RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 ZBTB7CA1YPR0 619 aa15.28■□□□□ 0.04
LAMA4-201ENST00000230538 CDK11BP21127 795 aaKnown RBP15.28■□□□□ 0.04
LAMA4-201ENST00000230538 EIF4G2P78344 907 aaKnown RBP eCLIP15.26■□□□□ 0.03
LAMA4-201ENST00000230538 SENP3Q9H4L4 574 aaPredicted RBP15.26■□□□□ 0.03
LAMA4-201ENST00000230538 CLIP1P30622 1438 aa15.25■□□□□ 0.03
LAMA4-201ENST00000230538 RRP7BPQ9NSQ0 103 aa15.25■□□□□ 0.03
LAMA4-201ENST00000230538 BECN1Q14457 450 aa15.24■□□□□ 0.03
LAMA4-201ENST00000230538 DDRGK1Q96HY6 314 aa15.24■□□□□ 0.03
LAMA4-201ENST00000230538 C14orf37Q86TY3 774 aa15.23■□□□□ 0.03
LAMA4-201ENST00000230538 CHMP7Q8WUX9 453 aaPredicted RBP15.23■□□□□ 0.03
LAMA4-201ENST00000230538 PLEKHG5O94827 1062 aa15.22■□□□□ 0.03
LAMA4-201ENST00000230538 NCLP19338 710 aaKnown RBP15.22■□□□□ 0.03
LAMA4-201ENST00000230538 SENP3-EIF4A1A0A087X0R7 540 aa15.22■□□□□ 0.03
LAMA4-201ENST00000230538 PPP1R15AO75807 674 aaPredicted RBP15.21■□□□□ 0.02
LAMA4-201ENST00000230538 TRIM44Q96DX7 344 aaPredicted RBP15.17■□□□□ 0.02
LAMA4-201ENST00000230538 GOLGA6L22H0YM25 854 aa15.16■□□□□ 0.02
LAMA4-201ENST00000230538 CCDC180Q9P1Z9 1646 aa15.16■□□□□ 0.02
LAMA4-201ENST00000230538 CEP162Q5TB80 1403 aa15.15■□□□□ 0.02
LAMA4-201ENST00000230538 GOLGA3Q08378 1498 aa15.15■□□□□ 0.02
LAMA4-201ENST00000230538 CFAP53Q96M91 514 aa15.14■□□□□ 0.01
LAMA4-201ENST00000230538 KCNH8Q96L42 1107 aa15.14■□□□□ 0.01
LAMA4-201ENST00000230538 ANP32EQ9BTT0 268 aa15.14■□□□□ 0.01
LAMA4-201ENST00000230538 RSF1Q96T23 1441 aaPredicted RBP15.13■□□□□ 0.01
LAMA4-201ENST00000230538 RGL3Q3MIN7 710 aa15.13■□□□□ 0.01
LAMA4-201ENST00000230538 CASC1Q6TDU7 716 aa15.11■□□□□ 0.01
LAMA4-201ENST00000230538 SUPT16HQ9Y5B9 1047 aaKnown RBP15.1■□□□□ 0.01
LAMA4-201ENST00000230538 KNSTRNQ9Y448 316 aa15.09■□□□□ 0.01
LAMA4-201ENST00000230538 PLEKHD1A6NEE1 506 aa15.09■□□□□ 0.01
LAMA4-201ENST00000230538 CDCA8Q53HL2 280 aa15.09■□□□□ 0.01
LAMA4-201ENST00000230538 FTSJ3Q8IY81 847 aaKnown RBP15.09■□□□□ 0.01
LAMA4-201ENST00000230538 ZRSR1Q15695 479 aaKnown RBP15.08■□□□□ 0.01
LAMA4-201ENST00000230538 PPM1GO15355 546 aaPredicted RBP15.08■□□□□ 0
LAMA4-201ENST00000230538 HAP1P54257 671 aaPredicted RBP15.07■□□□□ 0
LAMA4-201ENST00000230538 PTMAP06454 111 aaKnown RBP15.07■□□□□ 0
LAMA4-201ENST00000230538 TPRNQ4KMQ1 711 aa15.05■□□□□ -0
LAMA4-201ENST00000230538 LAS1LQ9Y4W2 734 aaKnown RBP15.04■□□□□ -0
LAMA4-201ENST00000230538 CARD11Q9BXL7 1154 aa15.03■□□□□ -0
LAMA4-201ENST00000230538 MAPK8IP3Q9UPT6 1336 aa15.02■□□□□ -0
LAMA4-201ENST00000230538 ARID4BQ4LE39 1312 aaPredicted RBP15.02□□□□□ -0.01
LAMA4-201ENST00000230538 NEUROD2Q15784 382 aa15.01□□□□□ -0.01
LAMA4-201ENST00000230538 DNTTIP2Q5QJE6 756 aaKnown RBP15□□□□□ -0.01
LAMA4-201ENST00000230538 CFDP1Q9UEE9 299 aaPredicted RBP15□□□□□ -0.01
LAMA4-201ENST00000230538 EEA1Q15075 1411 aa15□□□□□ -0.01
LAMA4-201ENST00000230538 SIN3AQ96ST3 1273 aa14.98□□□□□ -0.01
LAMA4-201ENST00000230538 NUDCQ9Y266 331 aa14.98□□□□□ -0.01
LAMA4-201ENST00000230538 TULP1O00294 542 aaPredicted RBP14.97□□□□□ -0.01
LAMA4-201ENST00000230538 RB1CC1Q8TDY2 1594 aa14.96□□□□□ -0.01
LAMA4-201ENST00000230538 TNNT2P45379 298 aaPredicted RBP14.96□□□□□ -0.01
LAMA4-201ENST00000230538 WRNQ14191 1432 aaPredicted RBP eCLIP14.96□□□□□ -0.01
LAMA4-201ENST00000230538 FRAT1Q92837 279 aaPredicted RBP14.95□□□□□ -0.02
LAMA4-201ENST00000230538 POGKQ9P215 609 aa14.95□□□□□ -0.02
LAMA4-201ENST00000230538 CC2D1BQ5T0F9 858 aaKnown RBP14.95□□□□□ -0.02
LAMA4-201ENST00000230538 RGS3P49796 1198 aa14.94□□□□□ -0.02
LAMA4-201ENST00000230538 PPP4R2Q9NY27 417 aa14.94□□□□□ -0.02
LAMA4-201ENST00000230538 CEP164Q9UPV0 1460 aa14.93□□□□□ -0.02
LAMA4-201ENST00000230538 TNIKQ9UKE5 1360 aa14.93□□□□□ -0.02
LAMA4-201ENST00000230538 RTN4Q9NQC3 1192 aaKnown RBP14.93□□□□□ -0.02
LAMA4-201ENST00000230538 TAOK2Q9UL54 1235 aa14.92□□□□□ -0.02
LAMA4-201ENST00000230538 LMOD2Q6P5Q4 547 aa14.92□□□□□ -0.02
LAMA4-201ENST00000230538 OS9Q13438 667 aaPredicted RBP14.92□□□□□ -0.02
LAMA4-201ENST00000230538 CHMP4BQ9H444 224 aaKnown RBP14.92□□□□□ -0.02
LAMA4-201ENST00000230538 HSP90AB1P08238 724 aaKnown RBP14.91□□□□□ -0.02
LAMA4-201ENST00000230538 NOP58Q9Y2X3 529 aaKnown RBP14.91□□□□□ -0.02
LAMA4-201ENST00000230538 PLCB2Q00722 1185 aa14.91□□□□□ -0.02
LAMA4-201ENST00000230538 BAZ1BQ9UIG0 1483 aaKnown RBP14.9□□□□□ -0.02
LAMA4-201ENST00000230538 ERICH6BQ5W0A0 696 aa14.9□□□□□ -0.02
LAMA4-201ENST00000230538 KIF27Q86VH2 1401 aa14.9□□□□□ -0.02
LAMA4-201ENST00000230538 NPHP1O15259 732 aa14.89□□□□□ -0.03
LAMA4-201ENST00000230538 NAP1L5Q96NT1 182 aaPredicted RBP14.89□□□□□ -0.03
LAMA4-201ENST00000230538 U2SURPO15042 1029 aaKnown RBP14.89□□□□□ -0.03
LAMA4-201ENST00000230538 MS4A1P11836 297 aa14.89□□□□□ -0.03
LAMA4-201ENST00000230538 FGD1P98174 961 aa14.88□□□□□ -0.03
LAMA4-201ENST00000230538 B4GALNT3Q6L9W6 998 aa14.88□□□□□ -0.03
LAMA4-201ENST00000230538 GOLGA6L6A8MZA4 724 aa14.88□□□□□ -0.03
LAMA4-201ENST00000230538 PNNQ9H307 717 aaKnown RBP14.87□□□□□ -0.03
LAMA4-201ENST00000230538 KCNJ4P48050 445 aa14.86□□□□□ -0.03
LAMA4-201ENST00000230538 NAP1L2Q9ULW6 460 aaPredicted RBP14.85□□□□□ -0.03
LAMA4-201ENST00000230538 TMF1P82094 1093 aa14.82□□□□□ -0.04
LAMA4-201ENST00000230538 GOLGA2Q08379 1002 aa14.82□□□□□ -0.04
LAMA4-201ENST00000230538 EIF4G1Q04637 1599 aaKnown RBP14.82□□□□□ -0.04
LAMA4-201ENST00000230538 HSCBQ8IWL3 235 aa14.81□□□□□ -0.04
LAMA4-201ENST00000230538 CCNB3Q8WWL7 1395 aa14.79□□□□□ -0.04
LAMA4-201ENST00000230538 NRDCO43847 1150 aa14.79□□□□□ -0.04
LAMA4-201ENST00000230538 DCAF11Q8TEB1 546 aa14.79□□□□□ -0.04
LAMA4-201ENST00000230538 GOLGA6L4A6NEF3 574 aa14.78□□□□□ -0.04
LAMA4-201ENST00000230538 KANK1Q14678 1352 aa14.78□□□□□ -0.04
LAMA4-201ENST00000230538 SPRYD3Q8NCJ5 442 aa14.78□□□□□ -0.04
LAMA4-201ENST00000230538 MCCP23508 829 aa14.76□□□□□ -0.05
LAMA4-201ENST00000230538 SRPK2P78362 688 aaKnown RBP14.75□□□□□ -0.05
LAMA4-201ENST00000230538 SOX12O15370 315 aa14.75□□□□□ -0.05
LAMA4-201ENST00000230538 ERCC6Q03468 1493 aa14.74□□□□□ -0.05
LAMA4-201ENST00000230538 MORC1Q86VD1 984 aa14.74□□□□□ -0.05
LAMA4-201ENST00000230538 NACADO15069 1562 aa14.73□□□□□ -0.05
LAMA4-201ENST00000230538 HSPA5P11021 654 aaKnown RBP14.73□□□□□ -0.05
LAMA4-201ENST00000230538 CHAF1AQ13111 956 aaPredicted RBP14.73□□□□□ -0.05
LAMA4-201ENST00000230538 FHAD1B1AJZ9 1412 aa14.72□□□□□ -0.05
LAMA4-201ENST00000230538 SOGA1O94964 1423 aa14.71□□□□□ -0.05
LAMA4-201ENST00000230538 HDGFP51858 240 aaKnown RBP14.71□□□□□ -0.05
LAMA4-201ENST00000230538 DEKP35659 375 aaKnown RBP14.7□□□□□ -0.06
LAMA4-201ENST00000230538 MSNP26038 577 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms