RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 PLCB2Q00722 1185 aa18.17■□□□□ 0.5
TARDBP-201ENST00000240185 CSRNP3Q8WYN3 585 aa18.17■□□□□ 0.5
TARDBP-201ENST00000240185 DEKP35659 375 aaKnown RBP18.16■□□□□ 0.5
TARDBP-201ENST00000240185 FBLN2P98095 1184 aa18.15■□□□□ 0.5
TARDBP-201ENST00000240185 SUPT16HQ9Y5B9 1047 aaKnown RBP18.13■□□□□ 0.49
TARDBP-201ENST00000240185 HIRIP3Q9BW71 556 aaPredicted RBP18.13■□□□□ 0.49
TARDBP-201ENST00000240185 ARID4BQ4LE39 1312 aaPredicted RBP18.09■□□□□ 0.49
TARDBP-201ENST00000240185 CHAF1AQ13111 956 aaPredicted RBP18.07■□□□□ 0.48
TARDBP-201ENST00000240185 ZCCHC6Q5VYS8 1495 aaKnown RBP18.07■□□□□ 0.48
TARDBP-201ENST00000240185 STAG3Q9UJ98 1225 aa18.06■□□□□ 0.48
TARDBP-201ENST00000240185 MSNP26038 577 aaKnown RBP18.05■□□□□ 0.48
TARDBP-201ENST00000240185 PPP4R2Q9NY27 417 aa18.05■□□□□ 0.48
TARDBP-201ENST00000240185 DCAF1Q9Y4B6 1507 aa18.04■□□□□ 0.48
TARDBP-201ENST00000240185 CASC1Q6TDU7 716 aa18.04■□□□□ 0.48
TARDBP-201ENST00000240185 GOLGA6L6A8MZA4 724 aa18.04■□□□□ 0.48
TARDBP-201ENST00000240185 L1TD1Q5T7N2 865 aaKnown RBP18.03■□□□□ 0.48
TARDBP-201ENST00000240185 NRDCO43847 1150 aa18.03■□□□□ 0.48
TARDBP-201ENST00000240185 RGS3P49796 1198 aa18.02■□□□□ 0.48
TARDBP-201ENST00000240185 KDM2AQ9Y2K7 1162 aa18.02■□□□□ 0.48
TARDBP-201ENST00000240185 EIF4G2P78344 907 aaKnown RBP eCLIP18.01■□□□□ 0.478e-11■■□□□ 12.1
TARDBP-201ENST00000240185 SENP3-EIF4A1A0A087X0R7 540 aa18.01■□□□□ 0.47
TARDBP-201ENST00000240185 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.99■□□□□ 0.47
TARDBP-201ENST00000240185 ESF1Q9H501 851 aaKnown RBP17.99■□□□□ 0.47
TARDBP-201ENST00000240185 CHIC2Q9UKJ5 165 aa17.98■□□□□ 0.47
TARDBP-201ENST00000240185 HSP90AB1P08238 724 aaKnown RBP17.98■□□□□ 0.47
TARDBP-201ENST00000240185 FTSJ3Q8IY81 847 aaKnown RBP17.94■□□□□ 0.46
TARDBP-201ENST00000240185 TNNT3P45378 269 aaPredicted RBP17.93■□□□□ 0.46
TARDBP-201ENST00000240185 ARID3AQ99856 593 aa17.92■□□□□ 0.46
TARDBP-201ENST00000240185 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.92■□□□□ 0.462e-9■■□□□ 13.4
TARDBP-201ENST00000240185 TULP1O00294 542 aaPredicted RBP17.92■□□□□ 0.46
TARDBP-201ENST00000240185 PNNQ9H307 717 aaKnown RBP17.92■□□□□ 0.46
TARDBP-201ENST00000240185 B4GALNT3Q6L9W6 998 aa17.92■□□□□ 0.46
TARDBP-201ENST00000240185 RBM19Q9Y4C8 960 aaKnown RBP17.9■□□□□ 0.46
TARDBP-201ENST00000240185 GOLGA6L4A6NEF3 574 aa17.86■□□□□ 0.45
TARDBP-201ENST00000240185 HSCBQ8IWL3 235 aa17.86■□□□□ 0.45
TARDBP-201ENST00000240185 DRC7Q8IY82 874 aa17.85■□□□□ 0.45
TARDBP-201ENST00000240185 TAOK2Q9UL54 1235 aa17.84■□□□□ 0.45
TARDBP-201ENST00000240185 ZBTB7CA1YPR0 619 aa17.84■□□□□ 0.45
TARDBP-201ENST00000240185 FRAT1Q92837 279 aaPredicted RBP17.81■□□□□ 0.44
TARDBP-201ENST00000240185 FGD1P98174 961 aa17.81■□□□□ 0.44
TARDBP-201ENST00000240185 CFAP53Q96M91 514 aa17.81■□□□□ 0.44
TARDBP-201ENST00000240185 A0A0G2JS52 829 aa17.81■□□□□ 0.44
TARDBP-201ENST00000240185 SPRYD3Q8NCJ5 442 aa17.8■□□□□ 0.44
TARDBP-201ENST00000240185 PABPN1Q86U42 306 aaKnown RBP eCLIP17.8■□□□□ 0.44
TARDBP-201ENST00000240185 KIAA2012Q0VF49 1180 aa17.79■□□□□ 0.44
TARDBP-201ENST00000240185 PLPPR3Q6T4P5 718 aa17.79■□□□□ 0.44
TARDBP-201ENST00000240185 NEUROD2Q15784 382 aa17.79■□□□□ 0.44
TARDBP-201ENST00000240185 TSPY4P0CV99 314 aa17.76■□□□□ 0.43
TARDBP-201ENST00000240185 TSPY10P0CW01 314 aa17.76■□□□□ 0.43
TARDBP-201ENST00000240185 KCNJ4P48050 445 aa17.75■□□□□ 0.43
TARDBP-201ENST00000240185 KNSTRNQ9Y448 316 aa17.75■□□□□ 0.43
TARDBP-201ENST00000240185 GZF1Q9H116 711 aaPredicted RBP17.75■□□□□ 0.43
TARDBP-201ENST00000240185 NAP1L2Q9ULW6 460 aaPredicted RBP17.74■□□□□ 0.43
TARDBP-201ENST00000240185 CHMP4BQ9H444 224 aaKnown RBP17.72■□□□□ 0.43
TARDBP-201ENST00000240185 HSP90AA2PQ14568 343 aaPredicted RBP17.71■□□□□ 0.43
TARDBP-201ENST00000240185 MS4A1P11836 297 aa17.7■□□□□ 0.42
TARDBP-201ENST00000240185 GBP4Q96PP9 640 aa17.7■□□□□ 0.42
TARDBP-201ENST00000240185 VSIG10Q8N0Z9 540 aa17.69■□□□□ 0.42
TARDBP-201ENST00000240185 MAPK8IP3Q9UPT6 1336 aa17.69■□□□□ 0.42
TARDBP-201ENST00000240185 PLEKHG5O94827 1062 aa17.68■□□□□ 0.42
TARDBP-201ENST00000240185 C14orf37Q86TY3 774 aa17.68■□□□□ 0.42
TARDBP-201ENST00000240185 OS9Q13438 667 aaPredicted RBP17.66■□□□□ 0.42
TARDBP-201ENST00000240185 CDCA8Q53HL2 280 aa17.66■□□□□ 0.42
TARDBP-201ENST00000240185 RRP7BPQ9NSQ0 103 aa17.66■□□□□ 0.42
TARDBP-201ENST00000240185 GOLGA6L3A6NEY3 463 aa17.66■□□□□ 0.42
TARDBP-201ENST00000240185 PTMSP20962 102 aa17.66■□□□□ 0.42
TARDBP-201ENST00000240185 SLKQ9H2G2 1235 aaPredicted RBP17.66■□□□□ 0.42
TARDBP-201ENST00000240185 MTUS2Q5JR59 1369 aa17.65■□□□□ 0.42
TARDBP-201ENST00000240185 MCCP23508 829 aa17.64■□□□□ 0.42
TARDBP-201ENST00000240185 ABCC9O60706 1549 aa17.63■□□□□ 0.41
TARDBP-201ENST00000240185 RGL3Q3MIN7 710 aa17.63■□□□□ 0.41
TARDBP-201ENST00000240185 SENP3Q9H4L4 574 aaPredicted RBP17.62■□□□□ 0.41
TARDBP-201ENST00000240185 NUDCQ9Y266 331 aa17.62■□□□□ 0.41
TARDBP-201ENST00000240185 GOLGA6L1Q8N7Z2 621 aa17.61■□□□□ 0.41
TARDBP-201ENST00000240185 NOC3LQ8WTT2 800 aaKnown RBP17.61■□□□□ 0.41
TARDBP-201ENST00000240185 RSPH6AQ9H0K4 717 aa17.61■□□□□ 0.41
TARDBP-201ENST00000240185 CARD11Q9BXL7 1154 aa17.6■□□□□ 0.41
TARDBP-201ENST00000240185 TSHZ2Q9NRE2 1034 aa17.6■□□□□ 0.41
TARDBP-201ENST00000240185 NCBP3Q53F19 620 aaKnown RBP17.57■□□□□ 0.4
TARDBP-201ENST00000240185 SYAP1Q96A49 352 aaPredicted RBP17.57■□□□□ 0.4
TARDBP-201ENST00000240185 CFAP44Q96MT7 982 aa17.57■□□□□ 0.4
TARDBP-201ENST00000240185 IPO9Q96P70 1041 aaKnown RBP17.56■□□□□ 0.4
TARDBP-201ENST00000240185 NPM1P06748 294 aaKnown RBP eCLIP17.54■□□□□ 0.4
TARDBP-201ENST00000240185 TCERG1O14776 1098 aaKnown RBP17.54■□□□□ 0.4
TARDBP-201ENST00000240185 CLSTN1O94985 981 aa17.54■□□□□ 0.4
TARDBP-201ENST00000240185 CC2D1BQ5T0F9 858 aaKnown RBP17.53■□□□□ 0.4
TARDBP-201ENST00000240185 PPP1R15AO75807 674 aaPredicted RBP17.52■□□□□ 0.4
TARDBP-201ENST00000240185 GNL2Q13823 731 aaKnown RBP17.52■□□□□ 0.39
TARDBP-201ENST00000240185 U2SURPO15042 1029 aaKnown RBP17.5■□□□□ 0.39
TARDBP-201ENST00000240185 A0A0U1RQG5 324 aaPredicted RBP17.5■□□□□ 0.39
TARDBP-201ENST00000240185 CALD1Q05682 793 aaKnown RBP17.49■□□□□ 0.39
TARDBP-201ENST00000240185 CCER2I3L3R5 266 aa17.48■□□□□ 0.39
TARDBP-201ENST00000240185 CLIP1P30622 1438 aa17.48■□□□□ 0.39
TARDBP-201ENST00000240185 HTATSF1O43719 755 aaKnown RBP17.48■□□□□ 0.39
TARDBP-201ENST00000240185 SETQ01105 290 aaPredicted RBP17.48■□□□□ 0.39
TARDBP-201ENST00000240185 SCRIBQ14160 1630 aa17.47■□□□□ 0.39
TARDBP-201ENST00000240185 TPM4P67936 248 aa17.47■□□□□ 0.39
TARDBP-201ENST00000240185 SIN3AQ96ST3 1273 aa17.47■□□□□ 0.39
TARDBP-201ENST00000240185 KIAA1211Q6ZU35 1233 aa17.46■□□□□ 0.39
TARDBP-201ENST00000240185 GOLGA2Q08379 1002 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms