RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 Arap1Q4LDD4 1452 aa16.54■□□□□ 0.24
Lig3-212ENSMUST00000173727 Polr1aO35134 1717 aaKnown RBP16.53■□□□□ 0.24
Lig3-212ENSMUST00000173727 Pla2r1Q62028 1487 aa16.53■□□□□ 0.24
Lig3-212ENSMUST00000173727 Grin2aP35436 1464 aa16.53■□□□□ 0.24
Lig3-212ENSMUST00000173727 Erich3F6QRE9 1637 aa16.53■□□□□ 0.24
Lig3-212ENSMUST00000173727 Cux1P53564 1515 aa16.52■□□□□ 0.24
Lig3-212ENSMUST00000173727 Ap3b1Q9Z1T1 1105 aa16.52■□□□□ 0.24
Lig3-212ENSMUST00000173727 Pbrm1Q8BSQ9 1634 aaKnown RBP16.49■□□□□ 0.23
Lig3-212ENSMUST00000173727 Plekhg3Q4VAC9 1341 aa16.49■□□□□ 0.23
Lig3-212ENSMUST00000173727 Arhgef5E9Q7D5 1581 aa16.49■□□□□ 0.23
Lig3-212ENSMUST00000173727 Setd1bQ8CFT2 1985 aa16.48■□□□□ 0.23
Lig3-212ENSMUST00000173727 EprsQ8CGC7 1512 aaKnown RBP16.48■□□□□ 0.23
Lig3-212ENSMUST00000173727 Fyco1Q8VDC1 1437 aa16.47■□□□□ 0.23
Lig3-212ENSMUST00000173727 Rpap1Q80TE0 1409 aa16.47■□□□□ 0.23
Lig3-212ENSMUST00000173727 UbtfP25976 765 aaKnown RBP16.47■□□□□ 0.23
Lig3-212ENSMUST00000173727 Nup160Q9Z0W3 1402 aaKnown RBP16.45■□□□□ 0.22
Lig3-212ENSMUST00000173727 Pcf11G3X9Z4 1553 aa16.43■□□□□ 0.22
Lig3-212ENSMUST00000173727 Lmo7E9PYF4 1699 aaKnown RBP16.42■□□□□ 0.22
Lig3-212ENSMUST00000173727 Tiam1Q60610 1591 aa16.39■□□□□ 0.21
Lig3-212ENSMUST00000173727 Gpatch8A2A6A1 1505 aa16.39■□□□□ 0.21
Lig3-212ENSMUST00000173727 Cc2d2bA0A286YDU8 1405 aa16.39■□□□□ 0.21
Lig3-212ENSMUST00000173727 WizO88286 1684 aaKnown RBP16.39■□□□□ 0.21
Lig3-212ENSMUST00000173727 Adamts12Q811B3 1600 aa16.38■□□□□ 0.21
Lig3-212ENSMUST00000173727 CadpsQ80TJ1 1355 aa16.38■□□□□ 0.21
Lig3-212ENSMUST00000173727 Eif4g3Q80XI3 1579 aaKnown RBP16.37■□□□□ 0.21
Lig3-212ENSMUST00000173727 Gm7298A0A0N4SVU1 1476 aa16.37■□□□□ 0.21
Lig3-212ENSMUST00000173727 TchhA0A0B4J1F9 1599 aa16.35■□□□□ 0.21
Lig3-212ENSMUST00000173727 CntlnA2AM05 1397 aa16.35■□□□□ 0.21
Lig3-212ENSMUST00000173727 Naip1Q9QWK5 1403 aa16.35■□□□□ 0.21
Lig3-212ENSMUST00000173727 Abca5Q8K448 1642 aa16.35■□□□□ 0.21
Lig3-212ENSMUST00000173727 Mier1Q5UAK0 511 aa16.35■□□□□ 0.21
Lig3-212ENSMUST00000173727 Aebp1Q640N1 1128 aa16.34■□□□□ 0.21
Lig3-212ENSMUST00000173727 Supt5hO55201 1082 aaKnown RBP16.34■□□□□ 0.21
Lig3-212ENSMUST00000173727 Rusc2Q80U22 1514 aa16.34■□□□□ 0.21
Lig3-212ENSMUST00000173727 BlmO88700 1416 aa16.33■□□□□ 0.2
Lig3-212ENSMUST00000173727 Abca16E9PWJ7 1678 aa16.32■□□□□ 0.2
Lig3-212ENSMUST00000173727 Slx4Q6P1D7 1565 aa16.32■□□□□ 0.2
Lig3-212ENSMUST00000173727 PxdnQ3UQ28 1475 aa16.31■□□□□ 0.2
Lig3-212ENSMUST00000173727 Soga1E1U8D0 1418 aa16.3■□□□□ 0.2
Lig3-212ENSMUST00000173727 Peg3Q3URU2 1571 aa16.28■□□□□ 0.2
Lig3-212ENSMUST00000173727 Lmod2Q3UHZ5 550 aa16.26■□□□□ 0.19
Lig3-212ENSMUST00000173727 Arhgap27A2AB59 869 aa16.25■□□□□ 0.19
Lig3-212ENSMUST00000173727 Abcc2Q8VI47 1543 aa16.21■□□□□ 0.19
Lig3-212ENSMUST00000173727 Kif27Q7M6Z4 1394 aa16.21■□□□□ 0.19
Lig3-212ENSMUST00000173727 WrnO09053 1401 aa16.2■□□□□ 0.18
Lig3-212ENSMUST00000173727 Gm1043A0A140LJC2 1431 aa16.19■□□□□ 0.18
Lig3-212ENSMUST00000173727 Ncapd3Q6ZQK0 1506 aa16.18■□□□□ 0.18
Lig3-212ENSMUST00000173727 Shroom2A2ALU4 1481 aa16.16■□□□□ 0.18
Lig3-212ENSMUST00000173727 NefmP08553 848 aa16.14■□□□□ 0.17
Lig3-212ENSMUST00000173727 Map3k4O08648 1597 aa16.12■□□□□ 0.17
Lig3-212ENSMUST00000173727 Neurod1Q60867 357 aa16.12■□□□□ 0.17
Lig3-212ENSMUST00000173727 Fgd6Q69ZL1 1399 aa16.11■□□□□ 0.17
Lig3-212ENSMUST00000173727 Dnmt1P13864 1620 aaKnown RBP16.11■□□□□ 0.17
Lig3-212ENSMUST00000173727 Rapgef6Q5NCJ1 1609 aa16.09■□□□□ 0.17
Lig3-212ENSMUST00000173727 AknaQ80VW7 1404 aa16.08■□□□□ 0.17
Lig3-212ENSMUST00000173727 BC005561E9Q5E2 1589 aa16.07■□□□□ 0.16
Lig3-212ENSMUST00000173727 Neo1P97798 1493 aa16.07■□□□□ 0.16
Lig3-212ENSMUST00000173727 Arhgap31A6X8Z5 1425 aa16.03■□□□□ 0.16
Lig3-212ENSMUST00000173727 Ccnb3Q810T2 1396 aa16.03■□□□□ 0.16
Lig3-212ENSMUST00000173727 NexmifQ5DTT1 1515 aa16.03■□□□□ 0.16
Lig3-212ENSMUST00000173727 Lmtk2Q3TYD6 1471 aa16.03■□□□□ 0.16
Lig3-212ENSMUST00000173727 3425401B19RikD3Z1D3 1412 aa16.02■□□□□ 0.16
Lig3-212ENSMUST00000173727 Mug1P28665 1476 aa16.01■□□□□ 0.15
Lig3-212ENSMUST00000173727 Jph4Q80WT0 628 aa16.01■□□□□ 0.15
Lig3-212ENSMUST00000173727 Ncoa2Q61026 1462 aa16■□□□□ 0.15
Lig3-212ENSMUST00000173727 Ccdc141E9Q8Q6 1531 aa16■□□□□ 0.15
Lig3-212ENSMUST00000173727 Fam50aQ9WV03 339 aaKnown RBP16■□□□□ 0.15
Lig3-212ENSMUST00000173727 Ncoa3O09000 1398 aa15.99■□□□□ 0.15
Lig3-212ENSMUST00000173727 Arhgef11Q68FM7 1552 aa15.99■□□□□ 0.15
Lig3-212ENSMUST00000173727 Gcc2Q8CHG3 1679 aa15.99■□□□□ 0.15
Lig3-212ENSMUST00000173727 Arhgef12Q8R4H2 1543 aaKnown RBP15.99■□□□□ 0.15
Lig3-212ENSMUST00000173727 Zcchc11B2RX14 1644 aaKnown RBP15.98■□□□□ 0.15
Lig3-212ENSMUST00000173727 Rrbp1Q99PL5 1605 aaKnown RBP15.96■□□□□ 0.15
Lig3-212ENSMUST00000173727 Gm14025A2AP89 1413 aa15.95■□□□□ 0.14
Lig3-212ENSMUST00000173727 Fkbp15Q6P9Q6 1216 aaKnown RBP15.95■□□□□ 0.14
Lig3-212ENSMUST00000173727 Dhx57Q6P5D3 1388 aaKnown RBP15.94■□□□□ 0.14
Lig3-212ENSMUST00000173727 Magi1Q6RHR9 1471 aa15.94■□□□□ 0.14
Lig3-212ENSMUST00000173727 Cdc42bpaQ3UU96 1719 aa15.93■□□□□ 0.14
Lig3-212ENSMUST00000173727 Abcc1O35379 1528 aa15.93■□□□□ 0.14
Lig3-212ENSMUST00000173727 Mroh2aD3Z750 1679 aa15.93■□□□□ 0.14
Lig3-212ENSMUST00000173727 Kdm5bQ80Y84 1544 aa15.91■□□□□ 0.14
Lig3-212ENSMUST00000173727 A2mQ6GQT1 1474 aa15.91■□□□□ 0.14
Lig3-212ENSMUST00000173727 Kiaa1551Q5DTW7 1521 aa15.91■□□□□ 0.14
Lig3-212ENSMUST00000173727 Mia2Q91ZV0 1396 aa15.9■□□□□ 0.14
Lig3-212ENSMUST00000173727 Chd1P40201 1711 aa15.9■□□□□ 0.14
Lig3-212ENSMUST00000173727 Fam163aQ8CAA5 168 aa15.89■□□□□ 0.13
Lig3-212ENSMUST00000173727 Naip2Q9QUK4 1447 aa15.88■□□□□ 0.13
Lig3-212ENSMUST00000173727 Prex2Q3LAC4 1598 aa15.87■□□□□ 0.13
Lig3-212ENSMUST00000173727 Fhad1A6PWD2 1420 aa15.86■□□□□ 0.13
Lig3-212ENSMUST00000173727 Mapkbp1Q6NS57 1503 aa15.86■□□□□ 0.13
Lig3-212ENSMUST00000173727 Pelp1Q9DBD5 1123 aaKnown RBP15.86■□□□□ 0.13
Lig3-212ENSMUST00000173727 Fancd2Q80V62 1450 aa15.84■□□□□ 0.13
Lig3-212ENSMUST00000173727 Chic2Q9D9G3 165 aa15.84■□□□□ 0.13
Lig3-212ENSMUST00000173727 Adcy10Q8C0T9 1614 aa15.83■□□□□ 0.13
Lig3-212ENSMUST00000173727 Vps8Q0P5W1 1427 aa15.83■□□□□ 0.12
Lig3-212ENSMUST00000173727 Arhgef40Q3UPH7 1517 aa15.82■□□□□ 0.12
Lig3-212ENSMUST00000173727 UacaQ8CGB3 1411 aa15.82■□□□□ 0.12
Lig3-212ENSMUST00000173727 Plekhh2Q8C115 1491 aa15.8■□□□□ 0.12
Lig3-212ENSMUST00000173727 Abcc5Q9R1X5 1436 aa15.78■□□□□ 0.12
Lig3-212ENSMUST00000173727 Pabpn1Q8CCS6 302 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms