RNA–Protein interactions for RNA: ENSMUST00000165375.2

Hoxc4-202, Transcript of Homeobox protein Hox-C4, mousemouse

TSL 1 (best) BASIC

Gene Hoxc4, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-202ENSMUST00000165375 Nup160Q9Z0W3 1402 aaKnown RBP25.94■■□□□ 1.74
Hoxc4-202ENSMUST00000165375 Eif4g3Q80XI3 1579 aaKnown RBP25.91■■□□□ 1.74
Hoxc4-202ENSMUST00000165375 Cc2d2bA0A286YDU8 1405 aa25.87■■□□□ 1.73
Hoxc4-202ENSMUST00000165375 Eea1Q8BL66 1411 aa25.87■■□□□ 1.73
Hoxc4-202ENSMUST00000165375 Setd1bQ8CFT2 1985 aa25.84■■□□□ 1.73
Hoxc4-202ENSMUST00000165375 Polr1aO35134 1717 aaKnown RBP25.84■■□□□ 1.73
Hoxc4-202ENSMUST00000165375 Setd5Q5XJV7 1441 aa25.83■■□□□ 1.73
Hoxc4-202ENSMUST00000165375 EprsQ8CGC7 1512 aaKnown RBP25.83■■□□□ 1.73
Hoxc4-202ENSMUST00000165375 Rpap1Q80TE0 1409 aa25.82■■□□□ 1.72
Hoxc4-202ENSMUST00000165375 Gpatch8A2A6A1 1505 aa25.81■■□□□ 1.72
Hoxc4-202ENSMUST00000165375 Cux1P53564 1515 aa25.79■■□□□ 1.72
Hoxc4-202ENSMUST00000165375 Rusc2Q80U22 1514 aa25.79■■□□□ 1.72
Hoxc4-202ENSMUST00000165375 Ankrd26Q811D2 1581 aa25.78■■□□□ 1.72
Hoxc4-202ENSMUST00000165375 Supt5hO55201 1082 aaKnown RBP25.78■■□□□ 1.72
Hoxc4-202ENSMUST00000165375 Fyco1Q8VDC1 1437 aa25.75■■□□□ 1.71
Hoxc4-202ENSMUST00000165375 Erich3F6QRE9 1637 aa25.7■■□□□ 1.7
Hoxc4-202ENSMUST00000165375 Adamts12Q811B3 1600 aa25.69■■□□□ 1.7
Hoxc4-202ENSMUST00000165375 CadpsQ80TJ1 1355 aa25.69■■□□□ 1.7
Hoxc4-202ENSMUST00000165375 Arap1Q4LDD4 1452 aa25.69■■□□□ 1.7
Hoxc4-202ENSMUST00000165375 WizO88286 1684 aaKnown RBP25.66■■□□□ 1.7
Hoxc4-202ENSMUST00000165375 Gm7298A0A0N4SVU1 1476 aa25.65■■□□□ 1.7
Hoxc4-202ENSMUST00000165375 Las1lA2BE28 776 aaKnown RBP25.65■■□□□ 1.7
Hoxc4-202ENSMUST00000165375 Ap3b1Q9Z1T1 1105 aa25.64■■□□□ 1.7
Hoxc4-202ENSMUST00000165375 TchhA0A0B4J1F9 1599 aa25.64■■□□□ 1.69
Hoxc4-202ENSMUST00000165375 Arhgef5E9Q7D5 1581 aa25.61■■□□□ 1.69
Hoxc4-202ENSMUST00000165375 Neurod1Q60867 357 aa25.59■■□□□ 1.69
Hoxc4-202ENSMUST00000165375 PxdnQ3UQ28 1475 aa25.59■■□□□ 1.69
Hoxc4-202ENSMUST00000165375 Abca16E9PWJ7 1678 aa25.58■■□□□ 1.68
Hoxc4-202ENSMUST00000165375 Soga1E1U8D0 1418 aa25.58■■□□□ 1.68
Hoxc4-202ENSMUST00000165375 Abca5Q8K448 1642 aa25.56■■□□□ 1.68
Hoxc4-202ENSMUST00000165375 Aebp1Q640N1 1128 aa25.56■■□□□ 1.68
Hoxc4-202ENSMUST00000165375 Lmo7E9PYF4 1699 aaKnown RBP25.56■■□□□ 1.68
Hoxc4-202ENSMUST00000165375 Arhgap27A2AB59 869 aa25.55■■□□□ 1.68
Hoxc4-202ENSMUST00000165375 Pcf11G3X9Z4 1553 aa25.54■■□□□ 1.68
Hoxc4-202ENSMUST00000165375 Plekhg3Q4VAC9 1341 aa25.51■■□□□ 1.67
Hoxc4-202ENSMUST00000165375 CntlnA2AM05 1397 aa25.51■■□□□ 1.67
Hoxc4-202ENSMUST00000165375 Abcc2Q8VI47 1543 aa25.49■■□□□ 1.67
Hoxc4-202ENSMUST00000165375 Fgd6Q69ZL1 1399 aa25.45■■□□□ 1.67
Hoxc4-202ENSMUST00000165375 Tiam1Q60610 1591 aa25.45■■□□□ 1.66
Hoxc4-202ENSMUST00000165375 Naip1Q9QWK5 1403 aa25.45■■□□□ 1.66
Hoxc4-202ENSMUST00000165375 BlmO88700 1416 aa25.44■■□□□ 1.66
Hoxc4-202ENSMUST00000165375 WrnO09053 1401 aa25.4■■□□□ 1.66
Hoxc4-202ENSMUST00000165375 Shroom2A2ALU4 1481 aa25.38■■□□□ 1.65
Hoxc4-202ENSMUST00000165375 Map3k4O08648 1597 aa25.37■■□□□ 1.65
Hoxc4-202ENSMUST00000165375 UbtfP25976 765 aaKnown RBP25.36■■□□□ 1.65
Hoxc4-202ENSMUST00000165375 Dnmt1P13864 1620 aaKnown RBP25.35■■□□□ 1.65
Hoxc4-202ENSMUST00000165375 Slx4Q6P1D7 1565 aa25.34■■□□□ 1.65
Hoxc4-202ENSMUST00000165375 Kif27Q7M6Z4 1394 aa25.33■■□□□ 1.65
Hoxc4-202ENSMUST00000165375 Peg3Q3URU2 1571 aa25.33■■□□□ 1.64
Hoxc4-202ENSMUST00000165375 AknaQ80VW7 1404 aa25.3■■□□□ 1.64
Hoxc4-202ENSMUST00000165375 Lmod2Q3UHZ5 550 aa25.27■■□□□ 1.64
Hoxc4-202ENSMUST00000165375 Neo1P97798 1493 aa25.26■■□□□ 1.63
Hoxc4-202ENSMUST00000165375 Gm1043A0A140LJC2 1431 aa25.24■■□□□ 1.63
Hoxc4-202ENSMUST00000165375 BC005561E9Q5E2 1589 aa25.24■■□□□ 1.63
Hoxc4-202ENSMUST00000165375 Jph4Q80WT0 628 aa25.22■■□□□ 1.63
Hoxc4-202ENSMUST00000165375 NefmP08553 848 aa25.21■■□□□ 1.63
Hoxc4-202ENSMUST00000165375 Rapgef6Q5NCJ1 1609 aa25.15■■□□□ 1.62
Hoxc4-202ENSMUST00000165375 Arhgap31A6X8Z5 1425 aa25.15■■□□□ 1.62
Hoxc4-202ENSMUST00000165375 Abcc1O35379 1528 aa25.14■■□□□ 1.61
Hoxc4-202ENSMUST00000165375 Gm14025A2AP89 1413 aa25.13■■□□□ 1.61
Hoxc4-202ENSMUST00000165375 Myt1Q8CFC2 1127 aa25.13■■□□□ 1.61
Hoxc4-202ENSMUST00000165375 Arhgef12Q8R4H2 1543 aaKnown RBP25.13■■□□□ 1.61
Hoxc4-202ENSMUST00000165375 Pabpn1Q8CCS6 302 aaKnown RBP25.1■■□□□ 1.61
Hoxc4-202ENSMUST00000165375 Ncoa2Q61026 1462 aa25.08■■□□□ 1.61
Hoxc4-202ENSMUST00000165375 Mier1Q5UAK0 511 aa25.08■■□□□ 1.61
Hoxc4-202ENSMUST00000165375 Anks4bQ8K3X6 423 aa25.08■■□□□ 1.61
Hoxc4-202ENSMUST00000165375 Pelp1Q9DBD5 1123 aaKnown RBP25.08■■□□□ 1.61
Hoxc4-202ENSMUST00000165375 Rrbp1Q99PL5 1605 aaKnown RBP25.07■■□□□ 1.6
Hoxc4-202ENSMUST00000165375 Zcchc11B2RX14 1644 aaKnown RBP25.06■■□□□ 1.6
Hoxc4-202ENSMUST00000165375 Ccdc141E9Q8Q6 1531 aa25.06■■□□□ 1.6
Hoxc4-202ENSMUST00000165375 Ncoa3O09000 1398 aa25.04■■□□□ 1.6
Hoxc4-202ENSMUST00000165375 Mug1P28665 1476 aa25.04■■□□□ 1.6
Hoxc4-202ENSMUST00000165375 Chd1P40201 1711 aa25.01■■□□□ 1.59
Hoxc4-202ENSMUST00000165375 Arhgef11Q68FM7 1552 aa25.01■■□□□ 1.59
Hoxc4-202ENSMUST00000165375 Lmtk2Q3TYD6 1471 aa25■■□□□ 1.59
Hoxc4-202ENSMUST00000165375 Fkbp15Q6P9Q6 1216 aaKnown RBP25■■□□□ 1.59
Hoxc4-202ENSMUST00000165375 Ncapd3Q6ZQK0 1506 aa24.99■■□□□ 1.59
Hoxc4-202ENSMUST00000165375 Ccnb3Q810T2 1396 aa24.98■■□□□ 1.59
Hoxc4-202ENSMUST00000165375 Magi1Q6RHR9 1471 aa24.97■■□□□ 1.59
Hoxc4-202ENSMUST00000165375 Fam163aQ8CAA5 168 aa24.97■■□□□ 1.59
Hoxc4-202ENSMUST00000165375 NexmifQ5DTT1 1515 aa24.97■■□□□ 1.59
Hoxc4-202ENSMUST00000165375 Dhx57Q6P5D3 1388 aaKnown RBP24.97■■□□□ 1.59
Hoxc4-202ENSMUST00000165375 1700123L14RikQ3V2K7 440 aa24.95■■□□□ 1.59
Hoxc4-202ENSMUST00000165375 Mroh2aD3Z750 1679 aa24.93■■□□□ 1.58
Hoxc4-202ENSMUST00000165375 Ythdc2B2RR83 1445 aaKnown RBP24.92■■□□□ 1.58
Hoxc4-202ENSMUST00000165375 Kiaa1551Q5DTW7 1521 aa24.9■■□□□ 1.58
Hoxc4-202ENSMUST00000165375 3425401B19RikD3Z1D3 1412 aa24.9■■□□□ 1.58
Hoxc4-202ENSMUST00000165375 Kdm5bQ80Y84 1544 aa24.89■■□□□ 1.58
Hoxc4-202ENSMUST00000165375 Gapvd1Q6PAR5 1458 aa24.88■■□□□ 1.57
Hoxc4-202ENSMUST00000165375 Sall2Q9QX96 1004 aa24.88■■□□□ 1.57
Hoxc4-202ENSMUST00000165375 Cdc42bpaQ3UU96 1719 aa24.86■■□□□ 1.57
Hoxc4-202ENSMUST00000165375 Fancd2Q80V62 1450 aa24.86■■□□□ 1.57
Hoxc4-202ENSMUST00000165375 Mapkbp1Q6NS57 1503 aa24.86■■□□□ 1.57
Hoxc4-202ENSMUST00000165375 Gcc2Q8CHG3 1679 aa24.85■■□□□ 1.57
Hoxc4-202ENSMUST00000165375 CenpbP27790 599 aa24.82■■□□□ 1.56
Hoxc4-202ENSMUST00000165375 Prex2Q3LAC4 1598 aa24.81■■□□□ 1.56
Hoxc4-202ENSMUST00000165375 Igf1rQ60751 1373 aa24.81■■□□□ 1.56
Hoxc4-202ENSMUST00000165375 PtprtQ99M80 1454 aa24.8■■□□□ 1.56
Hoxc4-202ENSMUST00000165375 Cep170Q6A065 1588 aa24.75■■□□□ 1.55
Hoxc4-202ENSMUST00000165375 NhsB1AV60 1647 aa24.75■■□□□ 1.55
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms