RNA–Protein interactions for RNA: ENST00000256367.2

TTC9-201, Transcript of tetratricopeptide repeat domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC9, Length 5,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9-201ENST00000256367 CFDP1Q9UEE9 299 aaPredicted RBP29.71■■■□□ 2.35
TTC9-201ENST00000256367 SALL2Q9Y467 1007 aaPredicted RBP29.71■■■□□ 2.35
TTC9-201ENST00000256367 ERCC6Q03468 1493 aa29.71■■■□□ 2.35
TTC9-201ENST00000256367 EIF4G2P78344 907 aaKnown RBP eCLIP29.7■■■□□ 2.35
TTC9-201ENST00000256367 MRS2Q9HD23 443 aa29.67■■■□□ 2.34
TTC9-201ENST00000256367 MROH2BQ7Z745 1585 aa29.65■■■□□ 2.34
TTC9-201ENST00000256367 ANP32AP39687 249 aaKnown RBP29.64■■■□□ 2.33
TTC9-201ENST00000256367 MIER1Q8N108 512 aa29.61■■■□□ 2.33
TTC9-201ENST00000256367 WDR43Q15061 677 aaKnown RBP eCLIP29.6■■■□□ 2.33
TTC9-201ENST00000256367 SOGA1O94964 1423 aa29.6■■■□□ 2.33
TTC9-201ENST00000256367 CUX2O14529 1486 aa29.59■■■□□ 2.33
TTC9-201ENST00000256367 CARMIL1Q5VZK9 1371 aa29.59■■■□□ 2.33
TTC9-201ENST00000256367 CCDC88BA6NC98 1476 aa29.56■■■□□ 2.32
TTC9-201ENST00000256367 NPM2Q86SE8 214 aaKnown RBP29.53■■■□□ 2.32
TTC9-201ENST00000256367 RGL3Q3MIN7 710 aa29.53■■■□□ 2.32
TTC9-201ENST00000256367 FHAD1B1AJZ9 1412 aa29.49■■■□□ 2.31
TTC9-201ENST00000256367 SMARCA2P51531 1590 aa29.45■■■□□ 2.31
TTC9-201ENST00000256367 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.44■■■□□ 2.3
TTC9-201ENST00000256367 PPP1R15AO75807 674 aaPredicted RBP29.43■■■□□ 2.3
TTC9-201ENST00000256367 SENP3Q9H4L4 574 aaPredicted RBP29.42■■■□□ 2.3
TTC9-201ENST00000256367 CCDC136Q96JN2 1154 aa29.4■■■□□ 2.3
TTC9-201ENST00000256367 EIF4G1Q04637 1599 aaKnown RBP29.39■■■□□ 2.3
TTC9-201ENST00000256367 CCNB3Q8WWL7 1395 aa29.37■■■□□ 2.29
TTC9-201ENST00000256367 ABCC8Q09428 1581 aa29.37■■■□□ 2.29
TTC9-201ENST00000256367 SIN3AQ96ST3 1273 aa29.33■■■□□ 2.29
TTC9-201ENST00000256367 UPF2Q9HAU5 1272 aaKnown RBP29.31■■■□□ 2.28
TTC9-201ENST00000256367 CARD11Q9BXL7 1154 aa29.31■■■□□ 2.28
TTC9-201ENST00000256367 PDS5BQ9NTI5 1447 aa29.27■■■□□ 2.28
TTC9-201ENST00000256367 CDCA8Q53HL2 280 aa29.27■■■□□ 2.28
TTC9-201ENST00000256367 ARID4BQ4LE39 1312 aaPredicted RBP29.25■■■□□ 2.27
TTC9-201ENST00000256367 VPS8Q8N3P4 1428 aa29.24■■■□□ 2.27
TTC9-201ENST00000256367 TOP2AP11388 1531 aaKnown RBP29.22■■■□□ 2.27
TTC9-201ENST00000256367 HSP90AA1P07900 732 aaKnown RBP29.22■■■□□ 2.27
TTC9-201ENST00000256367 IRX6P78412 446 aaPredicted RBP29.21■■■□□ 2.27
TTC9-201ENST00000256367 SCAF1Q9H7N4 1312 aaKnown RBP29.2■■■□□ 2.26
TTC9-201ENST00000256367 KNSTRNQ9Y448 316 aa29.19■■■□□ 2.26
TTC9-201ENST00000256367 WIZO95785 1651 aa29.18■■■□□ 2.26
TTC9-201ENST00000256367 TDRD9Q8NDG6 1382 aaKnown RBP29.16■■■□□ 2.26
TTC9-201ENST00000256367 C14orf37Q86TY3 774 aa29.13■■■□□ 2.25
TTC9-201ENST00000256367 KANK4Q5T7N3 995 aaPredicted RBP29.11■■■□□ 2.25
TTC9-201ENST00000256367 CFAP53Q96M91 514 aa29.11■■■□□ 2.25
TTC9-201ENST00000256367 ARHGAP35Q9NRY4 1499 aa29.09■■■□□ 2.25
TTC9-201ENST00000256367 ZBTB7CA1YPR0 619 aa29.08■■■□□ 2.25
TTC9-201ENST00000256367 CADPSQ9ULU8 1353 aa29.07■■■□□ 2.24
TTC9-201ENST00000256367 CARMIL2Q6F5E8 1435 aa29.06■■■□□ 2.24
TTC9-201ENST00000256367 PLEKHG5O94827 1062 aa29.06■■■□□ 2.24
TTC9-201ENST00000256367 SETD5Q9C0A6 1442 aa29.04■■■□□ 2.24
TTC9-201ENST00000256367 TIMELESSQ9UNS1 1208 aa29.03■■■□□ 2.24
TTC9-201ENST00000256367 MYH16Q9H6N6 1097 aa29.01■■■□□ 2.23
TTC9-201ENST00000256367 DCAF11Q8TEB1 546 aa29■■■□□ 2.23
TTC9-201ENST00000256367 SENP3-EIF4A1A0A087X0R7 540 aa29■■■□□ 2.23
TTC9-201ENST00000256367 FMN1Q68DA7 1419 aa29■■■□□ 2.23
TTC9-201ENST00000256367 ATAD2BQ9ULI0 1458 aa28.99■■■□□ 2.23
TTC9-201ENST00000256367 POGKQ9P215 609 aa28.99■■■□□ 2.23
TTC9-201ENST00000256367 KANK1Q14678 1352 aa28.98■■■□□ 2.23
TTC9-201ENST00000256367 PPM1GO15355 546 aaPredicted RBP28.96■■■□□ 2.23
TTC9-201ENST00000256367 ANP32BQ92688 251 aaKnown RBP28.89■■■□□ 2.22
TTC9-201ENST00000256367 SMARCA4P51532 1647 aa28.89■■■□□ 2.21
TTC9-201ENST00000256367 A0A0G2JS52 829 aa28.89■■■□□ 2.21
TTC9-201ENST00000256367 RAPGEF2Q9Y4G8 1499 aa28.88■■■□□ 2.21
TTC9-201ENST00000256367 TMF1P82094 1093 aa28.87■■■□□ 2.21
TTC9-201ENST00000256367 PKD2Q13563 968 aa28.87■■■□□ 2.21
TTC9-201ENST00000256367 SUPT16HQ9Y5B9 1047 aaKnown RBP28.86■■■□□ 2.21
TTC9-201ENST00000256367 CC2D1BQ5T0F9 858 aaKnown RBP28.85■■■□□ 2.21
TTC9-201ENST00000256367 NUDCQ9Y266 331 aa28.85■■■□□ 2.21
TTC9-201ENST00000256367 NEUROD2Q15784 382 aa28.84■■■□□ 2.21
TTC9-201ENST00000256367 MAPK8IP3Q9UPT6 1336 aa28.82■■■□□ 2.2
TTC9-201ENST00000256367 TNNT2P45379 298 aaPredicted RBP28.8■■■□□ 2.2
TTC9-201ENST00000256367 RAB3GAP2Q9H2M9 1393 aa28.8■■■□□ 2.2
TTC9-201ENST00000256367 FOXD1Q16676 465 aa28.79■■■□□ 2.2
TTC9-201ENST00000256367 MLECQ14165 292 aa28.79■■■□□ 2.2
TTC9-201ENST00000256367 GGT6Q6P531 493 aa28.78■■■□□ 2.2
TTC9-201ENST00000256367 EFCAB2Q5VUJ9 269 aa28.78■■■□□ 2.2
TTC9-201ENST00000256367 FHOD3Q2V2M9 1422 aa28.78■■■□□ 2.2
TTC9-201ENST00000256367 HAP1P54257 671 aaPredicted RBP28.77■■■□□ 2.2
TTC9-201ENST00000256367 HSPA5P11021 654 aaKnown RBP28.75■■■□□ 2.19
TTC9-201ENST00000256367 MPHOSPH9Q99550 1183 aa28.75■■■□□ 2.19
TTC9-201ENST00000256367 ANKRD30AQ9BXX3 1397 aa28.73■■■□□ 2.19
TTC9-201ENST00000256367 NBR1Q14596 966 aa28.72■■■□□ 2.19
TTC9-201ENST00000256367 HDGFP51858 240 aaKnown RBP28.71■■■□□ 2.19
TTC9-201ENST00000256367 NUP155O75694 1391 aa28.71■■■□□ 2.19
TTC9-201ENST00000256367 FTSJ3Q8IY81 847 aaKnown RBP28.71■■■□□ 2.19
TTC9-201ENST00000256367 TRHP20396 242 aaPredicted RBP28.71■■■□□ 2.19
TTC9-201ENST00000256367 LAS1LQ9Y4W2 734 aaKnown RBP28.7■■■□□ 2.18
TTC9-201ENST00000256367 LMOD2Q6P5Q4 547 aa28.68■■■□□ 2.18
TTC9-201ENST00000256367 U2SURPO15042 1029 aaKnown RBP28.67■■■□□ 2.18
TTC9-201ENST00000256367 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
TTC9-201ENST00000256367 SRPK2P78362 688 aaKnown RBP28.65■■■□□ 2.18
TTC9-201ENST00000256367 JPH4Q96JJ6 628 aa28.65■■■□□ 2.18
TTC9-201ENST00000256367 CCER2I3L3R5 266 aa28.62■■■□□ 2.17
TTC9-201ENST00000256367 RUSC2Q8N2Y8 1516 aa28.62■■■□□ 2.17
TTC9-201ENST00000256367 EIF5BO60841 1220 aaKnown RBP28.61■■■□□ 2.17
TTC9-201ENST00000256367 SAFB2Q14151 953 aaKnown RBP eCLIP28.61■■■□□ 2.17
TTC9-201ENST00000256367 DDRGK1Q96HY6 314 aa28.6■■■□□ 2.17
TTC9-201ENST00000256367 BECN1Q14457 450 aa28.59■■■□□ 2.17
TTC9-201ENST00000256367 HNRNPMP52272 730 aaKnown RBP eCLIP28.59■■■□□ 2.17
TTC9-201ENST00000256367 PPP4R2Q9NY27 417 aa28.59■■■□□ 2.17
TTC9-201ENST00000256367 CCDC18Q5T9S5 1454 aa28.59■■■□□ 2.17
TTC9-201ENST00000256367 FRAT1Q92837 279 aaPredicted RBP28.58■■■□□ 2.17
TTC9-201ENST00000256367 PNNQ9H307 717 aaKnown RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms