RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 ANP32EQ9BTT0 268 aa19.77■□□□□ 0.76
NDFIP2-201ENST00000218652 RRP7BPQ9NSQ0 103 aa19.77■□□□□ 0.75
NDFIP2-201ENST00000218652 BECN1Q14457 450 aa19.76■□□□□ 0.75
NDFIP2-201ENST00000218652 CCDC180Q9P1Z9 1646 aa19.76■□□□□ 0.75
NDFIP2-201ENST00000218652 MTUS2Q5JR59 1369 aa19.73■□□□□ 0.75
NDFIP2-201ENST00000218652 NPM1P06748 294 aaKnown RBP eCLIP19.73■□□□□ 0.75
NDFIP2-201ENST00000218652 DDRGK1Q96HY6 314 aa19.72■□□□□ 0.75
NDFIP2-201ENST00000218652 PLEKHG5O94827 1062 aa19.72■□□□□ 0.75
NDFIP2-201ENST00000218652 NCLP19338 710 aaKnown RBP19.71■□□□□ 0.75
NDFIP2-201ENST00000218652 RTN4Q9NQC3 1192 aaKnown RBP19.71■□□□□ 0.75
NDFIP2-201ENST00000218652 RGL3Q3MIN7 710 aa19.7■□□□□ 0.74
NDFIP2-201ENST00000218652 GOLGA6L22H0YM25 854 aa19.68■□□□□ 0.74
NDFIP2-201ENST00000218652 A0A0G2JS52 829 aa19.67■□□□□ 0.74
NDFIP2-201ENST00000218652 LAS1LQ9Y4W2 734 aaKnown RBP19.67■□□□□ 0.74
NDFIP2-201ENST00000218652 TPRNQ4KMQ1 711 aa19.65■□□□□ 0.74
NDFIP2-201ENST00000218652 NEUROD2Q15784 382 aa19.63■□□□□ 0.73
NDFIP2-201ENST00000218652 RGS3P49796 1198 aa19.62■□□□□ 0.73
NDFIP2-201ENST00000218652 PTMAP06454 111 aaKnown RBP19.62■□□□□ 0.73
NDFIP2-201ENST00000218652 CDK11BP21127 795 aaKnown RBP19.61■□□□□ 0.73
NDFIP2-201ENST00000218652 ERICH6BQ5W0A0 696 aa19.61■□□□□ 0.73
NDFIP2-201ENST00000218652 PPM1GO15355 546 aaPredicted RBP19.6■□□□□ 0.73
NDFIP2-201ENST00000218652 CLIP1P30622 1438 aa19.59■□□□□ 0.73
NDFIP2-201ENST00000218652 ZBTB7CA1YPR0 619 aa19.59■□□□□ 0.73
NDFIP2-201ENST00000218652 DNTTIP2Q5QJE6 756 aaKnown RBP19.59■□□□□ 0.73
NDFIP2-201ENST00000218652 C14orf37Q86TY3 774 aa19.56■□□□□ 0.72
NDFIP2-201ENST00000218652 B4GALNT3Q6L9W6 998 aa19.55■□□□□ 0.72
NDFIP2-201ENST00000218652 PPP4R2Q9NY27 417 aa19.54■□□□□ 0.72
NDFIP2-201ENST00000218652 KNSTRNQ9Y448 316 aa19.53■□□□□ 0.72
NDFIP2-201ENST00000218652 NAP1L5Q96NT1 182 aaPredicted RBP19.53■□□□□ 0.72
NDFIP2-201ENST00000218652 FTSJ3Q8IY81 847 aaKnown RBP19.52■□□□□ 0.72
NDFIP2-201ENST00000218652 TNNT2P45379 298 aaPredicted RBP19.52■□□□□ 0.72
NDFIP2-201ENST00000218652 SIN3AQ96ST3 1273 aa19.52■□□□□ 0.71
NDFIP2-201ENST00000218652 PLCB2Q00722 1185 aa19.51■□□□□ 0.71
NDFIP2-201ENST00000218652 KCNH8Q96L42 1107 aa19.5■□□□□ 0.71
NDFIP2-201ENST00000218652 FRAT1Q92837 279 aaPredicted RBP19.5■□□□□ 0.71
NDFIP2-201ENST00000218652 ZRSR1Q15695 479 aaKnown RBP19.5■□□□□ 0.71
NDFIP2-201ENST00000218652 CFAP53Q96M91 514 aa19.5■□□□□ 0.71
NDFIP2-201ENST00000218652 CARD11Q9BXL7 1154 aa19.49■□□□□ 0.71
NDFIP2-201ENST00000218652 NOP58Q9Y2X3 529 aaKnown RBP19.49■□□□□ 0.71
NDFIP2-201ENST00000218652 SCRIBQ14160 1630 aa19.47■□□□□ 0.71
NDFIP2-201ENST00000218652 PPP1R15AO75807 674 aaPredicted RBP19.47■□□□□ 0.71
NDFIP2-201ENST00000218652 CHMP7Q8WUX9 453 aaPredicted RBP19.46■□□□□ 0.71
NDFIP2-201ENST00000218652 TAOK2Q9UL54 1235 aa19.41■□□□□ 0.7
NDFIP2-201ENST00000218652 PLEKHD1A6NEE1 506 aa19.4■□□□□ 0.7
NDFIP2-201ENST00000218652 CDCA8Q53HL2 280 aa19.4■□□□□ 0.7
NDFIP2-201ENST00000218652 CASC1Q6TDU7 716 aa19.39■□□□□ 0.7
NDFIP2-201ENST00000218652 CEP162Q5TB80 1403 aa19.37■□□□□ 0.69
NDFIP2-201ENST00000218652 MAPK8IP3Q9UPT6 1336 aa19.36■□□□□ 0.69
NDFIP2-201ENST00000218652 CFDP1Q9UEE9 299 aaPredicted RBP19.36■□□□□ 0.69
NDFIP2-201ENST00000218652 CC2D1BQ5T0F9 858 aaKnown RBP19.36■□□□□ 0.69
NDFIP2-201ENST00000218652 ZCCHC6Q5VYS8 1495 aaKnown RBP19.34■□□□□ 0.69
NDFIP2-201ENST00000218652 TULP1O00294 542 aaPredicted RBP19.34■□□□□ 0.69
NDFIP2-201ENST00000218652 HSP90AB1P08238 724 aaKnown RBP19.34■□□□□ 0.69
NDFIP2-201ENST00000218652 DEKP35659 375 aaKnown RBP19.33■□□□□ 0.68
NDFIP2-201ENST00000218652 RBM19Q9Y4C8 960 aaKnown RBP19.32■□□□□ 0.68
NDFIP2-201ENST00000218652 NUDCQ9Y266 331 aa19.32■□□□□ 0.68
NDFIP2-201ENST00000218652 U2SURPO15042 1029 aaKnown RBP19.31■□□□□ 0.68
NDFIP2-201ENST00000218652 FGD1P98174 961 aa19.29■□□□□ 0.68
NDFIP2-201ENST00000218652 SPRYD3Q8NCJ5 442 aa19.29■□□□□ 0.68
NDFIP2-201ENST00000218652 RSF1Q96T23 1441 aaPredicted RBP19.28■□□□□ 0.68
NDFIP2-201ENST00000218652 ARID4BQ4LE39 1312 aaPredicted RBP19.28■□□□□ 0.68
NDFIP2-201ENST00000218652 KCNJ4P48050 445 aa19.26■□□□□ 0.67
NDFIP2-201ENST00000218652 LMOD2Q6P5Q4 547 aa19.25■□□□□ 0.67
NDFIP2-201ENST00000218652 HAP1P54257 671 aaPredicted RBP19.24■□□□□ 0.67
NDFIP2-201ENST00000218652 POGKQ9P215 609 aa19.23■□□□□ 0.67
NDFIP2-201ENST00000218652 NAP1L2Q9ULW6 460 aaPredicted RBP19.23■□□□□ 0.67
NDFIP2-201ENST00000218652 OS9Q13438 667 aaPredicted RBP19.23■□□□□ 0.67
NDFIP2-201ENST00000218652 GOLGA6L4A6NEF3 574 aa19.21■□□□□ 0.67
NDFIP2-201ENST00000218652 HSCBQ8IWL3 235 aa19.21■□□□□ 0.67
NDFIP2-201ENST00000218652 GOLGA3Q08378 1498 aa19.2■□□□□ 0.66
NDFIP2-201ENST00000218652 DCAF11Q8TEB1 546 aa19.19■□□□□ 0.66
NDFIP2-201ENST00000218652 MS4A1P11836 297 aa19.19■□□□□ 0.66
NDFIP2-201ENST00000218652 CHMP4BQ9H444 224 aaKnown RBP19.18■□□□□ 0.66
NDFIP2-201ENST00000218652 NRDCO43847 1150 aa19.17■□□□□ 0.66
NDFIP2-201ENST00000218652 TSHZ2Q9NRE2 1034 aa19.17■□□□□ 0.66
NDFIP2-201ENST00000218652 MSNP26038 577 aaKnown RBP19.16■□□□□ 0.66
NDFIP2-201ENST00000218652 SOX12O15370 315 aa19.14■□□□□ 0.66
NDFIP2-201ENST00000218652 EEA1Q15075 1411 aa19.14■□□□□ 0.65
NDFIP2-201ENST00000218652 SLKQ9H2G2 1235 aaPredicted RBP19.14■□□□□ 0.65
NDFIP2-201ENST00000218652 GZF1Q9H116 711 aaPredicted RBP19.13■□□□□ 0.65
NDFIP2-201ENST00000218652 TNIKQ9UKE5 1360 aa19.13■□□□□ 0.65
NDFIP2-201ENST00000218652 L1TD1Q5T7N2 865 aaKnown RBP19.12■□□□□ 0.65
NDFIP2-201ENST00000218652 APBB1O00213 710 aa19.12■□□□□ 0.65
NDFIP2-201ENST00000218652 TMF1P82094 1093 aa19.12■□□□□ 0.65
NDFIP2-201ENST00000218652 AMER1Q5JTC6 1135 aaPredicted RBP19.12■□□□□ 0.65
NDFIP2-201ENST00000218652 CHAF1AQ13111 956 aaPredicted RBP19.12■□□□□ 0.65
NDFIP2-201ENST00000218652 CCER2I3L3R5 266 aa19.11■□□□□ 0.65
NDFIP2-201ENST00000218652 GOLGA6L6A8MZA4 724 aa19.11■□□□□ 0.65
NDFIP2-201ENST00000218652 ARID3AQ99856 593 aa19.08■□□□□ 0.64
NDFIP2-201ENST00000218652 SAFB2Q14151 953 aaKnown RBP eCLIP19.08■□□□□ 0.64
NDFIP2-201ENST00000218652 HSPA5P11021 654 aaKnown RBP19.07■□□□□ 0.64
NDFIP2-201ENST00000218652 DRC7Q8IY82 874 aa19.06■□□□□ 0.64
NDFIP2-201ENST00000218652 WRNQ14191 1432 aaPredicted RBP eCLIP19.06■□□□□ 0.64
NDFIP2-201ENST00000218652 CCNB3Q8WWL7 1395 aa19.05■□□□□ 0.64
NDFIP2-201ENST00000218652 MORC1Q86VD1 984 aa19.05■□□□□ 0.64
NDFIP2-201ENST00000218652 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.04■□□□□ 0.64
NDFIP2-201ENST00000218652 NPHP1O15259 732 aa19.04■□□□□ 0.64
NDFIP2-201ENST00000218652 PNNQ9H307 717 aaKnown RBP19.03■□□□□ 0.64
NDFIP2-201ENST00000218652 RCAN3Q9UKA8 241 aa19.03■□□□□ 0.64
NDFIP2-201ENST00000218652 TIMELESSQ9UNS1 1208 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms