RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 MRS2Q9HD23 443 aa16.62■□□□□ 0.25
LMCD1-201ENST00000157600 ARID3CA6NKF2 412 aa16.6■□□□□ 0.25
LMCD1-201ENST00000157600 FHAD1B1AJZ9 1412 aa16.6■□□□□ 0.25
LMCD1-201ENST00000157600 WRNQ14191 1432 aaPredicted RBP eCLIP16.6■□□□□ 0.25
LMCD1-201ENST00000157600 CHGAP10645 457 aaKnown RBP16.57■□□□□ 0.24
LMCD1-201ENST00000157600 TNIKQ9UKE5 1360 aa16.57■□□□□ 0.24
LMCD1-201ENST00000157600 BCL11AQ9H165 835 aa16.55■□□□□ 0.24
LMCD1-201ENST00000157600 CHMP7Q8WUX9 453 aaPredicted RBP16.55■□□□□ 0.24
LMCD1-201ENST00000157600 GOLGA6L22H0YM25 854 aa16.53■□□□□ 0.24
LMCD1-201ENST00000157600 CHMP4BQ9H444 224 aaKnown RBP16.52■□□□□ 0.24
LMCD1-201ENST00000157600 CFAP53Q96M91 514 aa16.5■□□□□ 0.23
LMCD1-201ENST00000157600 CASC1Q6TDU7 716 aa16.47■□□□□ 0.23
LMCD1-201ENST00000157600 PLEKHD1A6NEE1 506 aa16.47■□□□□ 0.23
LMCD1-201ENST00000157600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.47■□□□□ 0.23
LMCD1-201ENST00000157600 CHIC2Q9UKJ5 165 aa16.47■□□□□ 0.23
LMCD1-201ENST00000157600 TIMELESSQ9UNS1 1208 aa16.47■□□□□ 0.23
LMCD1-201ENST00000157600 NCLP19338 710 aaKnown RBP16.46■□□□□ 0.23
LMCD1-201ENST00000157600 CDK11BP21127 795 aaKnown RBP16.43■□□□□ 0.22
LMCD1-201ENST00000157600 MS4A1P11836 297 aa16.43■□□□□ 0.22
LMCD1-201ENST00000157600 KNSTRNQ9Y448 316 aa16.43■□□□□ 0.22
LMCD1-201ENST00000157600 TRIM44Q96DX7 344 aaPredicted RBP16.41■□□□□ 0.22
LMCD1-201ENST00000157600 SMARCA2P51531 1590 aa16.41■□□□□ 0.22
LMCD1-201ENST00000157600 PNNQ9H307 717 aaKnown RBP16.4■□□□□ 0.22
LMCD1-201ENST00000157600 KDM2AQ9Y2K7 1162 aa16.39■□□□□ 0.21
LMCD1-201ENST00000157600 PPM1GO15355 546 aaPredicted RBP16.37■□□□□ 0.21
LMCD1-201ENST00000157600 MIER1Q8N108 512 aa16.37■□□□□ 0.21
LMCD1-201ENST00000157600 CFAP44Q96MT7 982 aa16.36■□□□□ 0.21
LMCD1-201ENST00000157600 CFDP1Q9UEE9 299 aaPredicted RBP16.35■□□□□ 0.21
LMCD1-201ENST00000157600 PPP1R15AO75807 674 aaPredicted RBP16.34■□□□□ 0.21
LMCD1-201ENST00000157600 NBR1Q14596 966 aa16.34■□□□□ 0.21
LMCD1-201ENST00000157600 CCNB3Q8WWL7 1395 aa16.33■□□□□ 0.2
LMCD1-201ENST00000157600 SALL2Q9Y467 1007 aaPredicted RBP16.33■□□□□ 0.2
LMCD1-201ENST00000157600 FTSJ3Q8IY81 847 aaKnown RBP16.33■□□□□ 0.2
LMCD1-201ENST00000157600 ZRSR1Q15695 479 aaKnown RBP16.32■□□□□ 0.2
LMCD1-201ENST00000157600 NUDCQ9Y266 331 aa16.31■□□□□ 0.2
LMCD1-201ENST00000157600 MYO15BQ96JP2 1530 aa16.31■□□□□ 0.2
LMCD1-201ENST00000157600 TNNT2P45379 298 aaPredicted RBP16.3■□□□□ 0.2
LMCD1-201ENST00000157600 RRP7BPQ9NSQ0 103 aa16.3■□□□□ 0.2
LMCD1-201ENST00000157600 KANK1Q14678 1352 aa16.3■□□□□ 0.2
LMCD1-201ENST00000157600 ERICH6BQ5W0A0 696 aa16.29■□□□□ 0.2
LMCD1-201ENST00000157600 HAP1P54257 671 aaPredicted RBP16.29■□□□□ 0.2
LMCD1-201ENST00000157600 ARHGAP35Q9NRY4 1499 aa16.29■□□□□ 0.2
LMCD1-201ENST00000157600 ARID4BQ4LE39 1312 aaPredicted RBP16.29■□□□□ 0.2
LMCD1-201ENST00000157600 CARD11Q9BXL7 1154 aa16.27■□□□□ 0.19
LMCD1-201ENST00000157600 PPP4R2Q9NY27 417 aa16.26■□□□□ 0.19
LMCD1-201ENST00000157600 ERCC6Q03468 1493 aa16.26■□□□□ 0.19
LMCD1-201ENST00000157600 MAPK8IP3Q9UPT6 1336 aa16.26■□□□□ 0.19
LMCD1-201ENST00000157600 SCAF1Q9H7N4 1312 aaKnown RBP16.24■□□□□ 0.19
LMCD1-201ENST00000157600 VPS8Q8N3P4 1428 aa16.24■□□□□ 0.19
LMCD1-201ENST00000157600 GOLGA6L6A8MZA4 724 aa16.22■□□□□ 0.19
LMCD1-201ENST00000157600 CCER2I3L3R5 266 aa16.22■□□□□ 0.19
LMCD1-201ENST00000157600 FMN1Q68DA7 1419 aa16.22■□□□□ 0.19
LMCD1-201ENST00000157600 NRDCO43847 1150 aa16.21■□□□□ 0.19
LMCD1-201ENST00000157600 HDGFP51858 240 aaKnown RBP16.19■□□□□ 0.18
LMCD1-201ENST00000157600 SETD5Q9C0A6 1442 aa16.18■□□□□ 0.18
LMCD1-201ENST00000157600 PTMSP20962 102 aa16.17■□□□□ 0.18
LMCD1-201ENST00000157600 TMF1P82094 1093 aa16.17■□□□□ 0.18
LMCD1-201ENST00000157600 PTMAP06454 111 aaKnown RBP16.16■□□□□ 0.18
LMCD1-201ENST00000157600 TOP2AP11388 1531 aaKnown RBP16.15■□□□□ 0.18
LMCD1-201ENST00000157600 CHMP4AQ9BY43 222 aa16.15■□□□□ 0.18
LMCD1-201ENST00000157600 EIF4G1Q04637 1599 aaKnown RBP16.15■□□□□ 0.18
LMCD1-201ENST00000157600 CARMIL1Q5VZK9 1371 aa16.15■□□□□ 0.18
LMCD1-201ENST00000157600 CUX2O14529 1486 aa16.14■□□□□ 0.17
LMCD1-201ENST00000157600 CARMIL2Q6F5E8 1435 aa16.14■□□□□ 0.17
LMCD1-201ENST00000157600 C14orf37Q86TY3 774 aa16.12■□□□□ 0.17
LMCD1-201ENST00000157600 EIF3AQ14152 1382 aaKnown RBP16.12■□□□□ 0.17
LMCD1-201ENST00000157600 SUPT16HQ9Y5B9 1047 aaKnown RBP16.12■□□□□ 0.17
LMCD1-201ENST00000157600 KCNH8Q96L42 1107 aa16.12■□□□□ 0.17
LMCD1-201ENST00000157600 NOP58Q9Y2X3 529 aaKnown RBP16.11■□□□□ 0.17
LMCD1-201ENST00000157600 CALD1Q05682 793 aaKnown RBP16.1■□□□□ 0.17
LMCD1-201ENST00000157600 RGL3Q3MIN7 710 aa16.1■□□□□ 0.17
LMCD1-201ENST00000157600 POGKQ9P215 609 aa16.1■□□□□ 0.17
LMCD1-201ENST00000157600 MCCP23508 829 aa16.09■□□□□ 0.17
LMCD1-201ENST00000157600 ARXQ96QS3 562 aa16.09■□□□□ 0.17
LMCD1-201ENST00000157600 IRX6P78412 446 aaPredicted RBP16.09■□□□□ 0.17
LMCD1-201ENST00000157600 KTN1Q86UP2 1357 aaKnown RBP16.07■□□□□ 0.16
LMCD1-201ENST00000157600 L1TD1Q5T7N2 865 aaKnown RBP16.07■□□□□ 0.16
LMCD1-201ENST00000157600 PDS5BQ9NTI5 1447 aa16.07■□□□□ 0.16
LMCD1-201ENST00000157600 CHAF1AQ13111 956 aaPredicted RBP16.06■□□□□ 0.16
LMCD1-201ENST00000157600 DNTTIP2Q5QJE6 756 aaKnown RBP16.06■□□□□ 0.16
LMCD1-201ENST00000157600 ROCK2O75116 1388 aaKnown RBP16.06■□□□□ 0.16
LMCD1-201ENST00000157600 HIRIP3Q9BW71 556 aaPredicted RBP16.06■□□□□ 0.16
LMCD1-201ENST00000157600 PHLDB1Q86UU1 1377 aa16.05■□□□□ 0.16
LMCD1-201ENST00000157600 HSCBQ8IWL3 235 aa16.05■□□□□ 0.16
LMCD1-201ENST00000157600 HSP90AB1P08238 724 aaKnown RBP16.04■□□□□ 0.16
LMCD1-201ENST00000157600 CCDC18Q5T9S5 1454 aa16.04■□□□□ 0.16
LMCD1-201ENST00000157600 IPO8O15397 1037 aaKnown RBP16.04■□□□□ 0.16
LMCD1-201ENST00000157600 RALBP1Q15311 655 aa16.04■□□□□ 0.16
LMCD1-201ENST00000157600 PLPPR3Q6T4P5 718 aa16.03■□□□□ 0.16
LMCD1-201ENST00000157600 WIZO95785 1651 aa16.03■□□□□ 0.16
LMCD1-201ENST00000157600 CCDC88BA6NC98 1476 aa16.02■□□□□ 0.16
LMCD1-201ENST00000157600 RSPH4AQ5TD94 716 aa15.99■□□□□ 0.15
LMCD1-201ENST00000157600 FGD1P98174 961 aa15.99■□□□□ 0.15
LMCD1-201ENST00000157600 ANKRD30AQ9BXX3 1397 aa15.99■□□□□ 0.15
LMCD1-201ENST00000157600 ABCC8Q09428 1581 aa15.99■□□□□ 0.15
LMCD1-201ENST00000157600 HDAC5Q9UQL6 1122 aa15.98■□□□□ 0.15
LMCD1-201ENST00000157600 OS9Q13438 667 aaPredicted RBP15.98■□□□□ 0.15
LMCD1-201ENST00000157600 SMARCA4P51532 1647 aa15.97■□□□□ 0.15
LMCD1-201ENST00000157600 DCAF11Q8TEB1 546 aa15.97■□□□□ 0.15
LMCD1-201ENST00000157600 KCNJ4P48050 445 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms