RNA–Protein interactions for RNA: ENST00000263578.9

FOXRED1-201, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FOXRED1, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-201ENST00000263578 EIF4G3O43432 1585 aaKnown RBP24.4■■□□□ 1.5
FOXRED1-201ENST00000263578 FHAD1B1AJZ9 1412 aa24.38■■□□□ 1.49
FOXRED1-201ENST00000263578 EFCAB5A4FU69 1503 aa24.34■■□□□ 1.49
FOXRED1-201ENST00000263578 APLP2Q06481 763 aa24.3■■□□□ 1.48
FOXRED1-201ENST00000263578 TTBK1Q5TCY1 1321 aaPredicted RBP24.28■■□□□ 1.48
FOXRED1-201ENST00000263578 SNAPC4Q5SXM2 1469 aa24.26■■□□□ 1.47
FOXRED1-201ENST00000263578 SAMD9Q5K651 1589 aa24.22■■□□□ 1.47
FOXRED1-201ENST00000263578 MAGI1Q96QZ7 1491 aaPredicted RBP24.21■■□□□ 1.47
FOXRED1-201ENST00000263578 FHOD3Q2V2M9 1422 aa24.18■■□□□ 1.46
FOXRED1-201ENST00000263578 IQGAP2Q13576 1575 aa24.18■■□□□ 1.46
FOXRED1-201ENST00000263578 HRCP23327 699 aa24.16■■□□□ 1.46
FOXRED1-201ENST00000263578 PCF11O94913 1555 aaKnown RBP24.15■■□□□ 1.46
FOXRED1-201ENST00000263578 GRIN2AQ12879 1464 aa24.15■■□□□ 1.46
FOXRED1-201ENST00000263578 P3H3Q8IVL6 736 aa24.13■■□□□ 1.45
FOXRED1-201ENST00000263578 MAP3K1Q13233 1512 aa24.12■■□□□ 1.45
FOXRED1-201ENST00000263578 SYNJ2O15056 1496 aa24.11■■□□□ 1.45
FOXRED1-201ENST00000263578 TIAM1Q13009 1591 aa24.1■■□□□ 1.45
FOXRED1-201ENST00000263578 FYCO1Q9BQS8 1478 aa24.1■■□□□ 1.45
FOXRED1-201ENST00000263578 FMN1Q68DA7 1419 aa24.09■■□□□ 1.45
FOXRED1-201ENST00000263578 CFAP43Q8NDM7 1665 aa24.08■■□□□ 1.45
FOXRED1-201ENST00000263578 CASKIN1Q8WXD9 1431 aa24.06■■□□□ 1.44
FOXRED1-201ENST00000263578 KIAA0586Q9BVV6 1533 aa24.05■■□□□ 1.44
FOXRED1-201ENST00000263578 KANK4Q5T7N3 995 aaPredicted RBP24.04■■□□□ 1.44
FOXRED1-201ENST00000263578 UGGT2Q9NYU1 1516 aa24.04■■□□□ 1.44
FOXRED1-201ENST00000263578 CEP170Q5SW79 1584 aa24■■□□□ 1.43
FOXRED1-201ENST00000263578 CHMP7Q8WUX9 453 aaPredicted RBP24■■□□□ 1.43
FOXRED1-201ENST00000263578 LRRC9Q6ZRR7 1453 aa23.96■■□□□ 1.43
FOXRED1-201ENST00000263578 NUP160Q12769 1436 aa23.95■■□□□ 1.42
FOXRED1-201ENST00000263578 KIAA0556O60303 1618 aa23.93■■□□□ 1.42
FOXRED1-201ENST00000263578 FBLN2P98095 1184 aa23.91■■□□□ 1.42
FOXRED1-201ENST00000263578 LRRIQ1Q96JM4 1722 aa23.91■■□□□ 1.42
FOXRED1-201ENST00000263578 ATP1B4Q9UN42 357 aaPredicted RBP23.91■■□□□ 1.42
FOXRED1-201ENST00000263578 DISP1Q96F81 1524 aa23.89■■□□□ 1.42
FOXRED1-201ENST00000263578 RRBP1Q9P2E9 1410 aaKnown RBP23.87■■□□□ 1.41
FOXRED1-201ENST00000263578 HECW1Q76N89 1606 aa23.86■■□□□ 1.41
FOXRED1-201ENST00000263578 CHD1O14646 1710 aa23.85■■□□□ 1.41
FOXRED1-201ENST00000263578 CCDC18Q5T9S5 1454 aa23.81■■□□□ 1.4
FOXRED1-201ENST00000263578 ZEB1P37275 1124 aaPredicted RBP23.78■■□□□ 1.4
FOXRED1-201ENST00000263578 CCNB3Q8WWL7 1395 aa23.78■■□□□ 1.4
FOXRED1-201ENST00000263578 HNRNPUL2Q1KMD3 747 aaKnown RBP23.77■■□□□ 1.4
FOXRED1-201ENST00000263578 CARMIL2Q6F5E8 1435 aa23.75■■□□□ 1.39
FOXRED1-201ENST00000263578 EHBP1L1Q8N3D4 1523 aa23.74■■□□□ 1.39
FOXRED1-201ENST00000263578 PHLDB1Q86UU1 1377 aa23.74■■□□□ 1.39
FOXRED1-201ENST00000263578 MTUS2Q5JR59 1369 aa23.74■■□□□ 1.39
FOXRED1-201ENST00000263578 EPRSP07814 1512 aaKnown RBP23.73■■□□□ 1.39
FOXRED1-201ENST00000263578 RAPGEF6Q8TEU7 1601 aa23.73■■□□□ 1.39
FOXRED1-201ENST00000263578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.72■■□□□ 1.39
FOXRED1-201ENST00000263578 JPH4Q96JJ6 628 aa23.72■■□□□ 1.39
FOXRED1-201ENST00000263578 SUPT6HQ7KZ85 1726 aaKnown RBP23.7■■□□□ 1.38
FOXRED1-201ENST00000263578 CCER1Q8TC90 406 aaPredicted RBP23.68■■□□□ 1.38
FOXRED1-201ENST00000263578 CDK13Q14004 1512 aaKnown RBP23.67■■□□□ 1.38
FOXRED1-201ENST00000263578 MAGI3Q5TCQ9 1506 aa23.66■■□□□ 1.38
FOXRED1-201ENST00000263578 NUP153P49790 1475 aaKnown RBP23.64■■□□□ 1.38
FOXRED1-201ENST00000263578 NCOA2Q15596 1464 aa23.63■■□□□ 1.37
FOXRED1-201ENST00000263578 SHROOM2Q13796 1616 aa23.62■■□□□ 1.37
FOXRED1-201ENST00000263578 ARHGEF11O15085 1522 aa23.6■■□□□ 1.37
FOXRED1-201ENST00000263578 PRG4Q92954 1404 aaPredicted RBP23.59■■□□□ 1.37
FOXRED1-201ENST00000263578 PLB1Q6P1J6 1458 aa23.59■■□□□ 1.37
FOXRED1-201ENST00000263578 FGD6Q6ZV73 1430 aa23.58■■□□□ 1.37
FOXRED1-201ENST00000263578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.56■■□□□ 1.36
FOXRED1-201ENST00000263578 ABCA8O94911 1581 aa23.55■■□□□ 1.36
FOXRED1-201ENST00000263578 MYOM3Q5VTT5 1437 aa23.55■■□□□ 1.36
FOXRED1-201ENST00000263578 CLASP1Q7Z460 1538 aa23.54■■□□□ 1.36
FOXRED1-201ENST00000263578 ARID3CA6NKF2 412 aa23.52■■□□□ 1.36
FOXRED1-201ENST00000263578 FAM50AQ14320 339 aaKnown RBP23.52■■□□□ 1.36
FOXRED1-201ENST00000263578 ITGAEP38570 1179 aa23.49■■□□□ 1.35
FOXRED1-201ENST00000263578 PTPRGP23470 1445 aa23.46■■□□□ 1.35
FOXRED1-201ENST00000263578 PTPN23Q9H3S7 1636 aa23.46■■□□□ 1.35
FOXRED1-201ENST00000263578 CDK11AQ9UQ88 783 aaPredicted RBP23.46■■□□□ 1.35
FOXRED1-201ENST00000263578 TROQ12816 1431 aaPredicted RBP23.42■■□□□ 1.34
FOXRED1-201ENST00000263578 ERCC6L2Q5T890 1561 aa23.42■■□□□ 1.34
FOXRED1-201ENST00000263578 ADCY10Q96PN6 1610 aa23.42■■□□□ 1.34
FOXRED1-201ENST00000263578 TCOF1Q13428 1488 aaKnown RBP23.41■■□□□ 1.34
FOXRED1-201ENST00000263578 MIA2Q96PC5 1412 aa23.39■■□□□ 1.34
FOXRED1-201ENST00000263578 ATP10BO94823 1461 aa23.37■■□□□ 1.33
FOXRED1-201ENST00000263578 SETD5Q9C0A6 1442 aa23.36■■□□□ 1.33
FOXRED1-201ENST00000263578 DHX57Q6P158 1386 aaKnown RBP23.35■■□□□ 1.33
FOXRED1-201ENST00000263578 RAB3GAP2Q9H2M9 1393 aa23.35■■□□□ 1.33
FOXRED1-201ENST00000263578 UACAQ9BZF9 1416 aa23.35■■□□□ 1.33
FOXRED1-201ENST00000263578 KIF14Q15058 1648 aa23.34■■□□□ 1.33
FOXRED1-201ENST00000263578 ITSN2Q9NZM3 1697 aa23.34■■□□□ 1.33
FOXRED1-201ENST00000263578 ABCC2Q92887 1545 aa23.3■■□□□ 1.32
FOXRED1-201ENST00000263578 PTPRKQ15262 1439 aa23.29■■□□□ 1.32
FOXRED1-201ENST00000263578 CLSPNQ9HAW4 1339 aa23.29■■□□□ 1.32
FOXRED1-201ENST00000263578 PLEKHD1A6NEE1 506 aa23.27■■□□□ 1.32
FOXRED1-201ENST00000263578 HFM1A2PYH4 1435 aa23.25■■□□□ 1.31
FOXRED1-201ENST00000263578 GPATCH8Q9UKJ3 1502 aaKnown RBP23.22■■□□□ 1.31
FOXRED1-201ENST00000263578 ABCC10Q5T3U5 1492 aa23.21■■□□□ 1.31
FOXRED1-201ENST00000263578 CDC42BPAQ5VT25 1732 aa23.21■■□□□ 1.31
FOXRED1-201ENST00000263578 DNMT1P26358 1616 aaKnown RBP23.21■■□□□ 1.31
FOXRED1-201ENST00000263578 UHRF1BP1LA0JNW5 1464 aa23.21■■□□□ 1.31
FOXRED1-201ENST00000263578 GCC2Q8IWJ2 1684 aa23.19■■□□□ 1.3
FOXRED1-201ENST00000263578 AKNAQ7Z591 1439 aa23.18■■□□□ 1.3
FOXRED1-201ENST00000263578 CAMSAP2Q08AD1 1489 aa23.18■■□□□ 1.3
FOXRED1-201ENST00000263578 NAIPQ13075 1403 aa23.17■■□□□ 1.3
FOXRED1-201ENST00000263578 ZCCHC11Q5TAX3 1644 aaKnown RBP23.16■■□□□ 1.3
FOXRED1-201ENST00000263578 DAPK1P53355 1430 aa23.16■■□□□ 1.3
FOXRED1-201ENST00000263578 CFDP1Q9UEE9 299 aaPredicted RBP23.15■■□□□ 1.3
FOXRED1-201ENST00000263578 MAPKBP1O60336 1514 aa23.14■■□□□ 1.29
FOXRED1-201ENST00000263578 OSCARQ8IYS5 282 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms