RNA–Protein interactions for RNA: ENSMUST00000117601.7

Limch1-203, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 5 BASIC

Gene Limch1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-203ENSMUST00000117601 Map3k1P53349 1493 aa12.47□□□□□ -0.41
Limch1-203ENSMUST00000117601 Plb1Q3TTY0 1478 aa12.45□□□□□ -0.42
Limch1-203ENSMUST00000117601 AqrQ8CFQ3 1481 aaKnown RBP12.45□□□□□ -0.42
Limch1-203ENSMUST00000117601 Cux1P53564 1515 aa12.44□□□□□ -0.42
Limch1-203ENSMUST00000117601 Crocc2F6XLV1 1638 aa12.44□□□□□ -0.42
Limch1-203ENSMUST00000117601 Carmil1Q6EDY6 1374 aa12.43□□□□□ -0.42
Limch1-203ENSMUST00000117601 Ankrd26Q811D2 1581 aa12.42□□□□□ -0.42
Limch1-203ENSMUST00000117601 BlmO88700 1416 aa12.41□□□□□ -0.42
Limch1-203ENSMUST00000117601 Arhgef5E9Q7D5 1581 aa12.4□□□□□ -0.42
Limch1-203ENSMUST00000117601 SynmQ70IV5 1561 aa12.39□□□□□ -0.43
Limch1-203ENSMUST00000117601 Urb2E9Q7L1 1524 aaKnown RBP12.39□□□□□ -0.43
Limch1-203ENSMUST00000117601 Pcf11G3X9Z4 1553 aa12.36□□□□□ -0.43
Limch1-203ENSMUST00000117601 NefmP08553 848 aa12.36□□□□□ -0.43
Limch1-203ENSMUST00000117601 Aebp1Q640N1 1128 aa12.36□□□□□ -0.43
Limch1-203ENSMUST00000117601 Naip1Q9QWK5 1403 aa12.36□□□□□ -0.43
Limch1-203ENSMUST00000117601 Supt5hO55201 1082 aaKnown RBP12.34□□□□□ -0.43
Limch1-203ENSMUST00000117601 Pla2r1Q62028 1487 aa12.34□□□□□ -0.43
Limch1-203ENSMUST00000117601 Disp1Q3TDN0 1521 aa12.33□□□□□ -0.44
Limch1-203ENSMUST00000117601 Slx4Q6P1D7 1565 aa12.32□□□□□ -0.44
Limch1-203ENSMUST00000117601 Magi3Q9EQJ9 1476 aa12.32□□□□□ -0.44
Limch1-203ENSMUST00000117601 Fam50aQ9WV03 339 aaKnown RBP12.31□□□□□ -0.44
Limch1-203ENSMUST00000117601 Rpap1Q80TE0 1409 aa12.31□□□□□ -0.44
Limch1-203ENSMUST00000117601 Grin2aP35436 1464 aa12.31□□□□□ -0.44
Limch1-203ENSMUST00000117601 EprsQ8CGC7 1512 aaKnown RBP12.31□□□□□ -0.44
Limch1-203ENSMUST00000117601 Tiam1Q60610 1591 aa12.31□□□□□ -0.44
Limch1-203ENSMUST00000117601 Eid3Q3V124 375 aa12.3□□□□□ -0.44
Limch1-203ENSMUST00000117601 Ncapd3Q6ZQK0 1506 aa12.29□□□□□ -0.44
Limch1-203ENSMUST00000117601 Erich3F6QRE9 1637 aa12.29□□□□□ -0.44
Limch1-203ENSMUST00000117601 Fyco1Q8VDC1 1437 aa12.28□□□□□ -0.44
Limch1-203ENSMUST00000117601 CadpsQ80TJ1 1355 aa12.28□□□□□ -0.44
Limch1-203ENSMUST00000117601 Arhgap27A2AB59 869 aa12.28□□□□□ -0.44
Limch1-203ENSMUST00000117601 Neurod1Q60867 357 aa12.28□□□□□ -0.44
Limch1-203ENSMUST00000117601 PrkcshO08795 521 aa12.27□□□□□ -0.44
Limch1-203ENSMUST00000117601 1700123L14RikQ3V2K7 440 aa12.26□□□□□ -0.45
Limch1-203ENSMUST00000117601 Lmo7E9PYF4 1699 aaKnown RBP12.26□□□□□ -0.45
Limch1-203ENSMUST00000117601 Ppargc1bQ8VHJ7 1014 aa12.26□□□□□ -0.45
Limch1-203ENSMUST00000117601 Lrriq1Q0P5X1 1673 aa12.25□□□□□ -0.45
Limch1-203ENSMUST00000117601 CntlnA2AM05 1397 aa12.25□□□□□ -0.45
Limch1-203ENSMUST00000117601 PxdnQ3UQ28 1475 aa12.25□□□□□ -0.45
Limch1-203ENSMUST00000117601 Setd1bQ8CFT2 1985 aa12.24□□□□□ -0.45
Limch1-203ENSMUST00000117601 WizO88286 1684 aaKnown RBP12.24□□□□□ -0.45
Limch1-203ENSMUST00000117601 Gm7298A0A0N4SVU1 1476 aa12.24□□□□□ -0.45
Limch1-203ENSMUST00000117601 Gpatch8A2A6A1 1505 aa12.21□□□□□ -0.46
Limch1-203ENSMUST00000117601 Fkbp15Q6P9Q6 1216 aaKnown RBP12.2□□□□□ -0.46
Limch1-203ENSMUST00000117601 Chic2Q9D9G3 165 aa12.19□□□□□ -0.46
Limch1-203ENSMUST00000117601 Aebp2Q9Z248 504 aaKnown RBP12.19□□□□□ -0.46
Limch1-203ENSMUST00000117601 Gm1043A0A140LJC2 1431 aa12.19□□□□□ -0.46
Limch1-203ENSMUST00000117601 Ift140E9PY46 1464 aa12.19□□□□□ -0.46
Limch1-203ENSMUST00000117601 Polr1aO35134 1717 aaKnown RBP12.19□□□□□ -0.46
Limch1-203ENSMUST00000117601 3425401B19RikD3Z1D3 1412 aa12.18□□□□□ -0.46
Limch1-203ENSMUST00000117601 WrnO09053 1401 aa12.18□□□□□ -0.46
Limch1-203ENSMUST00000117601 Kif27Q7M6Z4 1394 aa12.18□□□□□ -0.46
Limch1-203ENSMUST00000117601 Wdr66E9Q743 1299 aa12.17□□□□□ -0.46
Limch1-203ENSMUST00000117601 Nup160Q9Z0W3 1402 aaKnown RBP12.17□□□□□ -0.46
Limch1-203ENSMUST00000117601 Sall2Q9QX96 1004 aa12.15□□□□□ -0.46
Limch1-203ENSMUST00000117601 TonslQ6NZL6 1363 aa12.14□□□□□ -0.47
Limch1-203ENSMUST00000117601 Adamts12Q811B3 1600 aa12.13□□□□□ -0.47
Limch1-203ENSMUST00000117601 Ccnb3Q810T2 1396 aa12.13□□□□□ -0.47
Limch1-203ENSMUST00000117601 Ube2uB1AUC4 352 aa12.13□□□□□ -0.47
Limch1-203ENSMUST00000117601 Abca5Q8K448 1642 aa12.13□□□□□ -0.47
Limch1-203ENSMUST00000117601 Abca16E9PWJ7 1678 aa12.12□□□□□ -0.47
Limch1-203ENSMUST00000117601 Soga1E1U8D0 1418 aa12.12□□□□□ -0.47
Limch1-203ENSMUST00000117601 TchhA0A0B4J1F9 1599 aa12.11□□□□□ -0.47
Limch1-203ENSMUST00000117601 Cc2d2bA0A286YDU8 1405 aa12.08□□□□□ -0.48
Limch1-203ENSMUST00000117601 Kdm5bQ80Y84 1544 aa12.08□□□□□ -0.48
Limch1-203ENSMUST00000117601 BC005561E9Q5E2 1589 aa12.08□□□□□ -0.48
Limch1-203ENSMUST00000117601 Abcc2Q8VI47 1543 aa12.08□□□□□ -0.48
Limch1-203ENSMUST00000117601 AknaQ80VW7 1404 aa12.07□□□□□ -0.48
Limch1-203ENSMUST00000117601 Ncoa3O09000 1398 aa12.06□□□□□ -0.48
Limch1-203ENSMUST00000117601 Peg3Q3URU2 1571 aa12.05□□□□□ -0.48
Limch1-203ENSMUST00000117601 NexmifQ5DTT1 1515 aa12.05□□□□□ -0.48
Limch1-203ENSMUST00000117601 Shroom2A2ALU4 1481 aa12.05□□□□□ -0.48
Limch1-203ENSMUST00000117601 A2mQ6GQT1 1474 aa12.05□□□□□ -0.48
Limch1-203ENSMUST00000117601 Ifnlr1Q8CGK5 535 aa12.03□□□□□ -0.48
Limch1-203ENSMUST00000117601 Rusc2Q80U22 1514 aa12.03□□□□□ -0.48
Limch1-203ENSMUST00000117601 Arhgap31A6X8Z5 1425 aa12.03□□□□□ -0.48
Limch1-203ENSMUST00000117601 Cabp1Q9JLK7 227 aa12.02□□□□□ -0.49
Limch1-203ENSMUST00000117601 Neo1P97798 1493 aa12.02□□□□□ -0.49
Limch1-203ENSMUST00000117601 Pbrm1Q8BSQ9 1634 aaKnown RBP12.01□□□□□ -0.49
Limch1-203ENSMUST00000117601 Mug1P28665 1476 aa12.01□□□□□ -0.49
Limch1-203ENSMUST00000117601 Hspa5P20029 655 aaKnown RBP12□□□□□ -0.49
Limch1-203ENSMUST00000117601 Naip2Q9QUK4 1447 aa12□□□□□ -0.49
Limch1-203ENSMUST00000117601 Zfp644E9QA22 1323 aa11.98□□□□□ -0.49
Limch1-203ENSMUST00000117601 Jph4Q80WT0 628 aa11.98□□□□□ -0.49
Limch1-203ENSMUST00000117601 Lmtk2Q3TYD6 1471 aa11.98□□□□□ -0.49
Limch1-203ENSMUST00000117601 Eif4g3Q80XI3 1579 aaKnown RBP11.97□□□□□ -0.49
Limch1-203ENSMUST00000117601 Rapgef6Q5NCJ1 1609 aa11.96□□□□□ -0.49
Limch1-203ENSMUST00000117601 Arhgef40Q3UPH7 1517 aa11.96□□□□□ -0.49
Limch1-203ENSMUST00000117601 Mapk8ip2Q9ERE9 830 aa11.96□□□□□ -0.5
Limch1-203ENSMUST00000117601 Plppr3Q7TPB0 716 aa11.95□□□□□ -0.5
Limch1-203ENSMUST00000117601 Zbtb7cQ8VCZ7 619 aa11.94□□□□□ -0.5
Limch1-203ENSMUST00000117601 Fhad1A6PWD2 1420 aa11.94□□□□□ -0.5
Limch1-203ENSMUST00000117601 Pelp1Q9DBD5 1123 aaKnown RBP11.93□□□□□ -0.5
Limch1-203ENSMUST00000117601 Mia2Q91ZV0 1396 aa11.93□□□□□ -0.5
Limch1-203ENSMUST00000117601 Fgd6Q69ZL1 1399 aa11.93□□□□□ -0.5
Limch1-203ENSMUST00000117601 Kdm6bQ5NCY0 1641 aa11.92□□□□□ -0.5
Limch1-203ENSMUST00000117601 Arhgef11Q68FM7 1552 aa11.92□□□□□ -0.5
Limch1-203ENSMUST00000117601 Dennd4bQ3U1Y4 1499 aa11.92□□□□□ -0.5
Limch1-203ENSMUST00000117601 Zcchc11B2RX14 1644 aaKnown RBP11.91□□□□□ -0.5
Limch1-203ENSMUST00000117601 Prex2Q3LAC4 1598 aa11.91□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms