RNA–Protein interactions for RNA: ENST00000254190.3

CHSY1-201, Transcript of chondroitin sulfate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHSY1, Length 4,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHSY1-201ENST00000254190 TSPY4P0CV99 314 aa32.31■■■□□ 2.76
CHSY1-201ENST00000254190 TSPY10P0CW01 314 aa32.31■■■□□ 2.76
CHSY1-201ENST00000254190 SLC24A1O60721 1099 aa32.28■■■□□ 2.76
CHSY1-201ENST00000254190 KIF27Q86VH2 1401 aa32.2■■■□□ 2.75
CHSY1-201ENST00000254190 NACADO15069 1562 aa32.17■■■□□ 2.74
CHSY1-201ENST00000254190 EIF5BO60841 1220 aaKnown RBP32.16■■■□□ 2.74
CHSY1-201ENST00000254190 BAZ1BQ9UIG0 1483 aaKnown RBP32.15■■■□□ 2.74
CHSY1-201ENST00000254190 WDR43Q15061 677 aaKnown RBP eCLIP32.13■■■□□ 2.73
CHSY1-201ENST00000254190 ANP32EQ9BTT0 268 aa32.11■■■□□ 2.73
CHSY1-201ENST00000254190 BAZ1AQ9NRL2 1556 aaPredicted RBP32.11■■■□□ 2.73
CHSY1-201ENST00000254190 CCNB3Q8WWL7 1395 aa32.1■■■□□ 2.73
CHSY1-201ENST00000254190 UPF2Q9HAU5 1272 aaKnown RBP32.07■■■□□ 2.72
CHSY1-201ENST00000254190 RGL3Q3MIN7 710 aa32.05■■■□□ 2.72
CHSY1-201ENST00000254190 CHMP7Q8WUX9 453 aaPredicted RBP32.04■■■□□ 2.72
CHSY1-201ENST00000254190 KANK4Q5T7N3 995 aaPredicted RBP32.04■■■□□ 2.72
CHSY1-201ENST00000254190 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.04■■■□□ 2.72
CHSY1-201ENST00000254190 MROH2BQ7Z745 1585 aa32.04■■■□□ 2.72
CHSY1-201ENST00000254190 CCDC88BA6NC98 1476 aa32.02■■■□□ 2.72
CHSY1-201ENST00000254190 HSP90AA1P07900 732 aaKnown RBP32.02■■■□□ 2.72
CHSY1-201ENST00000254190 ABCC8Q09428 1581 aa31.99■■■□□ 2.71
CHSY1-201ENST00000254190 ARXQ96QS3 562 aa31.94■■■□□ 2.7
CHSY1-201ENST00000254190 VPS8Q8N3P4 1428 aa31.94■■■□□ 2.7
CHSY1-201ENST00000254190 CFDP1Q9UEE9 299 aaPredicted RBP31.9■■■□□ 2.7
CHSY1-201ENST00000254190 STAG3Q9UJ98 1225 aa31.88■■■□□ 2.69
CHSY1-201ENST00000254190 PLEKHD1A6NEE1 506 aa31.87■■■□□ 2.69
CHSY1-201ENST00000254190 CARD11Q9BXL7 1154 aa31.86■■■□□ 2.69
CHSY1-201ENST00000254190 B4GALNT3Q6L9W6 998 aa31.86■■■□□ 2.69
CHSY1-201ENST00000254190 PPP4R2Q9NY27 417 aa31.85■■■□□ 2.69
CHSY1-201ENST00000254190 KCNH8Q96L42 1107 aa31.82■■■□□ 2.68
CHSY1-201ENST00000254190 SENP3Q9H4L4 574 aaPredicted RBP31.79■■■□□ 2.68
CHSY1-201ENST00000254190 CARMIL1Q5VZK9 1371 aa31.78■■■□□ 2.68
CHSY1-201ENST00000254190 TIMELESSQ9UNS1 1208 aa31.75■■■□□ 2.67
CHSY1-201ENST00000254190 ANP32BQ92688 251 aaKnown RBP31.74■■■□□ 2.67
CHSY1-201ENST00000254190 NPM1P06748 294 aaKnown RBP eCLIP31.74■■■□□ 2.67
CHSY1-201ENST00000254190 SETD5Q9C0A6 1442 aa31.71■■■□□ 2.67
CHSY1-201ENST00000254190 CUX2O14529 1486 aa31.7■■■□□ 2.67
CHSY1-201ENST00000254190 FHAD1B1AJZ9 1412 aa31.7■■■□□ 2.66
CHSY1-201ENST00000254190 ESF1Q9H501 851 aaKnown RBP31.7■■■□□ 2.66
CHSY1-201ENST00000254190 CCER2I3L3R5 266 aa31.69■■■□□ 2.66
CHSY1-201ENST00000254190 RBM19Q9Y4C8 960 aaKnown RBP31.68■■■□□ 2.66
CHSY1-201ENST00000254190 RAB3GAP2Q9H2M9 1393 aa31.66■■■□□ 2.66
CHSY1-201ENST00000254190 KNSTRNQ9Y448 316 aa31.64■■■□□ 2.66
CHSY1-201ENST00000254190 HSPA5P11021 654 aaKnown RBP31.63■■■□□ 2.65
CHSY1-201ENST00000254190 FOXD1Q16676 465 aa31.6■■■□□ 2.65
CHSY1-201ENST00000254190 PLPPR3Q6T4P5 718 aa31.6■■■□□ 2.65
CHSY1-201ENST00000254190 LAS1LQ9Y4W2 734 aaKnown RBP31.58■■■□□ 2.65
CHSY1-201ENST00000254190 DDRGK1Q96HY6 314 aa31.58■■■□□ 2.65
CHSY1-201ENST00000254190 NEUROD2Q15784 382 aa31.56■■■□□ 2.64
CHSY1-201ENST00000254190 CC2D1BQ5T0F9 858 aaKnown RBP31.54■■■□□ 2.64
CHSY1-201ENST00000254190 NOP58Q9Y2X3 529 aaKnown RBP31.53■■■□□ 2.64
CHSY1-201ENST00000254190 WIZO95785 1651 aa31.52■■■□□ 2.64
CHSY1-201ENST00000254190 RGS3P49796 1198 aa31.52■■■□□ 2.64
CHSY1-201ENST00000254190 PPP1R15AO75807 674 aaPredicted RBP31.52■■■□□ 2.64
CHSY1-201ENST00000254190 DCAF11Q8TEB1 546 aa31.51■■■□□ 2.64
CHSY1-201ENST00000254190 TSHZ2Q9NRE2 1034 aa31.51■■■□□ 2.64
CHSY1-201ENST00000254190 BECN1Q14457 450 aa31.46■■■□□ 2.63
CHSY1-201ENST00000254190 RUSC2Q8N2Y8 1516 aa31.45■■■□□ 2.63
CHSY1-201ENST00000254190 CDCA8Q53HL2 280 aa31.45■■■□□ 2.62
CHSY1-201ENST00000254190 ARHGAP35Q9NRY4 1499 aa31.41■■■□□ 2.62
CHSY1-201ENST00000254190 PPM1GO15355 546 aaPredicted RBP31.4■■■□□ 2.62
CHSY1-201ENST00000254190 RAPGEF2Q9Y4G8 1499 aa31.37■■■□□ 2.61
CHSY1-201ENST00000254190 TNNT2P45379 298 aaPredicted RBP31.37■■■□□ 2.61
CHSY1-201ENST00000254190 FRAT1Q92837 279 aaPredicted RBP31.36■■■□□ 2.61
CHSY1-201ENST00000254190 RTN4Q9NQC3 1192 aaKnown RBP31.36■■■□□ 2.61
CHSY1-201ENST00000254190 MYH16Q9H6N6 1097 aa31.35■■■□□ 2.61
CHSY1-201ENST00000254190 DHX57Q6P158 1386 aaKnown RBP31.34■■■□□ 2.61
CHSY1-201ENST00000254190 CFAP53Q96M91 514 aa31.34■■■□□ 2.61
CHSY1-201ENST00000254190 PKD2Q13563 968 aa31.33■■■□□ 2.61
CHSY1-201ENST00000254190 MPHOSPH9Q99550 1183 aa31.33■■■□□ 2.61
CHSY1-201ENST00000254190 EIF4G1Q04637 1599 aaKnown RBP31.29■■■□□ 2.6
CHSY1-201ENST00000254190 TOP2AP11388 1531 aaKnown RBP31.27■■■□□ 2.6
CHSY1-201ENST00000254190 FTSJ3Q8IY81 847 aaKnown RBP31.27■■■□□ 2.6
CHSY1-201ENST00000254190 L3MBTL2Q969R5 705 aa31.26■■■□□ 2.6
CHSY1-201ENST00000254190 TMF1P82094 1093 aa31.23■■■□□ 2.59
CHSY1-201ENST00000254190 TDRD9Q8NDG6 1382 aaKnown RBP31.22■■■□□ 2.59
CHSY1-201ENST00000254190 DEKP35659 375 aaKnown RBP31.21■■■□□ 2.59
CHSY1-201ENST00000254190 GLIPR1L2Q4G1C9 344 aa31.17■■■□□ 2.58
CHSY1-201ENST00000254190 ERICH6BQ5W0A0 696 aa31.15■■■□□ 2.58
CHSY1-201ENST00000254190 PLEKHG5O94827 1062 aa31.14■■■□□ 2.58
CHSY1-201ENST00000254190 FHOD3Q2V2M9 1422 aa31.13■■■□□ 2.57
CHSY1-201ENST00000254190 TRIM44Q96DX7 344 aaPredicted RBP31.13■■■□□ 2.57
CHSY1-201ENST00000254190 FMN1Q68DA7 1419 aa31.1■■■□□ 2.57
CHSY1-201ENST00000254190 MAPK8IP3Q9UPT6 1336 aa31.1■■■□□ 2.57
CHSY1-201ENST00000254190 RCAN3Q9UKA8 241 aa31.1■■■□□ 2.57
CHSY1-201ENST00000254190 U2SURPO15042 1029 aaKnown RBP31.09■■■□□ 2.57
CHSY1-201ENST00000254190 NCLP19338 710 aaKnown RBP31.08■■■□□ 2.57
CHSY1-201ENST00000254190 SMARCA2P51531 1590 aa31.06■■■□□ 2.56
CHSY1-201ENST00000254190 NUDCQ9Y266 331 aa31.06■■■□□ 2.56
CHSY1-201ENST00000254190 GOLGA6L22H0YM25 854 aa31.06■■■□□ 2.56
CHSY1-201ENST00000254190 NUP155O75694 1391 aa31.03■■■□□ 2.56
CHSY1-201ENST00000254190 KTN1Q86UP2 1357 aaKnown RBP31.01■■■□□ 2.55
CHSY1-201ENST00000254190 C14orf37Q86TY3 774 aa31■■■□□ 2.55
CHSY1-201ENST00000254190 ZBTB7CA1YPR0 619 aa30.99■■■□□ 2.55
CHSY1-201ENST00000254190 POGKQ9P215 609 aa30.99■■■□□ 2.55
CHSY1-201ENST00000254190 RALBP1Q15311 655 aa30.94■■■□□ 2.54
CHSY1-201ENST00000254190 ROCK2O75116 1388 aaKnown RBP30.93■■■□□ 2.54
CHSY1-201ENST00000254190 SAFB2Q14151 953 aaKnown RBP eCLIP30.92■■■□□ 2.54
CHSY1-201ENST00000254190 MORC1Q86VD1 984 aa30.91■■■□□ 2.54
CHSY1-201ENST00000254190 TPRNQ4KMQ1 711 aa30.91■■■□□ 2.54
CHSY1-201ENST00000254190 SPRYD3Q8NCJ5 442 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms