RNA–Protein interactions for RNA: ENST00000262039.8

PIK3C3-201, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PIK3C3, Length 9,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-201ENST00000262039 FAM50AQ14320 339 aaKnown RBP6.81□□□□□ -1.32
PIK3C3-201ENST00000262039 NBR1Q14596 966 aa6.8□□□□□ -1.32
PIK3C3-201ENST00000262039 DCAF8L1A6NGE4 600 aa6.8□□□□□ -1.32
PIK3C3-201ENST00000262039 ANP32CO43423 234 aa6.8□□□□□ -1.32
PIK3C3-201ENST00000262039 NAP1L2Q9ULW6 460 aaPredicted RBP6.8□□□□□ -1.32
PIK3C3-201ENST00000262039 TMX4Q9H1E5 349 aaPredicted RBP6.8□□□□□ -1.32
PIK3C3-201ENST00000262039 CHAF1AQ13111 956 aaPredicted RBP6.79□□□□□ -1.32
PIK3C3-201ENST00000262039 ACIN1Q9UKV3 1341 aaKnown RBP6.79□□□□□ -1.32
PIK3C3-201ENST00000262039 NEUROD1Q13562 356 aa6.78□□□□□ -1.32
PIK3C3-201ENST00000262039 VSIG10Q8N0Z9 540 aa6.78□□□□□ -1.32
PIK3C3-201ENST00000262039 FBLN2P98095 1184 aa6.77□□□□□ -1.33
PIK3C3-201ENST00000262039 WWC1Q8IX03 1113 aa6.77□□□□□ -1.33
PIK3C3-201ENST00000262039 PLCB2Q00722 1185 aa6.76□□□□□ -1.33
PIK3C3-201ENST00000262039 NRDCO43847 1150 aa6.75□□□□□ -1.33
PIK3C3-201ENST00000262039 CEP89Q96ST8 783 aa6.75□□□□□ -1.33
PIK3C3-201ENST00000262039 GOLGA6L22H0YM25 854 aa6.74□□□□□ -1.33
PIK3C3-201ENST00000262039 ERICH6BQ5W0A0 696 aa6.74□□□□□ -1.33
PIK3C3-201ENST00000262039 FGD1P98174 961 aa6.74□□□□□ -1.33
PIK3C3-201ENST00000262039 CASC1Q6TDU7 716 aa6.74□□□□□ -1.33
PIK3C3-201ENST00000262039 PATL2C9JE40 543 aaKnown RBP6.73□□□□□ -1.33
PIK3C3-201ENST00000262039 G3V3G9 751 aa6.73□□□□□ -1.33
PIK3C3-201ENST00000262039 DCAF8Q5TAQ9 597 aa6.73□□□□□ -1.33
PIK3C3-201ENST00000262039 SEPT11Q9NVA2 429 aaKnown RBP6.73□□□□□ -1.33
PIK3C3-201ENST00000262039 WDR70Q9NW82 654 aa6.72□□□□□ -1.33
PIK3C3-201ENST00000262039 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.72□□□□□ -1.33
PIK3C3-201ENST00000262039 NEUROD2Q15784 382 aa6.71□□□□□ -1.33
PIK3C3-201ENST00000262039 GOLGA6L4A6NEF3 574 aa6.71□□□□□ -1.34
PIK3C3-201ENST00000262039 PPM1FP49593 454 aaPredicted RBP6.71□□□□□ -1.34
PIK3C3-201ENST00000262039 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.71□□□□□ -1.343e-6■■■■■ 28.8
PIK3C3-201ENST00000262039 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.71□□□□□ -1.34
PIK3C3-201ENST00000262039 GNL2Q13823 731 aaKnown RBP6.71□□□□□ -1.34
PIK3C3-201ENST00000262039 CWC22Q9HCG8 908 aaKnown RBP6.71□□□□□ -1.34
PIK3C3-201ENST00000262039 DRC7Q8IY82 874 aa6.7□□□□□ -1.34
PIK3C3-201ENST00000262039 TNNT3P45378 269 aaPredicted RBP6.7□□□□□ -1.34
PIK3C3-201ENST00000262039 VPS53Q5VIR6 699 aa6.69□□□□□ -1.34
PIK3C3-201ENST00000262039 SETQ01105 290 aaPredicted RBP6.69□□□□□ -1.34
PIK3C3-201ENST00000262039 GOLGA6L1Q8N7Z2 621 aa6.68□□□□□ -1.34
PIK3C3-201ENST00000262039 EIF4G2P78344 907 aaKnown RBP eCLIP6.67□□□□□ -1.34
PIK3C3-201ENST00000262039 TAF7LQ5H9L4 462 aa6.67□□□□□ -1.34
PIK3C3-201ENST00000262039 MAP3K9P80192 1104 aa6.67□□□□□ -1.34
PIK3C3-201ENST00000262039 LMOD2Q6P5Q4 547 aa6.67□□□□□ -1.34
PIK3C3-201ENST00000262039 KCNJ4P48050 445 aa6.66□□□□□ -1.34
PIK3C3-201ENST00000262039 OS9Q13438 667 aaPredicted RBP6.66□□□□□ -1.34
PIK3C3-201ENST00000262039 SALL2Q9Y467 1007 aaPredicted RBP6.66□□□□□ -1.34
PIK3C3-201ENST00000262039 TCEAL9Q9UHQ7 104 aa6.65□□□□□ -1.34
PIK3C3-201ENST00000262039 NAP1L5Q96NT1 182 aaPredicted RBP6.65□□□□□ -1.34
PIK3C3-201ENST00000262039 CCDC97Q96F63 343 aaPredicted RBP6.64□□□□□ -1.35
PIK3C3-201ENST00000262039 PAF1Q8N7H5 531 aa6.64□□□□□ -1.35
PIK3C3-201ENST00000262039 PHF23Q9BUL5 403 aaPredicted RBP6.64□□□□□ -1.35
PIK3C3-201ENST00000262039 NPM1P06748 294 aaKnown RBP eCLIP6.64□□□□□ -1.35
PIK3C3-201ENST00000262039 BECN1Q14457 450 aa6.63□□□□□ -1.35
PIK3C3-201ENST00000262039 USP35Q9P2H5 1018 aa6.63□□□□□ -1.35
PIK3C3-201ENST00000262039 CREBRFQ8IUR6 639 aa6.62□□□□□ -1.35
PIK3C3-201ENST00000262039 TPM4P67936 248 aa6.62□□□□□ -1.35
PIK3C3-201ENST00000262039 WDR43Q15061 677 aaKnown RBP eCLIP6.62□□□□□ -1.35
PIK3C3-201ENST00000262039 CTDP1Q9Y5B0 961 aaPredicted RBP6.61□□□□□ -1.35
PIK3C3-201ENST00000262039 ARID4BQ4LE39 1312 aaPredicted RBP6.61□□□□□ -1.35
PIK3C3-201ENST00000262039 PPP1R15AO75807 674 aaPredicted RBP6.6□□□□□ -1.35
PIK3C3-201ENST00000262039 BCCIPQ9P287 314 aaKnown RBP eCLIP6.6□□□□□ -1.35
PIK3C3-201ENST00000262039 ZNF777Q9ULD5 760 aaPredicted RBP6.59□□□□□ -1.35
PIK3C3-201ENST00000262039 MEX3CQ5U5Q3 659 aaKnown RBP6.59□□□□□ -1.35
PIK3C3-201ENST00000262039 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.59□□□□□ -1.359e-7■■□□□ 12.6
PIK3C3-201ENST00000262039 MARCH6O60337 910 aa6.59□□□□□ -1.35
PIK3C3-201ENST00000262039 CCDC136Q96JN2 1154 aa6.59□□□□□ -1.36
PIK3C3-201ENST00000262039 BBXQ8WY36 941 aaPredicted RBP6.59□□□□□ -1.36
PIK3C3-201ENST00000262039 CCDC9Q9Y3X0 531 aaKnown RBP6.58□□□□□ -1.36
PIK3C3-201ENST00000262039 RASSF8Q8NHQ8 419 aa6.58□□□□□ -1.36
PIK3C3-201ENST00000262039 HTATSF1O43719 755 aaKnown RBP6.57□□□□□ -1.36
PIK3C3-201ENST00000262039 STK11IPQ8N1F8 1099 aa6.57□□□□□ -1.36
PIK3C3-201ENST00000262039 KLHL34Q8N239 644 aa6.57□□□□□ -1.36
PIK3C3-201ENST00000262039 AEBP2Q6ZN18 517 aaPredicted RBP6.57□□□□□ -1.36
PIK3C3-201ENST00000262039 IPO9Q96P70 1041 aaKnown RBP6.57□□□□□ -1.36
PIK3C3-201ENST00000262039 LAS1LQ9Y4W2 734 aaKnown RBP6.56□□□□□ -1.36
PIK3C3-201ENST00000262039 CBX1P83916 185 aa6.56□□□□□ -1.36
PIK3C3-201ENST00000262039 ARID3CA6NKF2 412 aa6.55□□□□□ -1.36
PIK3C3-201ENST00000262039 TRIM34Q9BYJ4 488 aa6.55□□□□□ -1.36
PIK3C3-201ENST00000262039 WWC2Q6AWC2 1192 aa6.55□□□□□ -1.36
PIK3C3-201ENST00000262039 PPM1GO15355 546 aaPredicted RBP6.55□□□□□ -1.36
PIK3C3-201ENST00000262039 PDCL3Q9H2J4 239 aa6.55□□□□□ -1.36
PIK3C3-201ENST00000262039 PTMSP20962 102 aa6.54□□□□□ -1.36
PIK3C3-201ENST00000262039 ODF2Q5BJF6 829 aa6.54□□□□□ -1.36
PIK3C3-201ENST00000262039 RBM19Q9Y4C8 960 aaKnown RBP6.54□□□□□ -1.36
PIK3C3-201ENST00000262039 HSP90AB1P08238 724 aaKnown RBP6.54□□□□□ -1.36
PIK3C3-201ENST00000262039 PES1O00541 588 aaKnown RBP6.54□□□□□ -1.36
PIK3C3-201ENST00000262039 MSNP26038 577 aaKnown RBP6.54□□□□□ -1.36
PIK3C3-201ENST00000262039 HSP90B1P14625 803 aaKnown RBP6.53□□□□□ -1.36
PIK3C3-201ENST00000262039 ARID3AQ99856 593 aa6.53□□□□□ -1.36
PIK3C3-201ENST00000262039 MSH5O43196 834 aa6.53□□□□□ -1.36
PIK3C3-201ENST00000262039 SPDYE4A6NLX3 237 aa6.53□□□□□ -1.36
PIK3C3-201ENST00000262039 DDRGK1Q96HY6 314 aa6.53□□□□□ -1.36
PIK3C3-201ENST00000262039 RAD21O60216 631 aa6.52□□□□□ -1.37
PIK3C3-201ENST00000262039 FTSJ3Q8IY81 847 aaKnown RBP6.52□□□□□ -1.37
PIK3C3-201ENST00000262039 GSE1Q14687 1217 aa6.52□□□□□ -1.37
PIK3C3-201ENST00000262039 ZNF330Q9Y3S2 320 aaPredicted RBP6.52□□□□□ -1.37
PIK3C3-201ENST00000262039 GTF3C3Q9Y5Q9 886 aa6.51□□□□□ -1.37
PIK3C3-201ENST00000262039 TPM3P06753 285 aa6.51□□□□□ -1.37
PIK3C3-201ENST00000262039 R3HCC1Q9Y3T6 440 aaKnown RBP6.51□□□□□ -1.37
PIK3C3-201ENST00000262039 HMMRO75330 724 aa6.5□□□□□ -1.37
PIK3C3-201ENST00000262039 CCAR1Q8IX12 1150 aaKnown RBP6.5□□□□□ -1.37
PIK3C3-201ENST00000262039 HOMER1Q86YM7 354 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms