RNA–Protein interactions for RNA: ENST00000002596.5

HS3ST1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST1, Length 8,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST1-201ENST00000002596 HNRNPUQ00839 825 aaKnown RBP eCLIP16.39■□□□□ 0.21
HS3ST1-201ENST00000002596 ABCC9O60706 1549 aa16.39■□□□□ 0.21
HS3ST1-201ENST00000002596 NPHP1O15259 732 aa16.39■□□□□ 0.21
HS3ST1-201ENST00000002596 C14orf37Q86TY3 774 aa16.38■□□□□ 0.21
HS3ST1-201ENST00000002596 CCDC136Q96JN2 1154 aa16.37■□□□□ 0.21
HS3ST1-201ENST00000002596 ARID4BQ4LE39 1312 aaPredicted RBP16.35■□□□□ 0.21
HS3ST1-201ENST00000002596 ERICH6BQ5W0A0 696 aa16.33■□□□□ 0.2
HS3ST1-201ENST00000002596 P3H3Q8IVL6 736 aa16.32■□□□□ 0.2
HS3ST1-201ENST00000002596 ARID3AQ99856 593 aa16.32■□□□□ 0.2
HS3ST1-201ENST00000002596 KRI1Q8N9T8 703 aaKnown RBP16.3■□□□□ 0.2
HS3ST1-201ENST00000002596 NAP1L2Q9ULW6 460 aaPredicted RBP16.3■□□□□ 0.2
HS3ST1-201ENST00000002596 TONSLQ96HA7 1378 aa16.3■□□□□ 0.2
HS3ST1-201ENST00000002596 WDR43Q15061 677 aaKnown RBP eCLIP16.29■□□□□ 0.2
HS3ST1-201ENST00000002596 NOC3LQ8WTT2 800 aaKnown RBP16.28■□□□□ 0.2
HS3ST1-201ENST00000002596 ISY1Q9ULR0 285 aaKnown RBP16.28■□□□□ 0.2
HS3ST1-201ENST00000002596 TMC1Q8TDI8 760 aa16.26■□□□□ 0.19
HS3ST1-201ENST00000002596 HAP1P54257 671 aaPredicted RBP16.24■□□□□ 0.19
HS3ST1-201ENST00000002596 GOLGA6L22H0YM25 854 aa16.23■□□□□ 0.19
HS3ST1-201ENST00000002596 IRX6P78412 446 aaPredicted RBP16.22■□□□□ 0.19
HS3ST1-201ENST00000002596 DDX10Q13206 875 aaKnown RBP16.21■□□□□ 0.19
HS3ST1-201ENST00000002596 GOLGA6L6A8MZA4 724 aa16.18■□□□□ 0.18
HS3ST1-201ENST00000002596 BECN1Q14457 450 aa16.18■□□□□ 0.18
HS3ST1-201ENST00000002596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.18■□□□□ 0.18
HS3ST1-201ENST00000002596 A0A0U1RQG5 324 aaPredicted RBP16.16■□□□□ 0.18
HS3ST1-201ENST00000002596 PNNQ9H307 717 aaKnown RBP16.15■□□□□ 0.18
HS3ST1-201ENST00000002596 CASC1Q6TDU7 716 aa16.15■□□□□ 0.18
HS3ST1-201ENST00000002596 PPP1R15AO75807 674 aaPredicted RBP16.13■□□□□ 0.17
HS3ST1-201ENST00000002596 TNNT3P45378 269 aaPredicted RBP16.12■□□□□ 0.17
HS3ST1-201ENST00000002596 FGD1P98174 961 aa16.12■□□□□ 0.17
HS3ST1-201ENST00000002596 DRC7Q8IY82 874 aa16.12■□□□□ 0.17
HS3ST1-201ENST00000002596 DDRGK1Q96HY6 314 aa16.12■□□□□ 0.17
HS3ST1-201ENST00000002596 CALRP27797 417 aaKnown RBP16.12■□□□□ 0.17
HS3ST1-201ENST00000002596 ANP32EQ9BTT0 268 aa16.11■□□□□ 0.17
HS3ST1-201ENST00000002596 PATL2C9JE40 543 aaKnown RBP16.11■□□□□ 0.17
HS3ST1-201ENST00000002596 GOLGA2Q08379 1002 aa16.11■□□□□ 0.17
HS3ST1-201ENST00000002596 SENP3-EIF4A1A0A087X0R7 540 aa16.09■□□□□ 0.17
HS3ST1-201ENST00000002596 KIAA2012Q0VF49 1180 aa16.08■□□□□ 0.16
HS3ST1-201ENST00000002596 KDM2AQ9Y2K7 1162 aa16.07■□□□□ 0.16
HS3ST1-201ENST00000002596 WWC1Q8IX03 1113 aa16.07■□□□□ 0.16
HS3ST1-201ENST00000002596 TSPY4P0CV99 314 aa16.06■□□□□ 0.16
HS3ST1-201ENST00000002596 TSPY10P0CW01 314 aa16.06■□□□□ 0.16
HS3ST1-201ENST00000002596 CHAF1AQ13111 956 aaPredicted RBP16.05■□□□□ 0.16
HS3ST1-201ENST00000002596 MRS2Q9HD23 443 aa16.04■□□□□ 0.16
HS3ST1-201ENST00000002596 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.03■□□□□ 0.16
HS3ST1-201ENST00000002596 NRDCO43847 1150 aa16.02■□□□□ 0.16
HS3ST1-201ENST00000002596 KCNJ4P48050 445 aa16■□□□□ 0.15
HS3ST1-201ENST00000002596 LAS1LQ9Y4W2 734 aaKnown RBP16■□□□□ 0.15
HS3ST1-201ENST00000002596 SCRIBQ14160 1630 aa15.98■□□□□ 0.15
HS3ST1-201ENST00000002596 PPM1GO15355 546 aaPredicted RBP15.98■□□□□ 0.15
HS3ST1-201ENST00000002596 OS9Q13438 667 aaPredicted RBP15.97■□□□□ 0.15
HS3ST1-201ENST00000002596 CFAP53Q96M91 514 aa15.96■□□□□ 0.15
HS3ST1-201ENST00000002596 GOLGA6L4A6NEF3 574 aa15.96■□□□□ 0.14
HS3ST1-201ENST00000002596 LMOD2Q6P5Q4 547 aa15.95■□□□□ 0.14
HS3ST1-201ENST00000002596 L1TD1Q5T7N2 865 aaKnown RBP15.95■□□□□ 0.14
HS3ST1-201ENST00000002596 CHIC2Q9UKJ5 165 aa15.95■□□□□ 0.14
HS3ST1-201ENST00000002596 HIRIP3Q9BW71 556 aaPredicted RBP15.95■□□□□ 0.14
HS3ST1-201ENST00000002596 GNL2Q13823 731 aaKnown RBP15.94■□□□□ 0.14
HS3ST1-201ENST00000002596 FTSJ3Q8IY81 847 aaKnown RBP15.93■□□□□ 0.14
HS3ST1-201ENST00000002596 CSRNP3Q8WYN3 585 aa15.93■□□□□ 0.14
HS3ST1-201ENST00000002596 TAF7LQ5H9L4 462 aa15.93■□□□□ 0.14
HS3ST1-201ENST00000002596 HSP90AB1P08238 724 aaKnown RBP15.93■□□□□ 0.14
HS3ST1-201ENST00000002596 MSNP26038 577 aaKnown RBP15.92■□□□□ 0.14
HS3ST1-201ENST00000002596 SPRYD3Q8NCJ5 442 aa15.92■□□□□ 0.14
HS3ST1-201ENST00000002596 CHMP7Q8WUX9 453 aaPredicted RBP15.92■□□□□ 0.14
HS3ST1-201ENST00000002596 CREBRFQ8IUR6 639 aa15.92■□□□□ 0.14
HS3ST1-201ENST00000002596 MTUS2Q5JR59 1369 aa15.9■□□□□ 0.14
HS3ST1-201ENST00000002596 CDCA8Q53HL2 280 aa15.89■□□□□ 0.13
HS3ST1-201ENST00000002596 EIF4G2P78344 907 aaKnown RBP eCLIP15.89■□□□□ 0.13
HS3ST1-201ENST00000002596 CHMP4BQ9H444 224 aaKnown RBP15.86■□□□□ 0.13
HS3ST1-201ENST00000002596 GOLGA6L1Q8N7Z2 621 aa15.86■□□□□ 0.13
HS3ST1-201ENST00000002596 CNKSR2Q8WXI2 1034 aa15.86■□□□□ 0.13
HS3ST1-201ENST00000002596 MAPK8IP3Q9UPT6 1336 aa15.81■□□□□ 0.12
HS3ST1-201ENST00000002596 KNSTRNQ9Y448 316 aa15.81■□□□□ 0.12
HS3ST1-201ENST00000002596 APPP05067 770 aa15.8■□□□□ 0.12
HS3ST1-201ENST00000002596 PTMSP20962 102 aa15.8■□□□□ 0.12
HS3ST1-201ENST00000002596 MIER1Q8N108 512 aa15.79■□□□□ 0.12
HS3ST1-201ENST00000002596 CEP89Q96ST8 783 aa15.78■□□□□ 0.12
HS3ST1-201ENST00000002596 NEUROD2Q15784 382 aa15.78■□□□□ 0.12
HS3ST1-201ENST00000002596 RGS3P49796 1198 aa15.78■□□□□ 0.12
HS3ST1-201ENST00000002596 SETQ01105 290 aaPredicted RBP15.78■□□□□ 0.12
HS3ST1-201ENST00000002596 VPS53Q5VIR6 699 aa15.78■□□□□ 0.12
HS3ST1-201ENST00000002596 NUDCQ9Y266 331 aa15.77■□□□□ 0.12
HS3ST1-201ENST00000002596 TMX4Q9H1E5 349 aaPredicted RBP15.76■□□□□ 0.11
HS3ST1-201ENST00000002596 RSF1Q96T23 1441 aaPredicted RBP15.76■□□□□ 0.11
HS3ST1-201ENST00000002596 KCNH8Q96L42 1107 aa15.76■□□□□ 0.11
HS3ST1-201ENST00000002596 SUPT16HQ9Y5B9 1047 aaKnown RBP15.75■□□□□ 0.11
HS3ST1-201ENST00000002596 HSP90B1P14625 803 aaKnown RBP15.74■□□□□ 0.11
HS3ST1-201ENST00000002596 POGKQ9P215 609 aa15.74■□□□□ 0.11
HS3ST1-201ENST00000002596 MS4A1P11836 297 aa15.73■□□□□ 0.11
HS3ST1-201ENST00000002596 FRAT1Q92837 279 aaPredicted RBP15.73■□□□□ 0.11
HS3ST1-201ENST00000002596 NOP58Q9Y2X3 529 aaKnown RBP15.71■□□□□ 0.11
HS3ST1-201ENST00000002596 RRP12Q5JTH9 1297 aaKnown RBP15.7■□□□□ 0.1
HS3ST1-201ENST00000002596 PLEKHD1A6NEE1 506 aa15.7■□□□□ 0.1
HS3ST1-201ENST00000002596 MCCP23508 829 aa15.69■□□□□ 0.1
HS3ST1-201ENST00000002596 HDGFP51858 240 aaKnown RBP15.69■□□□□ 0.1
HS3ST1-201ENST00000002596 RGL3Q3MIN7 710 aa15.69■□□□□ 0.1
HS3ST1-201ENST00000002596 RASSF8Q8NHQ8 419 aa15.69■□□□□ 0.1
HS3ST1-201ENST00000002596 ZNF330Q9Y3S2 320 aaPredicted RBP15.69■□□□□ 0.1
HS3ST1-201ENST00000002596 PES1O00541 588 aaKnown RBP15.68■□□□□ 0.1
HS3ST1-201ENST00000002596 HSCBQ8IWL3 235 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms