RNA–Protein interactions for RNA: ENST00000252085.3

PCDHGA12-201, Transcript of protocadherin gamma subfamily A, 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA12, Length 4,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12-201ENST00000252085 MRS2Q9HD23 443 aa17.23■□□□□ 0.35
PCDHGA12-201ENST00000252085 TMC1Q8TDI8 760 aa17.23■□□□□ 0.35
PCDHGA12-201ENST00000252085 SALL2Q9Y467 1007 aaPredicted RBP17.22■□□□□ 0.35
PCDHGA12-201ENST00000252085 ABCC8Q09428 1581 aa17.22■□□□□ 0.35
PCDHGA12-201ENST00000252085 PLEKHD1A6NEE1 506 aa17.21■□□□□ 0.35
PCDHGA12-201ENST00000252085 ZBTB47Q9UFB7 747 aaPredicted RBP17.21■□□□□ 0.35
PCDHGA12-201ENST00000252085 CARMIL1Q5VZK9 1371 aa17.18■□□□□ 0.34
PCDHGA12-201ENST00000252085 CUX2O14529 1486 aa17.18■□□□□ 0.34
PCDHGA12-201ENST00000252085 ESF1Q9H501 851 aaKnown RBP17.18■□□□□ 0.34
PCDHGA12-201ENST00000252085 STAG3Q9UJ98 1225 aa17.17■□□□□ 0.34
PCDHGA12-201ENST00000252085 ANP32EQ9BTT0 268 aa17.16■□□□□ 0.34
PCDHGA12-201ENST00000252085 ANP32AP39687 249 aaKnown RBP17.16■□□□□ 0.34
PCDHGA12-201ENST00000252085 KCNH8Q96L42 1107 aa17.15■□□□□ 0.34
PCDHGA12-201ENST00000252085 CFDP1Q9UEE9 299 aaPredicted RBP17.15■□□□□ 0.34
PCDHGA12-201ENST00000252085 SIN3AQ96ST3 1273 aa17.15■□□□□ 0.34
PCDHGA12-201ENST00000252085 SLC24A1O60721 1099 aa17.14■□□□□ 0.33
PCDHGA12-201ENST00000252085 CCNB3Q8WWL7 1395 aa17.14■□□□□ 0.33
PCDHGA12-201ENST00000252085 NPM2Q86SE8 214 aaKnown RBP17.12■□□□□ 0.33
PCDHGA12-201ENST00000252085 VPS8Q8N3P4 1428 aa17.12■□□□□ 0.33
PCDHGA12-201ENST00000252085 FHAD1B1AJZ9 1412 aa17.11■□□□□ 0.33
PCDHGA12-201ENST00000252085 WIZO95785 1651 aa17.11■□□□□ 0.33
PCDHGA12-201ENST00000252085 SMARCA2P51531 1590 aa17.07■□□□□ 0.32
PCDHGA12-201ENST00000252085 RGL3Q3MIN7 710 aa17.07■□□□□ 0.32
PCDHGA12-201ENST00000252085 TOP2AP11388 1531 aaKnown RBP17.06■□□□□ 0.32
PCDHGA12-201ENST00000252085 IRX6P78412 446 aaPredicted RBP17.06■□□□□ 0.32
PCDHGA12-201ENST00000252085 CCDC136Q96JN2 1154 aa17.06■□□□□ 0.32
PCDHGA12-201ENST00000252085 KANK4Q5T7N3 995 aaPredicted RBP17.06■□□□□ 0.32
PCDHGA12-201ENST00000252085 WDR43Q15061 677 aaKnown RBP eCLIP17.05■□□□□ 0.32
PCDHGA12-201ENST00000252085 PLPPR3Q6T4P5 718 aa17.01■□□□□ 0.31
PCDHGA12-201ENST00000252085 ERCC6Q03468 1493 aa16.99■□□□□ 0.31
PCDHGA12-201ENST00000252085 CARD11Q9BXL7 1154 aa16.96■□□□□ 0.31
PCDHGA12-201ENST00000252085 EIF4G1Q04637 1599 aaKnown RBP16.96■□□□□ 0.31
PCDHGA12-201ENST00000252085 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.96■□□□□ 0.31
PCDHGA12-201ENST00000252085 NBR1Q14596 966 aa16.95■□□□□ 0.3
PCDHGA12-201ENST00000252085 SETD5Q9C0A6 1442 aa16.93■□□□□ 0.3
PCDHGA12-201ENST00000252085 TDRD9Q8NDG6 1382 aaKnown RBP16.92■□□□□ 0.3
PCDHGA12-201ENST00000252085 SENP3-EIF4A1A0A087X0R7 540 aa16.92■□□□□ 0.3
PCDHGA12-201ENST00000252085 SENP3Q9H4L4 574 aaPredicted RBP16.92■□□□□ 0.3
PCDHGA12-201ENST00000252085 TIMELESSQ9UNS1 1208 aa16.92■□□□□ 0.3
PCDHGA12-201ENST00000252085 ATAD2BQ9ULI0 1458 aa16.91■□□□□ 0.3
PCDHGA12-201ENST00000252085 ARHGAP35Q9NRY4 1499 aa16.89■□□□□ 0.29
PCDHGA12-201ENST00000252085 SMARCA4P51532 1647 aa16.87■□□□□ 0.29
PCDHGA12-201ENST00000252085 CADPSQ9ULU8 1353 aa16.87■□□□□ 0.29
PCDHGA12-201ENST00000252085 SUPT16HQ9Y5B9 1047 aaKnown RBP16.87■□□□□ 0.29
PCDHGA12-201ENST00000252085 RAPGEF2Q9Y4G8 1499 aa16.86■□□□□ 0.29
PCDHGA12-201ENST00000252085 UPF2Q9HAU5 1272 aaKnown RBP16.86■□□□□ 0.29
PCDHGA12-201ENST00000252085 PDS5BQ9NTI5 1447 aa16.86■□□□□ 0.29
PCDHGA12-201ENST00000252085 RUSC2Q8N2Y8 1516 aa16.85■□□□□ 0.29
PCDHGA12-201ENST00000252085 RAB3GAP2Q9H2M9 1393 aa16.84■□□□□ 0.29
PCDHGA12-201ENST00000252085 KNSTRNQ9Y448 316 aa16.84■□□□□ 0.29
PCDHGA12-201ENST00000252085 CDCA8Q53HL2 280 aa16.83■□□□□ 0.29
PCDHGA12-201ENST00000252085 FMN1Q68DA7 1419 aa16.82■□□□□ 0.28
PCDHGA12-201ENST00000252085 PPP1R15AO75807 674 aaPredicted RBP16.79■□□□□ 0.28
PCDHGA12-201ENST00000252085 DCAF11Q8TEB1 546 aa16.79■□□□□ 0.28
PCDHGA12-201ENST00000252085 HSP90AA1P07900 732 aaKnown RBP16.79■□□□□ 0.28
PCDHGA12-201ENST00000252085 FOXD1Q16676 465 aa16.78■□□□□ 0.28
PCDHGA12-201ENST00000252085 FHOD3Q2V2M9 1422 aa16.77■□□□□ 0.27
PCDHGA12-201ENST00000252085 HSPA5P11021 654 aaKnown RBP16.76■□□□□ 0.27
PCDHGA12-201ENST00000252085 PKD2Q13563 968 aa16.75■□□□□ 0.27
PCDHGA12-201ENST00000252085 ANP32BQ92688 251 aaKnown RBP16.74■□□□□ 0.27
PCDHGA12-201ENST00000252085 CCER2I3L3R5 266 aa16.72■□□□□ 0.27
PCDHGA12-201ENST00000252085 CFAP53Q96M91 514 aa16.72■□□□□ 0.27
PCDHGA12-201ENST00000252085 MPHOSPH9Q99550 1183 aa16.72■□□□□ 0.27
PCDHGA12-201ENST00000252085 CARMIL2Q6F5E8 1435 aa16.72■□□□□ 0.27
PCDHGA12-201ENST00000252085 CC2D1BQ5T0F9 858 aaKnown RBP16.71■□□□□ 0.26
PCDHGA12-201ENST00000252085 PPP4R2Q9NY27 417 aa16.68■□□□□ 0.26
PCDHGA12-201ENST00000252085 TMF1P82094 1093 aa16.67■□□□□ 0.26
PCDHGA12-201ENST00000252085 RTN4Q9NQC3 1192 aaKnown RBP16.67■□□□□ 0.26
PCDHGA12-201ENST00000252085 NEUROD2Q15784 382 aa16.67■□□□□ 0.26
PCDHGA12-201ENST00000252085 PPM1GO15355 546 aaPredicted RBP16.65■□□□□ 0.26
PCDHGA12-201ENST00000252085 ARID4BQ4LE39 1312 aaPredicted RBP16.64■□□□□ 0.25
PCDHGA12-201ENST00000252085 NUP155O75694 1391 aa16.63■□□□□ 0.25
PCDHGA12-201ENST00000252085 TNNT2P45379 298 aaPredicted RBP16.63■□□□□ 0.25
PCDHGA12-201ENST00000252085 MYH16Q9H6N6 1097 aa16.63■□□□□ 0.25
PCDHGA12-201ENST00000252085 POGKQ9P215 609 aa16.62■□□□□ 0.25
PCDHGA12-201ENST00000252085 DHX57Q6P158 1386 aaKnown RBP16.62■□□□□ 0.25
PCDHGA12-201ENST00000252085 FANCD2Q9BXW9 1451 aa16.62■□□□□ 0.25
PCDHGA12-201ENST00000252085 KANK1Q14678 1352 aa16.62■□□□□ 0.25
PCDHGA12-201ENST00000252085 ANKRD30AQ9BXX3 1397 aa16.61■□□□□ 0.25
PCDHGA12-201ENST00000252085 C14orf37Q86TY3 774 aa16.61■□□□□ 0.25
PCDHGA12-201ENST00000252085 L3MBTL2Q969R5 705 aa16.61■□□□□ 0.25
PCDHGA12-201ENST00000252085 ERICH6BQ5W0A0 696 aa16.6■□□□□ 0.25
PCDHGA12-201ENST00000252085 PLEKHG5O94827 1062 aa16.6■□□□□ 0.25
PCDHGA12-201ENST00000252085 B4GALNT3Q6L9W6 998 aa16.6■□□□□ 0.25
PCDHGA12-201ENST00000252085 ZBTB7CA1YPR0 619 aa16.58■□□□□ 0.24
PCDHGA12-201ENST00000252085 EFCAB2Q5VUJ9 269 aa16.58■□□□□ 0.24
PCDHGA12-201ENST00000252085 NUDCQ9Y266 331 aa16.58■□□□□ 0.24
PCDHGA12-201ENST00000252085 IGF1RP08069 1367 aa16.57■□□□□ 0.24
PCDHGA12-201ENST00000252085 JPH4Q96JJ6 628 aa16.57■□□□□ 0.24
PCDHGA12-201ENST00000252085 MAPK8IP3Q9UPT6 1336 aa16.56■□□□□ 0.24
PCDHGA12-201ENST00000252085 GGT6Q6P531 493 aa16.56■□□□□ 0.24
PCDHGA12-201ENST00000252085 HNRNPMP52272 730 aaKnown RBP eCLIP16.55■□□□□ 0.24
PCDHGA12-201ENST00000252085 DDRGK1Q96HY6 314 aa16.55■□□□□ 0.24
PCDHGA12-201ENST00000252085 CCDC18Q5T9S5 1454 aa16.54■□□□□ 0.24
PCDHGA12-201ENST00000252085 FTSJ3Q8IY81 847 aaKnown RBP16.54■□□□□ 0.24
PCDHGA12-201ENST00000252085 DEKP35659 375 aaKnown RBP16.53■□□□□ 0.24
PCDHGA12-201ENST00000252085 FRAT1Q92837 279 aaPredicted RBP16.53■□□□□ 0.24
PCDHGA12-201ENST00000252085 ARXQ96QS3 562 aa16.53■□□□□ 0.24
PCDHGA12-201ENST00000252085 U2SURPO15042 1029 aaKnown RBP16.52■□□□□ 0.24
PCDHGA12-201ENST00000252085 ROCK2O75116 1388 aaKnown RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms