ1 582 aaKnown RBP15.38■□□□□ 0.05
DNMT3A-201ENST00000264709 MROH2BQ7Z745 1585 aa15.36■□□□□ 0.05
DNMT3A-201ENST00000264709 ABCC8Q09428 1581 aa15.36■□□□□ 0.05
DNMT3A-201ENST00000264709 L1TD1Q5T7N2 865 aaKnown RBP15.35■□□□□ 0.05
DNMT3A-201ENST00000264709 TNNT2P45379 298 aaPredicted RBP15.35■□□□□ 0.05
DNMT3A-201ENST00000264709 ARHGAP35Q9NRY4 1499 aa15.35■□□□□ 0.05
DNMT3A-201ENST00000264709 CNGB1Q14028 1251 aaPredicted RBP15.35■□□□□ 0.05
DNMT3A-201ENST00000264709 SMARCA2P51531 1590 aa15.34■□□□□ 0.05
DNMT3A-201ENST00000264709 CCDC88BA6NC98 1476 aa15.34■□□□□ 0.05
DNMT3A-201ENST00000264709 TRIM44Q96DX7 344 aaPredicted RBP15.34■□□□□ 0.05
DNMT3A-201ENST00000264709 GOLGA6L22H0YM25 854 aa15.32■□□□□ 0.04
DNMT3A-201ENST00000264709 SOGA1O94964 1423 aa15.32■□□□□ 0.04
DNMT3A-201ENST00000264709 IPO9Q96P70 1041 aaKnown RBP15.3■□□□□ 0.04
DNMT3A-201ENST00000264709 TCERG1O14776 1098 aaKnown RBP15.3■□□□□ 0.04
DNMT3A-201ENST00000264709 SMARCA4P51532 1647 aa15.3■□□□□ 0.04
DNMT3A-201ENST00000264709 NCLP19338 710 aaKnown RBP15.29■□□□□ 0.04
DNMT3A-201ENST00000264709 RSPH6AQ9H0K4 717 aa15.29■□□□□ 0.04
DNMT3A-201ENST00000264709 CECR2Q9BXF3 1484 aa15.28■□□□□ 0.04
DNMT3A-201ENST00000264709 DHX57Q6P158 1386 aaKnown RBP15.26■□□□□ 0.03
DNMT3A-201ENST00000264709 ROCK2O75116 1388 aaKnown RBP15.26■□□□□ 0.03
DNMT3A-201ENST00000264709 RAB3GAP2Q9H2M9 1393 aa15.25■□□□□ 0.03
DNMT3A-201ENST00000264709 IRX6P78412 446 aaPredicted RBP15.24■□□□□ 0.03
DNMT3A-201ENST00000264709 SLC24A1O60721 1099 aa15.24■□□□□ 0.03
DNMT3A-201ENST00000264709 WDR43Q15061 677 aaKnown RBP eCLIP15.23■□□□□ 0.03
DNMT3A-201ENST00000264709 ERICH3Q5RHP9 1530 aa15.23■□□□□ 0.03
DNMT3A-201ENST00000264709 PTMSP20962 102 aa15.23■□□□□ 0.03
DNMT3A-201ENST00000264709 ZBED9Q6R2W3 1325 aa15.23■□□□□ 0.03
DNMT3A-201ENST00000264709 FMN1Q68DA7 1419 aa15.21■□□□□ 0.03
DNMT3A-201ENST00000264709 CDCA8Q53HL2 280 aa15.21■□□□□ 0.03
DNMT3A-201ENST00000264709 PHLDB1Q86UU1 1377 aa15.21■□□□□ 0.03
DNMT3A-201ENST00000264709 PDE3BQ13370 1112 aa15.16■□□□□ 0.02
DNMT3A-201ENST00000264709 B4GALNT3Q6L9W6 998 aa15.15■□□□□ 0.02
DNMT3A-201ENST00000264709 CHMP4BQ9H444 224 aaKnown RBP15.14■□□□□ 0.01
DNMT3A-201ENST00000264709 PABPN1Q86U42 306 aaKnown RBP eCLIP15.14■□□□□ 0.01
DNMT3A-201ENST00000264709 MS4A1P11836 297 aa15.13■□□□□ 0.01
DNMT3A-201ENST00000264709 NAP1L5Q96NT1 182 aaPredicted RBP15.13■□□□□ 0.01
DNMT3A-201ENST00000264709 PPP1R15AO75807 674 aaPredicted RBP15.11■□□□□ 0.01
DNMT3A-201ENST00000264709 CFAP44Q96MT7 982 aa15.11■□□□□ 0.01
DNMT3A-201ENST00000264709 LAS1LQ9Y4W2 734 aaKnown RBP15.11■□□□□ 0.01
DNMT3A-201ENST00000264709 RALBP1Q15311 655 aa15.11■□□□□ 0.01
DNMT3A-201ENST00000264709 CUX1P39880 1505 aa15.11■□□□□ 0.01
DNMT3A-201ENST00000264709 PNNQ9H307 717 aaKnown RBP15.1■□□□□ 0.01
DNMT3A-201ENST00000264709 MYH16Q9H6N6 1097 aa15.1■□□□□ 0.01
DNMT3A-201ENST00000264709 NUDCQ9Y266 331 aa15.09■□□□□ 0.01
DNMT3A-201ENST00000264709 P3H3Q8IVL6 736 aa15.08■□□□□ 0.01
DNMT3A-201ENST00000264709 RAPGEF2Q9Y4G8 1499 aa15.08■□□□□ 0.01
DNMT3A-201ENST00000264709 KTN1Q86UP2 1357 aaKnown RBP15.07■□□□□ 0
DNMT3A-201ENST00000264709 RRBP1Q9P2E9 1410 aaKnown RBP15.06■□□□□ 0
DNMT3A-201ENST00000264709 CCDC18Q5T9S5 1454 aa15.04■□□□□ -0
DNMT3A-201ENST00000264709 HIRIP3Q9BW71 556 aaPredicted RBP15.04■□□□□ -0
DNMT3A-201ENST00000264709 TSPY4P0CV99 314 aa15.03■□□□□ -0
DNMT3A-201ENST00000264709 TSPY10P0CW01 314 aa15.03■□□□□ -0
DNMT3A-201ENST00000264709 KNSTRNQ9Y448 316 aa15.03■□□□□ -0
DNMT3A-201ENST00000264709 GSE1Q14687 1217 aa15.03■□□□□ -0
DNMT3A-201ENST00000264709 SIN3AQ96ST3 1273 aa15.02■□□□□ -0
DNMT3A-201ENST00000264709 RTN4Q9NQC3 1192 aaKnown RBP15.01□□□□□ -0.01
DNMT3A-201ENST00000264709 RCAN3Q9UKA8 241 aa15.01□□□□□ -0.01
DNMT3A-201ENST00000264709 CARMIL1Q5VZK9 1371 aa15.01□□□□□ -0.01
DNMT3A-201ENST00000264709 MSNP26038 577 aaKnown RBP14.99□□□□□ -0.01
DNMT3A-201ENST00000264709 CASC1Q6TDU7 716 aa14.99□□□□□ -0.01
DNMT3A-201ENST00000264709 GBP4Q96PP9 640 aa14.98□□□□□ -0.01
DNMT3A-201ENST00000264709 CHAF1AQ13111 956 aaPredicted RBP14.98□□□□□ -0.01
DNMT3A-201ENST00000264709 CUX2O14529 1486 aa14.97□□□□□ -0.01
DNMT3A-201ENST00000264709 HSCBQ8IWL3 235 aa14.97□□□□□ -0.01
DNMT3A-201ENST00000264709 CARD11Q9BXL7 1154 aa14.97□□□□□ -0.01
DNMT3A-201ENST00000264709 KIF15Q9NS87 1388 aa14.97□□□□□ -0.01
DNMT3A-201ENST00000264709 CHIC2Q9UKJ5 165 aa14.97□□□□□ -0.01
DNMT3A-201ENST00000264709 UACAQ9BZF9 1416 aa14.96□□□□□ -0.01
DNMT3A-201ENST00000264709 MAPK8IP3Q9UPT6 1336 aa14.96□□□□□ -0.01
DNMT3A-201ENST00000264709 RRP7BPQ9NSQ0 103 aa14.96□□□□□ -0.02
DNMT3A-201ENST00000264709 NGEFQ8N5V2 710 aa14.95□□□□□ -0.02
DNMT3A-201ENST00000264709 NLRP13Q86W25 1043 aa14.95□□□□□ -0.02
DNMT3A-201ENST00000264709 HSP90AA2PQ14568 343 aaPredicted RBP14.95□□□□□ -0.02
DNMT3A-201ENST00000264709 HSPA5P11021 654 aaKnown RBP14.94□□□□□ -0.02
DNMT3A-201ENST00000264709 CFAP53Q96M91 514 aa14.94□□□□□ -0.02
DNMT3A-201ENST00000264709 AAMPQ13685 434 aa14.93□□□□□ -0.02
DNMT3A-201ENST00000264709 FTSJ3Q8IY81 847 aaKnown RBP14.93□□□□□ -0.02
DNMT3A-201ENST00000264709 GOLGA6L3A6NEY3 463 aa14.93□□□□□ -0.02
DNMT3A-201ENST00000264709 CNTLNQ9NXG0 1405 aa14.93□□□□□ -0.02
DNMT3A-201ENST00000264709 MAP3K1Q13233 1512 aa14.92□□□□□ -0.02
DNMT3A-201ENST00000264709 PTMAP06454 111 aaKnown RBP14.92□□□□□ -0.02
DNMT3A-201ENST00000264709 DDX11L8A8MPP1 907 aa14.92□□□□□ -0.02
DNMT3A-201ENST00000264709 KANK4Q5T7N3 995 aaPredicted RBP14.92□□□□□ -0.02
DNMT3A-201ENST00000264709 EIF3AQ14152 1382 aaKnown RBP14.91□□□□□ -0.02
DNMT3A-201ENST00000264709 ZNF777Q9ULD5 760 aaPredicted RBP14.91□□□□□ -0.02
DNMT3A-201ENST00000264709 ARXQ96QS3 562 aa14.91□□□□□ -0.02
DNMT3A-201ENST00000264709 CENPQQ7L2Z9 268 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms