RNA–Protein interactions for RNA: ENST00000215473.7

PCDH11Y-201, Transcript of protocadherin 11 Y-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11Y, Length 4,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11Y-201ENST00000215473 CNGB1Q14028 1251 aaPredicted RBP3.93□□□□□ -1.78
PCDH11Y-201ENST00000215473 HOMEZQ8IX15 550 aa3.93□□□□□ -1.78
PCDH11Y-201ENST00000215473 ZEB1P37275 1124 aaPredicted RBP3.92□□□□□ -1.78
PCDH11Y-201ENST00000215473 TRIM52Q96A61 297 aa3.91□□□□□ -1.78
PCDH11Y-201ENST00000215473 AK7Q96M32 723 aa3.91□□□□□ -1.78
PCDH11Y-201ENST00000215473 ISY1Q9ULR0 285 aaKnown RBP3.91□□□□□ -1.78
PCDH11Y-201ENST00000215473 PAF1Q8N7H5 531 aa3.91□□□□□ -1.78
PCDH11Y-201ENST00000215473 DPF3Q92784 378 aa3.9□□□□□ -1.78
PCDH11Y-201ENST00000215473 NEUROD2Q15784 382 aa3.9□□□□□ -1.78
PCDH11Y-201ENST00000215473 ADRA2BP18089 450 aa3.9□□□□□ -1.79
PCDH11Y-201ENST00000215473 CHGAP10645 457 aaKnown RBP3.9□□□□□ -1.79
PCDH11Y-201ENST00000215473 CHMP4BP1P59074 171 aa3.89□□□□□ -1.79
PCDH11Y-201ENST00000215473 APLP2Q06481 763 aa3.89□□□□□ -1.79
PCDH11Y-201ENST00000215473 NPM2Q86SE8 214 aaKnown RBP3.89□□□□□ -1.79
PCDH11Y-201ENST00000215473 CCDC136Q96JN2 1154 aa3.89□□□□□ -1.79
PCDH11Y-201ENST00000215473 USP34Q70CQ2 3546 aa3.89□□□□□ -1.79
PCDH11Y-201ENST00000215473 NEFLP07196 543 aa3.89□□□□□ -1.79
PCDH11Y-201ENST00000215473 CACNB1Q02641 598 aaPredicted RBP3.89□□□□□ -1.79
PCDH11Y-201ENST00000215473 HMGB1P09429 215 aaKnown RBP3.88□□□□□ -1.79
PCDH11Y-201ENST00000215473 NEFHP12036 1026 aa3.88□□□□□ -1.79
PCDH11Y-201ENST00000215473 MIER1Q8N108 512 aa3.88□□□□□ -1.79
PCDH11Y-201ENST00000215473 MPHOSPH10O00566 681 aaKnown RBP3.88□□□□□ -1.79
PCDH11Y-201ENST00000215473 PSMD1Q99460 953 aa3.88□□□□□ -1.79
PCDH11Y-201ENST00000215473 PDCL3Q9H2J4 239 aa3.88□□□□□ -1.79
PCDH11Y-201ENST00000215473 KIF20AO95235 890 aa3.88□□□□□ -1.79
PCDH11Y-201ENST00000215473 NOP2P46087 812 aaKnown RBP3.88□□□□□ -1.79
PCDH11Y-201ENST00000215473 FBXW7Q969H0 707 aa3.88□□□□□ -1.79
PCDH11Y-201ENST00000215473 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.88□□□□□ -1.79
PCDH11Y-201ENST00000215473 TRHP20396 242 aaPredicted RBP3.88□□□□□ -1.79
PCDH11Y-201ENST00000215473 RBM25P49756 843 aaKnown RBP3.87□□□□□ -1.79
PCDH11Y-201ENST00000215473 G3V3G9 751 aa3.87□□□□□ -1.79
PCDH11Y-201ENST00000215473 DCAF8Q5TAQ9 597 aa3.87□□□□□ -1.79
PCDH11Y-201ENST00000215473 ZNF777Q9ULD5 760 aaPredicted RBP3.87□□□□□ -1.79
PCDH11Y-201ENST00000215473 ESF1Q9H501 851 aaKnown RBP3.87□□□□□ -1.79
PCDH11Y-201ENST00000215473 NOM1Q5C9Z4 860 aaKnown RBP3.86□□□□□ -1.79
PCDH11Y-201ENST00000215473 CCAR1Q8IX12 1150 aaKnown RBP3.86□□□□□ -1.79
PCDH11Y-201ENST00000215473 CWC22Q9HCG8 908 aaKnown RBP3.86□□□□□ -1.79
PCDH11Y-201ENST00000215473 GOLGA6L4A6NEF3 574 aa3.85□□□□□ -1.79
PCDH11Y-201ENST00000215473 TTC16Q8NEE8 873 aa3.85□□□□□ -1.79
PCDH11Y-201ENST00000215473 TMC1Q8TDI8 760 aa3.85□□□□□ -1.79
PCDH11Y-201ENST00000215473 GOLGA2Q08379 1002 aa3.85□□□□□ -1.79
PCDH11Y-201ENST00000215473 HMGN5P82970 282 aaKnown RBP3.84□□□□□ -1.79
PCDH11Y-201ENST00000215473 BCCIPQ9P287 314 aaKnown RBP eCLIP3.84□□□□□ -1.79
PCDH11Y-201ENST00000215473 FYB1O15117 783 aa3.84□□□□□ -1.79
PCDH11Y-201ENST00000215473 NPHP1O15259 732 aa3.84□□□□□ -1.79
PCDH11Y-201ENST00000215473 CCDC85CA6NKD9 419 aa3.83□□□□□ -1.8
PCDH11Y-201ENST00000215473 NF2P35240 595 aa3.83□□□□□ -1.8
PCDH11Y-201ENST00000215473 RBM19Q9Y4C8 960 aaKnown RBP3.82□□□□□ -1.8
PCDH11Y-201ENST00000215473 RAD21O60216 631 aa3.82□□□□□ -1.8
PCDH11Y-201ENST00000215473 ECM2O94769 699 aaPredicted RBP3.82□□□□□ -1.8
PCDH11Y-201ENST00000215473 RNF40O75150 1001 aa3.82□□□□□ -1.8
PCDH11Y-201ENST00000215473 YY1P25490 414 aa3.82□□□□□ -1.8
PCDH11Y-201ENST00000215473 DDX46Q7L014 1031 aaKnown RBP3.82□□□□□ -1.8
PCDH11Y-201ENST00000215473 PDIA4P13667 645 aaKnown RBP3.81□□□□□ -1.8
PCDH11Y-201ENST00000215473 ERICH6BQ5W0A0 696 aa3.81□□□□□ -1.8
PCDH11Y-201ENST00000215473 KIAA1211Q6ZU35 1233 aa3.81□□□□□ -1.8
PCDH11Y-201ENST00000215473 CCDC97Q96F63 343 aaPredicted RBP3.81□□□□□ -1.8
PCDH11Y-201ENST00000215473 ZRSR2Q15696 482 aaKnown RBP3.81□□□□□ -1.8
PCDH11Y-201ENST00000215473 PRKG1Q13976 671 aa3.81□□□□□ -1.8
PCDH11Y-201ENST00000215473 RFX1P22670 979 aa3.8□□□□□ -1.8
PCDH11Y-201ENST00000215473 SRPK2P78362 688 aaKnown RBP3.8□□□□□ -1.8
PCDH11Y-201ENST00000215473 BICDL1Q6ZP65 573 aa3.8□□□□□ -1.8
PCDH11Y-201ENST00000215473 PDCL2Q8N4E4 241 aa3.8□□□□□ -1.8
PCDH11Y-201ENST00000215473 TCERG1O14776 1098 aaKnown RBP3.8□□□□□ -1.8
PCDH11Y-201ENST00000215473 CHMP3Q9Y3E7 222 aa3.8□□□□□ -1.8
PCDH11Y-201ENST00000215473 MATR3P43243 847 aaKnown RBP eCLIP3.8□□□□□ -1.8
PCDH11Y-201ENST00000215473 WDR78Q5VTH9 848 aa3.8□□□□□ -1.8
PCDH11Y-201ENST00000215473 CLEC11AQ9Y240 323 aa3.8□□□□□ -1.8
PCDH11Y-201ENST00000215473 PATL2C9JE40 543 aaKnown RBP3.79□□□□□ -1.8
PCDH11Y-201ENST00000215473 GRM1Q13255 1194 aa3.79□□□□□ -1.8
PCDH11Y-201ENST00000215473 CCDC9Q9Y3X0 531 aaKnown RBP3.79□□□□□ -1.8
PCDH11Y-201ENST00000215473 BIN2Q9UBW5 565 aaPredicted RBP3.78□□□□□ -1.8
PCDH11Y-201ENST00000215473 CCDC70Q6NSX1 233 aa3.78□□□□□ -1.8
PCDH11Y-201ENST00000215473 UIMC1Q96RL1 719 aa3.78□□□□□ -1.8
PCDH11Y-201ENST00000215473 TSPYL1Q9H0U9 437 aa3.78□□□□□ -1.8
PCDH11Y-201ENST00000215473 WWC3Q9ULE0 1092 aa3.78□□□□□ -1.8
PCDH11Y-201ENST00000215473 POLEQ07864 2286 aa3.78□□□□□ -1.8
PCDH11Y-201ENST00000215473 CT47B1P0C2W7 299 aaPredicted RBP3.78□□□□□ -1.8
PCDH11Y-201ENST00000215473 SPOUT1Q5T280 376 aaKnown RBP3.78□□□□□ -1.8
PCDH11Y-201ENST00000215473 SHQ1Q6PI26 577 aaKnown RBP3.78□□□□□ -1.8
PCDH11Y-201ENST00000215473 ZNF622Q969S3 477 aaKnown RBP eCLIP3.78□□□□□ -1.8
PCDH11Y-201ENST00000215473 BRWD1Q9NSI6 2320 aa3.77□□□□□ -1.81
PCDH11Y-201ENST00000215473 TNNT3P45378 269 aaPredicted RBP3.77□□□□□ -1.81
PCDH11Y-201ENST00000215473 ZFYVE1Q9HBF4 777 aa3.77□□□□□ -1.81
PCDH11Y-201ENST00000215473 ANO8Q9HCE9 1232 aaPredicted RBP3.77□□□□□ -1.81
PCDH11Y-201ENST00000215473 GOLGA6L9A6NEM1 432 aa3.77□□□□□ -1.81
PCDH11Y-201ENST00000215473 MKL2Q9ULH7 1088 aa3.77□□□□□ -1.81
PCDH11Y-201ENST00000215473 PSME1Q06323 249 aa3.77□□□□□ -1.81
PCDH11Y-201ENST00000215473 TSPY2A6NKD2 308 aa3.76□□□□□ -1.81
PCDH11Y-201ENST00000215473 TSPY3P0CV98 308 aa3.76□□□□□ -1.81
PCDH11Y-201ENST00000215473 TSPY8P0CW00 308 aa3.76□□□□□ -1.81
PCDH11Y-201ENST00000215473 TSPY1Q01534 308 aa3.76□□□□□ -1.81
PCDH11Y-201ENST00000215473 ZBTB47Q9UFB7 747 aaPredicted RBP3.76□□□□□ -1.81
PCDH11Y-201ENST00000215473 TTLL12Q14166 644 aaPredicted RBP3.76□□□□□ -1.81
PCDH11Y-201ENST00000215473 SSR1P43307 286 aaKnown RBP3.76□□□□□ -1.81
PCDH11Y-201ENST00000215473 GSE1Q14687 1217 aa3.76□□□□□ -1.81
PCDH11Y-201ENST00000215473 CCDC157Q569K6 752 aa3.76□□□□□ -1.81
PCDH11Y-201ENST00000215473 CT47A1Q5JQC4 288 aaPredicted RBP3.76□□□□□ -1.81
PCDH11Y-201ENST00000215473 GOLGA6L6A8MZA4 724 aa3.75□□□□□ -1.81
PCDH11Y-201ENST00000215473 PHF14O94880 888 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms