RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 SIN3AQ96ST3 1273 aa12.73□□□□□ -0.37
NUDCD1-201ENST00000239690 TIMELESSQ9UNS1 1208 aa12.73□□□□□ -0.37
NUDCD1-201ENST00000239690 SALL2Q9Y467 1007 aaPredicted RBP12.72□□□□□ -0.37
NUDCD1-201ENST00000239690 UPF2Q9HAU5 1272 aaKnown RBP12.72□□□□□ -0.37
NUDCD1-201ENST00000239690 PABPN1Q86U42 306 aaKnown RBP eCLIP12.71□□□□□ -0.37
NUDCD1-201ENST00000239690 ANP32BQ92688 251 aaKnown RBP12.71□□□□□ -0.37
NUDCD1-201ENST00000239690 VPS8Q8N3P4 1428 aa12.7□□□□□ -0.38
NUDCD1-201ENST00000239690 SOGA1O94964 1423 aa12.7□□□□□ -0.38
NUDCD1-201ENST00000239690 ARXQ96QS3 562 aa12.69□□□□□ -0.38
NUDCD1-201ENST00000239690 KCNH8Q96L42 1107 aa12.69□□□□□ -0.38
NUDCD1-201ENST00000239690 CCNB3Q8WWL7 1395 aa12.68□□□□□ -0.38
NUDCD1-201ENST00000239690 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.66□□□□□ -0.38
NUDCD1-201ENST00000239690 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.65□□□□□ -0.38
NUDCD1-201ENST00000239690 IPO9Q96P70 1041 aaKnown RBP12.64□□□□□ -0.39
NUDCD1-201ENST00000239690 SLC4A1APQ9BWU0 796 aaKnown RBP12.63□□□□□ -0.39
NUDCD1-201ENST00000239690 DHX57Q6P158 1386 aaKnown RBP12.62□□□□□ -0.39
NUDCD1-201ENST00000239690 BECN1Q14457 450 aa12.62□□□□□ -0.39
NUDCD1-201ENST00000239690 CHIC2Q9UKJ5 165 aa12.6□□□□□ -0.39
NUDCD1-201ENST00000239690 HSP90AA1P07900 732 aaKnown RBP12.59□□□□□ -0.39
NUDCD1-201ENST00000239690 NAP1L5Q96NT1 182 aaPredicted RBP12.59□□□□□ -0.39
NUDCD1-201ENST00000239690 CCDC88BA6NC98 1476 aa12.59□□□□□ -0.39
NUDCD1-201ENST00000239690 PRKCSHP14314 528 aaPredicted RBP12.58□□□□□ -0.39
NUDCD1-201ENST00000239690 MTUS2Q5JR59 1369 aa12.57□□□□□ -0.4
NUDCD1-201ENST00000239690 TRIM44Q96DX7 344 aaPredicted RBP12.57□□□□□ -0.4
NUDCD1-201ENST00000239690 CECR2Q9BXF3 1484 aa12.57□□□□□ -0.4
NUDCD1-201ENST00000239690 SETD5Q9C0A6 1442 aa12.57□□□□□ -0.4
NUDCD1-201ENST00000239690 SENP3-EIF4A1A0A087X0R7 540 aa12.56□□□□□ -0.4
NUDCD1-201ENST00000239690 USP35Q9P2H5 1018 aa12.56□□□□□ -0.4
NUDCD1-201ENST00000239690 RAB3GAP2Q9H2M9 1393 aa12.55□□□□□ -0.4
NUDCD1-201ENST00000239690 KANK4Q5T7N3 995 aaPredicted RBP12.54□□□□□ -0.4
NUDCD1-201ENST00000239690 PPP1R15AO75807 674 aaPredicted RBP12.54□□□□□ -0.4
NUDCD1-201ENST00000239690 TCERG1O14776 1098 aaKnown RBP12.53□□□□□ -0.4
NUDCD1-201ENST00000239690 ABCC8Q09428 1581 aa12.53□□□□□ -0.4
NUDCD1-201ENST00000239690 RRP7BPQ9NSQ0 103 aa12.51□□□□□ -0.41
NUDCD1-201ENST00000239690 WDR43Q15061 677 aaKnown RBP eCLIP12.51□□□□□ -0.41
NUDCD1-201ENST00000239690 L1TD1Q5T7N2 865 aaKnown RBP12.5□□□□□ -0.41
NUDCD1-201ENST00000239690 ARID3CA6NKF2 412 aa12.49□□□□□ -0.41
NUDCD1-201ENST00000239690 BAZ1AQ9NRL2 1556 aaPredicted RBP12.49□□□□□ -0.41
NUDCD1-201ENST00000239690 HSPA5P11021 654 aaKnown RBP12.49□□□□□ -0.41
NUDCD1-201ENST00000239690 MROH2BQ7Z745 1585 aa12.48□□□□□ -0.41
NUDCD1-201ENST00000239690 ANO8Q9HCE9 1232 aaPredicted RBP12.48□□□□□ -0.41
NUDCD1-201ENST00000239690 RGS3P49796 1198 aa12.46□□□□□ -0.41
NUDCD1-201ENST00000239690 NUDCQ9Y266 331 aa12.46□□□□□ -0.42
NUDCD1-201ENST00000239690 RSPH6AQ9H0K4 717 aa12.45□□□□□ -0.42
NUDCD1-201ENST00000239690 KIF27Q86VH2 1401 aa12.45□□□□□ -0.42
NUDCD1-201ENST00000239690 ZNF777Q9ULD5 760 aaPredicted RBP12.45□□□□□ -0.42
NUDCD1-201ENST00000239690 PNNQ9H307 717 aaKnown RBP12.44□□□□□ -0.42
NUDCD1-201ENST00000239690 GSE1Q14687 1217 aa12.43□□□□□ -0.42
NUDCD1-201ENST00000239690 KDM2AQ9Y2K7 1162 aa12.42□□□□□ -0.42
NUDCD1-201ENST00000239690 MSH5O43196 834 aa12.41□□□□□ -0.42
NUDCD1-201ENST00000239690 TNNT2P45379 298 aaPredicted RBP12.41□□□□□ -0.42
NUDCD1-201ENST00000239690 GOLGA6L22H0YM25 854 aa12.4□□□□□ -0.42
NUDCD1-201ENST00000239690 ZBED9Q6R2W3 1325 aa12.4□□□□□ -0.42
NUDCD1-201ENST00000239690 RCAN3Q9UKA8 241 aa12.4□□□□□ -0.42
NUDCD1-201ENST00000239690 FHAD1B1AJZ9 1412 aa12.39□□□□□ -0.43
NUDCD1-201ENST00000239690 PDE4AP27815 886 aa12.38□□□□□ -0.43
NUDCD1-201ENST00000239690 NACADO15069 1562 aa12.36□□□□□ -0.43
NUDCD1-201ENST00000239690 CARD11Q9BXL7 1154 aa12.36□□□□□ -0.43
NUDCD1-201ENST00000239690 IL27Q8NEV9 243 aa12.36□□□□□ -0.43
NUDCD1-201ENST00000239690 BAZ1BQ9UIG0 1483 aaKnown RBP12.36□□□□□ -0.43
NUDCD1-201ENST00000239690 RUSC2Q8N2Y8 1516 aa12.36□□□□□ -0.43
NUDCD1-201ENST00000239690 PAK3O75914 559 aaPredicted RBP12.34□□□□□ -0.43
NUDCD1-201ENST00000239690 WIZO95785 1651 aa12.34□□□□□ -0.43
NUDCD1-201ENST00000239690 PRKRIP1Q9H875 184 aaPredicted RBP12.34□□□□□ -0.43
NUDCD1-201ENST00000239690 HSP90AA2PQ14568 343 aaPredicted RBP12.33□□□□□ -0.44
NUDCD1-201ENST00000239690 VSIG10Q8N0Z9 540 aa12.33□□□□□ -0.44
NUDCD1-201ENST00000239690 ARHGAP35Q9NRY4 1499 aa12.32□□□□□ -0.44
NUDCD1-201ENST00000239690 RAPGEF2Q9Y4G8 1499 aa12.32□□□□□ -0.44
NUDCD1-201ENST00000239690 MS4A1P11836 297 aa12.32□□□□□ -0.44
NUDCD1-201ENST00000239690 SLKQ9H2G2 1235 aaPredicted RBP12.31□□□□□ -0.44
NUDCD1-201ENST00000239690 ARID4BQ4LE39 1312 aaPredicted RBP12.3□□□□□ -0.44
NUDCD1-201ENST00000239690 GOLGA6L3A6NEY3 463 aa12.29□□□□□ -0.44
NUDCD1-201ENST00000239690 NCLP19338 710 aaKnown RBP12.29□□□□□ -0.44
NUDCD1-201ENST00000239690 PDE3BQ13370 1112 aa12.28□□□□□ -0.44
NUDCD1-201ENST00000239690 PTMAP06454 111 aaKnown RBP12.28□□□□□ -0.44
NUDCD1-201ENST00000239690 MSNP26038 577 aaKnown RBP12.28□□□□□ -0.44
NUDCD1-201ENST00000239690 DNTTIP2Q5QJE6 756 aaKnown RBP12.28□□□□□ -0.44
NUDCD1-201ENST00000239690 TOP2AP11388 1531 aaKnown RBP12.27□□□□□ -0.44
NUDCD1-201ENST00000239690 TSPY4P0CV99 314 aa12.27□□□□□ -0.45
NUDCD1-201ENST00000239690 TSPY10P0CW01 314 aa12.27□□□□□ -0.45
NUDCD1-201ENST00000239690 GZF1Q9H116 711 aaPredicted RBP12.27□□□□□ -0.45
NUDCD1-201ENST00000239690 SLC4A3P48751 1232 aa12.26□□□□□ -0.45
NUDCD1-201ENST00000239690 KNSTRNQ9Y448 316 aa12.26□□□□□ -0.45
NUDCD1-201ENST00000239690 EXOC6Q8TAG9 804 aa12.26□□□□□ -0.45
NUDCD1-201ENST00000239690 RALBP1Q15311 655 aa12.26□□□□□ -0.45
NUDCD1-201ENST00000239690 RRP1P56182 461 aaKnown RBP12.25□□□□□ -0.45
NUDCD1-201ENST00000239690 HSCBQ8IWL3 235 aa12.25□□□□□ -0.45
NUDCD1-201ENST00000239690 FMN1Q68DA7 1419 aa12.25□□□□□ -0.45
NUDCD1-201ENST00000239690 L3MBTL2Q969R5 705 aa12.25□□□□□ -0.45
NUDCD1-201ENST00000239690 BRPF3Q9ULD4 1205 aa12.25□□□□□ -0.45
NUDCD1-201ENST00000239690 NFKBIBQ15653 356 aa12.24□□□□□ -0.45
NUDCD1-201ENST00000239690 CC2D1BQ5T0F9 858 aaKnown RBP12.24□□□□□ -0.45
NUDCD1-201ENST00000239690 HSP90AB1P08238 724 aaKnown RBP12.24□□□□□ -0.45
NUDCD1-201ENST00000239690 SPRYD3Q8NCJ5 442 aa12.23□□□□□ -0.45
NUDCD1-201ENST00000239690 MYH16Q9H6N6 1097 aa12.23□□□□□ -0.45
NUDCD1-201ENST00000239690 FAM161AQ3B820 660 aa12.23□□□□□ -0.45
NUDCD1-201ENST00000239690 FRAT1Q92837 279 aaPredicted RBP12.23□□□□□ -0.45
NUDCD1-201ENST00000239690 CARMIL1Q5VZK9 1371 aa12.22□□□□□ -0.45
NUDCD1-201ENST00000239690 KTN1Q86UP2 1357 aaKnown RBP12.22□□□□□ -0.45
NUDCD1-201ENST00000239690 MPHOSPH9Q99550 1183 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms