RNA–Protein interactions for RNA: ENSMUST00000120580.7

Prpf39-201, Transcript of Pre-mRNA-processing factor 39, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Prpf39, Length 4,069 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39-201ENSMUST00000120580 Ift140E9PY46 1464 aa15.76■□□□□ 0.11
Prpf39-201ENSMUST00000120580 Rad54l2Q99NG0 1466 aa15.75■□□□□ 0.11
Prpf39-201ENSMUST00000120580 WizO88286 1684 aaKnown RBP15.73■□□□□ 0.11
Prpf39-201ENSMUST00000120580 EprsQ8CGC7 1512 aaKnown RBP15.71■□□□□ 0.11
Prpf39-201ENSMUST00000120580 Dnmt1P13864 1620 aaKnown RBP15.71■□□□□ 0.11
Prpf39-201ENSMUST00000120580 BC005561E9Q5E2 1589 aa15.71■□□□□ 0.1
Prpf39-201ENSMUST00000120580 Peg3Q3URU2 1571 aa15.67■□□□□ 0.1
Prpf39-201ENSMUST00000120580 Map3k4O08648 1597 aa15.65■□□□□ 0.1
Prpf39-201ENSMUST00000120580 Arap1Q4LDD4 1452 aa15.64■□□□□ 0.09
Prpf39-201ENSMUST00000120580 Pcf11G3X9Z4 1553 aa15.64■□□□□ 0.09
Prpf39-201ENSMUST00000120580 PxdnQ3UQ28 1475 aa15.63■□□□□ 0.09
Prpf39-201ENSMUST00000120580 Arhgef5E9Q7D5 1581 aa15.6■□□□□ 0.09
Prpf39-201ENSMUST00000120580 Polr1aO35134 1717 aaKnown RBP15.59■□□□□ 0.09
Prpf39-201ENSMUST00000120580 Chd1P40201 1711 aa15.58■□□□□ 0.09
Prpf39-201ENSMUST00000120580 Slx4Q6P1D7 1565 aa15.57■□□□□ 0.08
Prpf39-201ENSMUST00000120580 Npm1Q61937 292 aaKnown RBP15.57■□□□□ 0.08
Prpf39-201ENSMUST00000120580 Carmil1Q6EDY6 1374 aa15.57■□□□□ 0.08
Prpf39-201ENSMUST00000120580 Cul7Q8VE73 1689 aa15.55■□□□□ 0.08
Prpf39-201ENSMUST00000120580 TchhA0A0B4J1F9 1599 aa15.55■□□□□ 0.08
Prpf39-201ENSMUST00000120580 Cc2d2bA0A286YDU8 1405 aa15.53■□□□□ 0.08
Prpf39-201ENSMUST00000120580 BlmO88700 1416 aa15.52■□□□□ 0.08
Prpf39-201ENSMUST00000120580 Soga1E1U8D0 1418 aa15.51■□□□□ 0.07
Prpf39-201ENSMUST00000120580 Tiam1Q60610 1591 aa15.51■□□□□ 0.07
Prpf39-201ENSMUST00000120580 CadpsQ80TJ1 1355 aa15.49■□□□□ 0.07
Prpf39-201ENSMUST00000120580 Il27Q8K3I6 234 aa15.46■□□□□ 0.07
Prpf39-201ENSMUST00000120580 Mroh2aD3Z750 1679 aa15.46■□□□□ 0.07
Prpf39-201ENSMUST00000120580 Cdc42bpaQ3UU96 1719 aa15.46■□□□□ 0.07
Prpf39-201ENSMUST00000120580 Shroom2A2ALU4 1481 aa15.45■□□□□ 0.06
Prpf39-201ENSMUST00000120580 Gm7298A0A0N4SVU1 1476 aa15.45■□□□□ 0.06
Prpf39-201ENSMUST00000120580 Clip1Q922J3 1391 aa15.44■□□□□ 0.06
Prpf39-201ENSMUST00000120580 Fyco1Q8VDC1 1437 aa15.43■□□□□ 0.06
Prpf39-201ENSMUST00000120580 Gm1043A0A140LJC2 1431 aa15.42■□□□□ 0.06
Prpf39-201ENSMUST00000120580 Rpap1Q80TE0 1409 aa15.41■□□□□ 0.06
Prpf39-201ENSMUST00000120580 Arhgef12Q8R4H2 1543 aaKnown RBP15.39■□□□□ 0.05
Prpf39-201ENSMUST00000120580 Gab3Q8BSM5 595 aa15.39■□□□□ 0.05
Prpf39-201ENSMUST00000120580 Arhgef11Q68FM7 1552 aa15.39■□□□□ 0.05
Prpf39-201ENSMUST00000120580 Naip1Q9QWK5 1403 aa15.37■□□□□ 0.05
Prpf39-201ENSMUST00000120580 Rrbp1Q99PL5 1605 aaKnown RBP15.36■□□□□ 0.05
Prpf39-201ENSMUST00000120580 Gcc2Q8CHG3 1679 aa15.36■□□□□ 0.05
Prpf39-201ENSMUST00000120580 Kdm5bQ80Y84 1544 aa15.35■□□□□ 0.05
Prpf39-201ENSMUST00000120580 Lmtk2Q3TYD6 1471 aa15.35■□□□□ 0.05
Prpf39-201ENSMUST00000120580 Kiaa1551Q5DTW7 1521 aa15.34■□□□□ 0.05
Prpf39-201ENSMUST00000120580 Rapgef6Q5NCJ1 1609 aa15.34■□□□□ 0.05
Prpf39-201ENSMUST00000120580 Kiaa1210E9Q0C6 1637 aa15.32■□□□□ 0.04
Prpf39-201ENSMUST00000120580 NhsB1AV60 1647 aa15.31■□□□□ 0.04
Prpf39-201ENSMUST00000120580 Eea1Q8BL66 1411 aa15.31■□□□□ 0.04
Prpf39-201ENSMUST00000120580 Fam208aQ69ZR9 1610 aaKnown RBP15.29■□□□□ 0.04
Prpf39-201ENSMUST00000120580 Pdcd11Q6NS46 1862 aaKnown RBP15.25■□□□□ 0.03
Prpf39-201ENSMUST00000120580 Abcc1O35379 1528 aa15.22■□□□□ 0.03
Prpf39-201ENSMUST00000120580 3425401B19RikD3Z1D3 1412 aa15.21■□□□□ 0.02
Prpf39-201ENSMUST00000120580 Ncapd3Q6ZQK0 1506 aa15.2■□□□□ 0.02
Prpf39-201ENSMUST00000120580 Neo1P97798 1493 aa15.19■□□□□ 0.02
Prpf39-201ENSMUST00000120580 Setd5Q5XJV7 1441 aa15.19■□□□□ 0.02
Prpf39-201ENSMUST00000120580 Mapkbp1Q6NS57 1503 aa15.19■□□□□ 0.02
Prpf39-201ENSMUST00000120580 Kdm6bQ5NCY0 1641 aa15.18■□□□□ 0.02
Prpf39-201ENSMUST00000120580 Abca8bQ8K440 1620 aa15.18■□□□□ 0.02
Prpf39-201ENSMUST00000120580 Ncoa3O09000 1398 aa15.18■□□□□ 0.02
Prpf39-201ENSMUST00000120580 CntlnA2AM05 1397 aa15.15■□□□□ 0.02
Prpf39-201ENSMUST00000120580 Dennd4bQ3U1Y4 1499 aa15.15■□□□□ 0.02
Prpf39-201ENSMUST00000120580 PtprtQ99M80 1454 aa15.15■□□□□ 0.02
Prpf39-201ENSMUST00000120580 Fgd6Q69ZL1 1399 aa15.15■□□□□ 0.02
Prpf39-201ENSMUST00000120580 NexmifQ5DTT1 1515 aa15.13■□□□□ 0.01
Prpf39-201ENSMUST00000120580 Pprc1Q6NZN1 1644 aa15.13■□□□□ 0.01
Prpf39-201ENSMUST00000120580 Gm32742A0A1B0GT42 1604 aa15.12■□□□□ 0.01
Prpf39-201ENSMUST00000120580 Setbp1Q9Z180 1582 aa15.12■□□□□ 0.01
Prpf39-201ENSMUST00000120580 Rnf17Q99MV7 1640 aa15.12■□□□□ 0.01
Prpf39-201ENSMUST00000120580 Ccdc141E9Q8Q6 1531 aa15.11■□□□□ 0.01
Prpf39-201ENSMUST00000120580 Cep170Q6A065 1588 aa15.11■□□□□ 0.01
Prpf39-201ENSMUST00000120580 Aebp1Q640N1 1128 aa15.1■□□□□ 0.01
Prpf39-201ENSMUST00000120580 Prex2Q3LAC4 1598 aa15.09■□□□□ 0.01
Prpf39-201ENSMUST00000120580 WrnO09053 1401 aa15.09■□□□□ 0.01
Prpf39-201ENSMUST00000120580 Adcy10Q8C0T9 1614 aa15.09■□□□□ 0.01
Prpf39-201ENSMUST00000120580 Mug1P28665 1476 aa15.09■□□□□ 0.01
Prpf39-201ENSMUST00000120580 Arhgef40Q3UPH7 1517 aa15.08■□□□□ 0
Prpf39-201ENSMUST00000120580 Npm2Q80W85 207 aa15.08■□□□□ 0
Prpf39-201ENSMUST00000120580 Lrrc9Q8CDN9 1456 aa15.07■□□□□ 0
Prpf39-201ENSMUST00000120580 Col17a1Q07563 1470 aa15.06■□□□□ 0
Prpf39-201ENSMUST00000120580 Abca9Q8K449 1623 aa15.05■□□□□ 0
Prpf39-201ENSMUST00000120580 Wdr7Q920I9 1489 aa15.04■□□□□ -0
Prpf39-201ENSMUST00000120580 SphkapQ6NSW3 1687 aa15.04■□□□□ -0
Prpf39-201ENSMUST00000120580 Kidins220E9Q9B7 1793 aa15.04■□□□□ -0
Prpf39-201ENSMUST00000120580 Kif21bQ9QXL1 1668 aa15.03■□□□□ -0
Prpf39-201ENSMUST00000120580 Fhod3Q76LL6 1578 aa15.03■□□□□ -0
Prpf39-201ENSMUST00000120580 Acin1Q9JIX8 1338 aaKnown RBP15.02■□□□□ -0
Prpf39-201ENSMUST00000120580 Kiaa0556Q8C753 1610 aa15.01□□□□□ -0.01
Prpf39-201ENSMUST00000120580 Arhgap31A6X8Z5 1425 aa15.01□□□□□ -0.01
Prpf39-201ENSMUST00000120580 Magi1Q6RHR9 1471 aa15.01□□□□□ -0.01
Prpf39-201ENSMUST00000120580 Znf608Q56A10 1511 aa15□□□□□ -0.01
Prpf39-201ENSMUST00000120580 Fancd2Q80V62 1450 aa15□□□□□ -0.01
Prpf39-201ENSMUST00000120580 Cdc42bpbQ7TT50 1713 aa15□□□□□ -0.01
Prpf39-201ENSMUST00000120580 A2mQ6GQT1 1474 aa14.98□□□□□ -0.01
Prpf39-201ENSMUST00000120580 Gapvd1Q6PAR5 1458 aa14.98□□□□□ -0.01
Prpf39-201ENSMUST00000120580 Gm14025A2AP89 1413 aa14.97□□□□□ -0.01
Prpf39-201ENSMUST00000120580 Abcc3B2RX12 1523 aa14.97□□□□□ -0.01
Prpf39-201ENSMUST00000120580 Zfyve16Q80U44 1528 aa14.97□□□□□ -0.01
Prpf39-201ENSMUST00000120580 Hecw1Q8K4P8 1604 aa14.96□□□□□ -0.01
Prpf39-201ENSMUST00000120580 Ak9G3UYQ4 1894 aa14.96□□□□□ -0.02
Prpf39-201ENSMUST00000120580 AI481877A2ALV5 1481 aa14.94□□□□□ -0.02
Prpf39-201ENSMUST00000120580 Mast1Q9R1L5 1570 aa14.94□□□□□ -0.02
Prpf39-201ENSMUST00000120580 Neurl4Q5NCX5 1563 aa14.93□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 33.9 ms