RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 TNIKQ9UKE5 1360 aa15.01□□□□□ -0.01
RGPD5-201ENST00000016946 CARMIL1Q5VZK9 1371 aa15□□□□□ -0.01
RGPD5-201ENST00000016946 RGL3Q3MIN7 710 aa15□□□□□ -0.01
RGPD5-201ENST00000016946 CUX2O14529 1486 aa14.99□□□□□ -0.01
RGPD5-201ENST00000016946 TMC1Q8TDI8 760 aa14.99□□□□□ -0.01
RGPD5-201ENST00000016946 FAM9BQ8IZU0 186 aa14.98□□□□□ -0.01
RGPD5-201ENST00000016946 WDR43Q15061 677 aaKnown RBP eCLIP14.97□□□□□ -0.01
RGPD5-201ENST00000016946 EIF4G2P78344 907 aaKnown RBP eCLIP14.95□□□□□ -0.02
RGPD5-201ENST00000016946 HNRNPUQ00839 825 aaKnown RBP eCLIP14.95□□□□□ -0.02
RGPD5-201ENST00000016946 GTF3C3Q9Y5Q9 886 aa14.95□□□□□ -0.02
RGPD5-201ENST00000016946 CCNB3Q8WWL7 1395 aa14.94□□□□□ -0.02
RGPD5-201ENST00000016946 SALL2Q9Y467 1007 aaPredicted RBP14.93□□□□□ -0.02
RGPD5-201ENST00000016946 A0A0G2JS52 829 aa14.93□□□□□ -0.02
RGPD5-201ENST00000016946 PLEKHG5O94827 1062 aa14.93□□□□□ -0.02
RGPD5-201ENST00000016946 ZBTB7CA1YPR0 619 aa14.93□□□□□ -0.02
RGPD5-201ENST00000016946 NPM2Q86SE8 214 aaKnown RBP14.91□□□□□ -0.02
RGPD5-201ENST00000016946 MYT1Q01538 1121 aa14.91□□□□□ -0.02
RGPD5-201ENST00000016946 SMARCA2P51531 1590 aa14.91□□□□□ -0.02
RGPD5-201ENST00000016946 MRS2Q9HD23 443 aa14.9□□□□□ -0.02
RGPD5-201ENST00000016946 FHAD1B1AJZ9 1412 aa14.9□□□□□ -0.02
RGPD5-201ENST00000016946 HAP1P54257 671 aaPredicted RBP14.9□□□□□ -0.02
RGPD5-201ENST00000016946 EIF4G1Q04637 1599 aaKnown RBP14.89□□□□□ -0.03
RGPD5-201ENST00000016946 TDRD9Q8NDG6 1382 aaKnown RBP14.89□□□□□ -0.03
RGPD5-201ENST00000016946 CDCA8Q53HL2 280 aa14.88□□□□□ -0.03
RGPD5-201ENST00000016946 CARMIL2Q6F5E8 1435 aa14.87□□□□□ -0.03
RGPD5-201ENST00000016946 SOGA1O94964 1423 aa14.86□□□□□ -0.03
RGPD5-201ENST00000016946 MROH2BQ7Z745 1585 aa14.86□□□□□ -0.03
RGPD5-201ENST00000016946 HIRIP3Q9BW71 556 aaPredicted RBP14.85□□□□□ -0.03
RGPD5-201ENST00000016946 MLECQ14165 292 aa14.85□□□□□ -0.03
RGPD5-201ENST00000016946 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.84□□□□□ -0.03
RGPD5-201ENST00000016946 CADPSQ9ULU8 1353 aa14.84□□□□□ -0.03
RGPD5-201ENST00000016946 CCDC88BA6NC98 1476 aa14.84□□□□□ -0.03
RGPD5-201ENST00000016946 POGKQ9P215 609 aa14.83□□□□□ -0.04
RGPD5-201ENST00000016946 CARD11Q9BXL7 1154 aa14.82□□□□□ -0.04
RGPD5-201ENST00000016946 KANK1Q14678 1352 aa14.8□□□□□ -0.04
RGPD5-201ENST00000016946 CFAP53Q96M91 514 aa14.8□□□□□ -0.04
RGPD5-201ENST00000016946 HDGFP51858 240 aaKnown RBP14.8□□□□□ -0.04
RGPD5-201ENST00000016946 KNSTRNQ9Y448 316 aa14.78□□□□□ -0.04
RGPD5-201ENST00000016946 LMOD2Q6P5Q4 547 aa14.78□□□□□ -0.04
RGPD5-201ENST00000016946 MYO15BQ96JP2 1530 aa14.78□□□□□ -0.04
RGPD5-201ENST00000016946 GGT6Q6P531 493 aa14.76□□□□□ -0.05
RGPD5-201ENST00000016946 ANP32AP39687 249 aaKnown RBP14.76□□□□□ -0.05
RGPD5-201ENST00000016946 EFCAB2Q5VUJ9 269 aa14.76□□□□□ -0.05
RGPD5-201ENST00000016946 FKBP8Q14318 412 aa14.75□□□□□ -0.05
RGPD5-201ENST00000016946 UPF2Q9HAU5 1272 aaKnown RBP14.75□□□□□ -0.05
RGPD5-201ENST00000016946 PPM1GO15355 546 aaPredicted RBP14.74□□□□□ -0.05
RGPD5-201ENST00000016946 HSP90AA1P07900 732 aaKnown RBP14.71□□□□□ -0.05
RGPD5-201ENST00000016946 MYH16Q9H6N6 1097 aa14.7□□□□□ -0.06
RGPD5-201ENST00000016946 ATAD2BQ9ULI0 1458 aa14.69□□□□□ -0.06
RGPD5-201ENST00000016946 CCDC136Q96JN2 1154 aa14.69□□□□□ -0.06
RGPD5-201ENST00000016946 SIN3AQ96ST3 1273 aa14.69□□□□□ -0.06
RGPD5-201ENST00000016946 DCAF11Q8TEB1 546 aa14.68□□□□□ -0.06
RGPD5-201ENST00000016946 FMN1Q68DA7 1419 aa14.67□□□□□ -0.06
RGPD5-201ENST00000016946 NUDCQ9Y266 331 aa14.67□□□□□ -0.06
RGPD5-201ENST00000016946 JPH4Q96JJ6 628 aa14.66□□□□□ -0.06
RGPD5-201ENST00000016946 MAPK8IP3Q9UPT6 1336 aa14.64□□□□□ -0.07
RGPD5-201ENST00000016946 VPS8Q8N3P4 1428 aa14.64□□□□□ -0.07
RGPD5-201ENST00000016946 TOP2AP11388 1531 aaKnown RBP14.64□□□□□ -0.07
RGPD5-201ENST00000016946 ARXQ96QS3 562 aa14.64□□□□□ -0.07
RGPD5-201ENST00000016946 ABCC8Q09428 1581 aa14.63□□□□□ -0.07
RGPD5-201ENST00000016946 ARHGAP35Q9NRY4 1499 aa14.62□□□□□ -0.07
RGPD5-201ENST00000016946 PKD2Q13563 968 aa14.62□□□□□ -0.07
RGPD5-201ENST00000016946 MIER1Q8N108 512 aa14.61□□□□□ -0.07
RGPD5-201ENST00000016946 TMF1P82094 1093 aa14.61□□□□□ -0.07
RGPD5-201ENST00000016946 SRPK2P78362 688 aaKnown RBP14.6□□□□□ -0.07
RGPD5-201ENST00000016946 KANK4Q5T7N3 995 aaPredicted RBP14.59□□□□□ -0.07
RGPD5-201ENST00000016946 OSCARQ8IYS5 282 aa14.59□□□□□ -0.07
RGPD5-201ENST00000016946 NEUROD2Q15784 382 aa14.59□□□□□ -0.07
RGPD5-201ENST00000016946 TNNT2P45379 298 aaPredicted RBP14.59□□□□□ -0.07
RGPD5-201ENST00000016946 KIF3BO15066 747 aa14.58□□□□□ -0.07
RGPD5-201ENST00000016946 RAPGEF2Q9Y4G8 1499 aa14.58□□□□□ -0.07
RGPD5-201ENST00000016946 TIMELESSQ9UNS1 1208 aa14.58□□□□□ -0.08
RGPD5-201ENST00000016946 SAFB2Q14151 953 aaKnown RBP eCLIP14.58□□□□□ -0.08
RGPD5-201ENST00000016946 ANKRD30AQ9BXX3 1397 aa14.57□□□□□ -0.08
RGPD5-201ENST00000016946 FANCD2Q9BXW9 1451 aa14.56□□□□□ -0.08
RGPD5-201ENST00000016946 RSPH4AQ5TD94 716 aa14.56□□□□□ -0.08
RGPD5-201ENST00000016946 NUP155O75694 1391 aa14.55□□□□□ -0.08
RGPD5-201ENST00000016946 CYB5RLQ6IPT4 315 aa14.55□□□□□ -0.08
RGPD5-201ENST00000016946 SPAG9O60271 1321 aaKnown RBP14.55□□□□□ -0.08
RGPD5-201ENST00000016946 U2SURPO15042 1029 aaKnown RBP14.54□□□□□ -0.08
RGPD5-201ENST00000016946 STK26Q9P289 416 aa14.54□□□□□ -0.08
RGPD5-201ENST00000016946 SETD5Q9C0A6 1442 aa14.54□□□□□ -0.08
RGPD5-201ENST00000016946 LAS1LQ9Y4W2 734 aaKnown RBP14.53□□□□□ -0.08
RGPD5-201ENST00000016946 SOX12O15370 315 aa14.53□□□□□ -0.08
RGPD5-201ENST00000016946 CC2D1BQ5T0F9 858 aaKnown RBP14.53□□□□□ -0.08
RGPD5-201ENST00000016946 FHOD3Q2V2M9 1422 aa14.53□□□□□ -0.08
RGPD5-201ENST00000016946 HNRNPMP52272 730 aaKnown RBP eCLIP14.52□□□□□ -0.08
RGPD5-201ENST00000016946 PTPRGP23470 1445 aa14.51□□□□□ -0.09
RGPD5-201ENST00000016946 SENP3-EIF4A1A0A087X0R7 540 aa14.51□□□□□ -0.09
RGPD5-201ENST00000016946 PNNQ9H307 717 aaKnown RBP14.5□□□□□ -0.09
RGPD5-201ENST00000016946 WASHC2CQ9Y4E1 1318 aa14.5□□□□□ -0.09
RGPD5-201ENST00000016946 IRX6P78412 446 aaPredicted RBP14.5□□□□□ -0.09
RGPD5-201ENST00000016946 NPHP1O15259 732 aa14.49□□□□□ -0.09
RGPD5-201ENST00000016946 EID1Q9Y6B2 187 aa14.49□□□□□ -0.09
RGPD5-201ENST00000016946 HDGFL2Q7Z4V5 671 aaPredicted RBP14.49□□□□□ -0.09
RGPD5-201ENST00000016946 FTSJ3Q8IY81 847 aaKnown RBP14.49□□□□□ -0.09
RGPD5-201ENST00000016946 ANP32BQ92688 251 aaKnown RBP14.49□□□□□ -0.09
RGPD5-201ENST00000016946 FOXD1Q16676 465 aa14.48□□□□□ -0.09
RGPD5-201ENST00000016946 MORC1Q86VD1 984 aa14.48□□□□□ -0.09
RGPD5-201ENST00000016946 MPHOSPH9Q99550 1183 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms