RNA–Protein interactions for RNA: ENST00000204005.13

LTBP4-201, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP4, Length 5,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-201ENST00000204005 NEFMP07197 916 aa26.05■■□□□ 1.76
LTBP4-201ENST00000204005 KCNH8Q96L42 1107 aa26.05■■□□□ 1.76
LTBP4-201ENST00000204005 FHAD1B1AJZ9 1412 aa26.04■■□□□ 1.76
LTBP4-201ENST00000204005 CFDP1Q9UEE9 299 aaPredicted RBP26.02■■□□□ 1.76
LTBP4-201ENST00000204005 PDS5BQ9NTI5 1447 aa26.01■■□□□ 1.75
LTBP4-201ENST00000204005 ATAD2BQ9ULI0 1458 aa25.97■■□□□ 1.75
LTBP4-201ENST00000204005 KDM2AQ9Y2K7 1162 aa25.95■■□□□ 1.74
LTBP4-201ENST00000204005 SMARCA4P51532 1647 aa25.94■■□□□ 1.74
LTBP4-201ENST00000204005 HNRNPUQ00839 825 aaKnown RBP eCLIP25.92■■□□□ 1.74
LTBP4-201ENST00000204005 CANXP27824 592 aaKnown RBP25.92■■□□□ 1.74
LTBP4-201ENST00000204005 CADPSQ9ULU8 1353 aa25.91■■□□□ 1.74
LTBP4-201ENST00000204005 VPS8Q8N3P4 1428 aa25.88■■□□□ 1.73
LTBP4-201ENST00000204005 EIF4G2P78344 907 aaKnown RBP eCLIP25.88■■□□□ 1.731e-6■■■■□ 19.5
LTBP4-201ENST00000204005 EIF4G1Q04637 1599 aaKnown RBP25.86■■□□□ 1.73
LTBP4-201ENST00000204005 CCNB3Q8WWL7 1395 aa25.85■■□□□ 1.73
LTBP4-201ENST00000204005 ZBTB47Q9UFB7 747 aaPredicted RBP25.84■■□□□ 1.73
LTBP4-201ENST00000204005 FAM9BQ8IZU0 186 aa25.83■■□□□ 1.73
LTBP4-201ENST00000204005 TDRD9Q8NDG6 1382 aaKnown RBP25.79■■□□□ 1.72
LTBP4-201ENST00000204005 TMC1Q8TDI8 760 aa25.78■■□□□ 1.72
LTBP4-201ENST00000204005 HIRIP3Q9BW71 556 aaPredicted RBP25.78■■□□□ 1.72
LTBP4-201ENST00000204005 ANP32AP39687 249 aaKnown RBP25.76■■□□□ 1.71
LTBP4-201ENST00000204005 PLPPR3Q6T4P5 718 aa25.76■■□□□ 1.71
LTBP4-201ENST00000204005 SLC24A1O60721 1099 aa25.75■■□□□ 1.71
LTBP4-201ENST00000204005 MRS2Q9HD23 443 aa25.71■■□□□ 1.71
LTBP4-201ENST00000204005 RGL3Q3MIN7 710 aa25.67■■□□□ 1.7
LTBP4-201ENST00000204005 FMN1Q68DA7 1419 aa25.64■■□□□ 1.7
LTBP4-201ENST00000204005 CARMIL2Q6F5E8 1435 aa25.64■■□□□ 1.69
LTBP4-201ENST00000204005 KANK4Q5T7N3 995 aaPredicted RBP25.63■■□□□ 1.69
LTBP4-201ENST00000204005 RAPGEF2Q9Y4G8 1499 aa25.62■■□□□ 1.69
LTBP4-201ENST00000204005 SIN3AQ96ST3 1273 aa25.61■■□□□ 1.69
LTBP4-201ENST00000204005 ARHGAP35Q9NRY4 1499 aa25.61■■□□□ 1.69
LTBP4-201ENST00000204005 WDR43Q15061 677 aaKnown RBP eCLIP25.6■■□□□ 1.696e-7■■□□□ 12.2
LTBP4-201ENST00000204005 SALL2Q9Y467 1007 aaPredicted RBP25.59■■□□□ 1.69
LTBP4-201ENST00000204005 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
LTBP4-201ENST00000204005 NPM2Q86SE8 214 aaKnown RBP25.53■■□□□ 1.68
LTBP4-201ENST00000204005 TIMELESSQ9UNS1 1208 aa25.52■■□□□ 1.68
LTBP4-201ENST00000204005 SETD5Q9C0A6 1442 aa25.52■■□□□ 1.68
LTBP4-201ENST00000204005 CARD11Q9BXL7 1154 aa25.52■■□□□ 1.68
LTBP4-201ENST00000204005 PPP1R15AO75807 674 aaPredicted RBP25.52■■□□□ 1.68
LTBP4-201ENST00000204005 BCL11AQ9H165 835 aa25.49■■□□□ 1.67
LTBP4-201ENST00000204005 CDCA8Q53HL2 280 aa25.48■■□□□ 1.67
LTBP4-201ENST00000204005 CCDC136Q96JN2 1154 aa25.48■■□□□ 1.67
LTBP4-201ENST00000204005 IRX6P78412 446 aaPredicted RBP25.45■■□□□ 1.67
LTBP4-201ENST00000204005 RUSC2Q8N2Y8 1516 aa25.44■■□□□ 1.66
LTBP4-201ENST00000204005 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.43■■□□□ 1.66
LTBP4-201ENST00000204005 NCAPD3P42695 1498 aa25.43■■□□□ 1.66
LTBP4-201ENST00000204005 FHOD3Q2V2M9 1422 aa25.42■■□□□ 1.66
LTBP4-201ENST00000204005 ARID4BQ4LE39 1312 aaPredicted RBP25.39■■□□□ 1.66
LTBP4-201ENST00000204005 SENP3Q9H4L4 574 aaPredicted RBP25.37■■□□□ 1.65
LTBP4-201ENST00000204005 SUPT16HQ9Y5B9 1047 aaKnown RBP25.36■■□□□ 1.65
LTBP4-201ENST00000204005 KNSTRNQ9Y448 316 aa25.34■■□□□ 1.65
LTBP4-201ENST00000204005 KANK1Q14678 1352 aa25.34■■□□□ 1.65
LTBP4-201ENST00000204005 RAB3GAP2Q9H2M9 1393 aa25.32■■□□□ 1.64
LTBP4-201ENST00000204005 JPH4Q96JJ6 628 aa25.3■■□□□ 1.64
LTBP4-201ENST00000204005 DCAF11Q8TEB1 546 aa25.29■■□□□ 1.64
LTBP4-201ENST00000204005 EFCAB2Q5VUJ9 269 aa25.29■■□□□ 1.64
LTBP4-201ENST00000204005 FGD5Q6ZNL6 1462 aa25.26■■□□□ 1.63
LTBP4-201ENST00000204005 PKD2Q13563 968 aa25.26■■□□□ 1.63
LTBP4-201ENST00000204005 ANKRD30AQ9BXX3 1397 aa25.24■■□□□ 1.63
LTBP4-201ENST00000204005 CFAP53Q96M91 514 aa25.24■■□□□ 1.63
LTBP4-201ENST00000204005 IGF1RP08069 1367 aa25.23■■□□□ 1.63
LTBP4-201ENST00000204005 CCDC18Q5T9S5 1454 aa25.23■■□□□ 1.63
LTBP4-201ENST00000204005 ANP32EQ9BTT0 268 aa25.23■■□□□ 1.63
LTBP4-201ENST00000204005 MPHOSPH9Q99550 1183 aa25.21■■□□□ 1.63
LTBP4-201ENST00000204005 NBR1Q14596 966 aa25.2■■□□□ 1.62
LTBP4-201ENST00000204005 UPF2Q9HAU5 1272 aaKnown RBP25.18■■□□□ 1.62
LTBP4-201ENST00000204005 CCER2I3L3R5 266 aa25.17■■□□□ 1.62
LTBP4-201ENST00000204005 POGKQ9P215 609 aa25.17■■□□□ 1.62
LTBP4-201ENST00000204005 GAPVD1Q14C86 1478 aa25.16■■□□□ 1.62
LTBP4-201ENST00000204005 NUP155O75694 1391 aa25.16■■□□□ 1.62
LTBP4-201ENST00000204005 TMF1P82094 1093 aa25.15■■□□□ 1.62
LTBP4-201ENST00000204005 FOXD1Q16676 465 aa25.15■■□□□ 1.62
LTBP4-201ENST00000204005 RSPH4AQ5TD94 716 aa25.15■■□□□ 1.62
LTBP4-201ENST00000204005 C14orf37Q86TY3 774 aa25.14■■□□□ 1.62
LTBP4-201ENST00000204005 RAD54L2Q9Y4B4 1467 aa25.12■■□□□ 1.61
LTBP4-201ENST00000204005 GGT6Q6P531 493 aa25.11■■□□□ 1.61
LTBP4-201ENST00000204005 HSPA5P11021 654 aaKnown RBP25.1■■□□□ 1.61
LTBP4-201ENST00000204005 PPP4R2Q9NY27 417 aa25.1■■□□□ 1.61
LTBP4-201ENST00000204005 HNRNPMP52272 730 aaKnown RBP eCLIP25.07■■□□□ 1.6
LTBP4-201ENST00000204005 CFTRP13569 1480 aa25.06■■□□□ 1.6
LTBP4-201ENST00000204005 MLECQ14165 292 aa25.03■■□□□ 1.6
LTBP4-201ENST00000204005 HDGFP51858 240 aaKnown RBP25.03■■□□□ 1.6
LTBP4-201ENST00000204005 PTPRGP23470 1445 aa25.02■■□□□ 1.6
LTBP4-201ENST00000204005 CC2D1BQ5T0F9 858 aaKnown RBP25.02■■□□□ 1.6
LTBP4-201ENST00000204005 NUDCQ9Y266 331 aa25.02■■□□□ 1.6
LTBP4-201ENST00000204005 PPM1GO15355 546 aaPredicted RBP25.02■■□□□ 1.6
LTBP4-201ENST00000204005 ZBTB7CA1YPR0 619 aa25.01■■□□□ 1.59
LTBP4-201ENST00000204005 SENP3-EIF4A1A0A087X0R7 540 aa25■■□□□ 1.59
LTBP4-201ENST00000204005 HSP90AA1P07900 732 aaKnown RBP25■■□□□ 1.59
LTBP4-201ENST00000204005 SPAG9O60271 1321 aaKnown RBP24.99■■□□□ 1.59
LTBP4-201ENST00000204005 TRHP20396 242 aaPredicted RBP24.98■■□□□ 1.59
LTBP4-201ENST00000204005 MYH16Q9H6N6 1097 aa24.98■■□□□ 1.59
LTBP4-201ENST00000204005 KIF3BO15066 747 aa24.96■■□□□ 1.59
LTBP4-201ENST00000204005 HMGXB3Q12766 1538 aa24.96■■□□□ 1.59
LTBP4-201ENST00000204005 DHX57Q6P158 1386 aaKnown RBP24.96■■□□□ 1.59
LTBP4-201ENST00000204005 PLEKHG5O94827 1062 aa24.95■■□□□ 1.58
LTBP4-201ENST00000204005 MAPK8IP3Q9UPT6 1336 aa24.95■■□□□ 1.58
LTBP4-201ENST00000204005 L3MBTL2Q969R5 705 aa24.94■■□□□ 1.58
LTBP4-201ENST00000204005 TNNT2P45379 298 aaPredicted RBP24.92■■□□□ 1.58
LTBP4-201ENST00000204005 ROCK2O75116 1388 aaKnown RBP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms