RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 UbtfP25976 765 aaKnown RBP39.36■■■■□ 3.89
Tpm1-216ENSMUST00000113707 Magi3Q9EQJ9 1476 aa39.34■■■■□ 3.89
Tpm1-216ENSMUST00000113707 Disp1Q3TDN0 1521 aa39.33■■■■□ 3.89
Tpm1-216ENSMUST00000113707 Pla2r1Q62028 1487 aa39.33■■■■□ 3.89
Tpm1-216ENSMUST00000113707 Plekhg3Q4VAC9 1341 aa39.33■■■■□ 3.89
Tpm1-216ENSMUST00000113707 Rpap1Q80TE0 1409 aa39.32■■■■□ 3.89
Tpm1-216ENSMUST00000113707 Mier1Q5UAK0 511 aa39.31■■■■□ 3.88
Tpm1-216ENSMUST00000113707 Lrriq1Q0P5X1 1673 aa39.31■■■■□ 3.88
Tpm1-216ENSMUST00000113707 Ift140E9PY46 1464 aa39.3■■■■□ 3.88
Tpm1-216ENSMUST00000113707 Fyco1Q8VDC1 1437 aa39.29■■■■□ 3.88
Tpm1-216ENSMUST00000113707 Grin2aP35436 1464 aa39.26■■■■□ 3.88
Tpm1-216ENSMUST00000113707 Ap3b1Q9Z1T1 1105 aa39.26■■■■□ 3.88
Tpm1-216ENSMUST00000113707 Lmo7E9PYF4 1699 aaKnown RBP39.26■■■■□ 3.88
Tpm1-216ENSMUST00000113707 Pcf11G3X9Z4 1553 aa39.24■■■■□ 3.87
Tpm1-216ENSMUST00000113707 Tiam1Q60610 1591 aa39.24■■■■□ 3.87
Tpm1-216ENSMUST00000113707 EprsQ8CGC7 1512 aaKnown RBP39.21■■■■□ 3.87
Tpm1-216ENSMUST00000113707 Pbrm1Q8BSQ9 1634 aaKnown RBP39.21■■■■□ 3.87
Tpm1-216ENSMUST00000113707 Gpatch8A2A6A1 1505 aa39.15■■■■□ 3.86
Tpm1-216ENSMUST00000113707 Naip1Q9QWK5 1403 aa39.12■■■■□ 3.85
Tpm1-216ENSMUST00000113707 Nup160Q9Z0W3 1402 aaKnown RBP39.1■■■■□ 3.85
Tpm1-216ENSMUST00000113707 Setd1bQ8CFT2 1985 aa39.1■■■■□ 3.85
Tpm1-216ENSMUST00000113707 CntlnA2AM05 1397 aa39.09■■■■□ 3.85
Tpm1-216ENSMUST00000113707 Adamts12Q811B3 1600 aa39.01■■■■□ 3.83
Tpm1-216ENSMUST00000113707 CadpsQ80TJ1 1355 aa38.99■■■■□ 3.83
Tpm1-216ENSMUST00000113707 Slx4Q6P1D7 1565 aa38.99■■■■□ 3.83
Tpm1-216ENSMUST00000113707 Abca5Q8K448 1642 aa38.98■■■■□ 3.83
Tpm1-216ENSMUST00000113707 Peg3Q3URU2 1571 aa38.98■■■■□ 3.83
Tpm1-216ENSMUST00000113707 Gm7298A0A0N4SVU1 1476 aa38.96■■■■□ 3.83
Tpm1-216ENSMUST00000113707 BlmO88700 1416 aa38.95■■■■□ 3.83
Tpm1-216ENSMUST00000113707 WizO88286 1684 aaKnown RBP38.95■■■■□ 3.83
Tpm1-216ENSMUST00000113707 NefmP08553 848 aa38.94■■■■□ 3.82
Tpm1-216ENSMUST00000113707 Aebp1Q640N1 1128 aa38.94■■■■□ 3.82
Tpm1-216ENSMUST00000113707 Cc2d2bA0A286YDU8 1405 aa38.91■■■■□ 3.82
Tpm1-216ENSMUST00000113707 Ncapd3Q6ZQK0 1506 aa38.89■■■■□ 3.82
Tpm1-216ENSMUST00000113707 TchhA0A0B4J1F9 1599 aa38.87■■■■□ 3.81
Tpm1-216ENSMUST00000113707 Soga1E1U8D0 1418 aa38.83■■■■□ 3.81
Tpm1-216ENSMUST00000113707 Abca16E9PWJ7 1678 aa38.8■■■■□ 3.8
Tpm1-216ENSMUST00000113707 PxdnQ3UQ28 1475 aa38.77■■■■□ 3.8
Tpm1-216ENSMUST00000113707 Eif4g3Q80XI3 1579 aaKnown RBP38.76■■■■□ 3.8
Tpm1-216ENSMUST00000113707 Rusc2Q80U22 1514 aa38.73■■■■□ 3.79
Tpm1-216ENSMUST00000113707 Gm1043A0A140LJC2 1431 aa38.69■■■■□ 3.78
Tpm1-216ENSMUST00000113707 Lmod2Q3UHZ5 550 aa38.66■■■■□ 3.78
Tpm1-216ENSMUST00000113707 Kif27Q7M6Z4 1394 aa38.58■■■■□ 3.77
Tpm1-216ENSMUST00000113707 Abcc2Q8VI47 1543 aa38.57■■■■□ 3.77
Tpm1-216ENSMUST00000113707 Arhgap27A2AB59 869 aa38.51■■■■□ 3.76
Tpm1-216ENSMUST00000113707 WrnO09053 1401 aa38.49■■■■□ 3.75
Tpm1-216ENSMUST00000113707 Shroom2A2ALU4 1481 aa38.44■■■■□ 3.74
Tpm1-216ENSMUST00000113707 Lmtk2Q3TYD6 1471 aa38.37■■■■□ 3.73
Tpm1-216ENSMUST00000113707 Map3k4O08648 1597 aa38.36■■■■□ 3.73
Tpm1-216ENSMUST00000113707 3425401B19RikD3Z1D3 1412 aa38.35■■■■□ 3.73
Tpm1-216ENSMUST00000113707 Kdm5bQ80Y84 1544 aa38.32■■■■□ 3.73
Tpm1-216ENSMUST00000113707 Rapgef6Q5NCJ1 1609 aa38.32■■■■□ 3.72
Tpm1-216ENSMUST00000113707 Dnmt1P13864 1620 aaKnown RBP38.28■■■■□ 3.72
Tpm1-216ENSMUST00000113707 BC005561E9Q5E2 1589 aa38.27■■■■□ 3.72
Tpm1-216ENSMUST00000113707 Ccnb3Q810T2 1396 aa38.24■■■■□ 3.71
Tpm1-216ENSMUST00000113707 NexmifQ5DTT1 1515 aa38.23■■■■□ 3.71
Tpm1-216ENSMUST00000113707 Gcc2Q8CHG3 1679 aa38.21■■■■□ 3.71
Tpm1-216ENSMUST00000113707 Fgd6Q69ZL1 1399 aa38.19■■■■□ 3.7
Tpm1-216ENSMUST00000113707 Mug1P28665 1476 aa38.17■■■■□ 3.7
Tpm1-216ENSMUST00000113707 Arhgef11Q68FM7 1552 aa38.13■■■■□ 3.69
Tpm1-216ENSMUST00000113707 Ncoa3O09000 1398 aa38.12■■■■□ 3.69
Tpm1-216ENSMUST00000113707 Arhgap31A6X8Z5 1425 aa38.11■■■■□ 3.69
Tpm1-216ENSMUST00000113707 Ncoa2Q61026 1462 aa38.1■■■■□ 3.69
Tpm1-216ENSMUST00000113707 Fam50aQ9WV03 339 aaKnown RBP38.1■■■■□ 3.69
Tpm1-216ENSMUST00000113707 Mia2Q91ZV0 1396 aa38.1■■■■□ 3.69
Tpm1-216ENSMUST00000113707 Neo1P97798 1493 aa38.08■■■■□ 3.69
Tpm1-216ENSMUST00000113707 Naip2Q9QUK4 1447 aa38.06■■■■□ 3.68
Tpm1-216ENSMUST00000113707 A2mQ6GQT1 1474 aa38.05■■■■□ 3.68
Tpm1-216ENSMUST00000113707 Ccdc141E9Q8Q6 1531 aa38.05■■■■□ 3.68
Tpm1-216ENSMUST00000113707 Fhad1A6PWD2 1420 aa38.04■■■■□ 3.68
Tpm1-216ENSMUST00000113707 Zcchc11B2RX14 1644 aaKnown RBP38.04■■■■□ 3.68
Tpm1-216ENSMUST00000113707 AknaQ80VW7 1404 aa38.01■■■■□ 3.68
Tpm1-216ENSMUST00000113707 Jph4Q80WT0 628 aa38■■■■□ 3.67
Tpm1-216ENSMUST00000113707 Cdc42bpaQ3UU96 1719 aa37.99■■■■□ 3.67
Tpm1-216ENSMUST00000113707 Dhx57Q6P5D3 1388 aaKnown RBP37.98■■■■□ 3.67
Tpm1-216ENSMUST00000113707 Arhgef12Q8R4H2 1543 aaKnown RBP37.98■■■■□ 3.67
Tpm1-216ENSMUST00000113707 Rrbp1Q99PL5 1605 aaKnown RBP37.98■■■■□ 3.67
Tpm1-216ENSMUST00000113707 Kiaa1551Q5DTW7 1521 aa37.98■■■■□ 3.67
Tpm1-216ENSMUST00000113707 Vps8Q0P5W1 1427 aa37.96■■■■□ 3.67
Tpm1-216ENSMUST00000113707 Magi1Q6RHR9 1471 aa37.94■■■■□ 3.66
Tpm1-216ENSMUST00000113707 Las1lA2BE28 776 aaKnown RBP37.92■■■■□ 3.66
Tpm1-216ENSMUST00000113707 Mroh2aD3Z750 1679 aa37.9■■■■□ 3.66
Tpm1-216ENSMUST00000113707 TonslQ6NZL6 1363 aa37.9■■■■□ 3.66
Tpm1-216ENSMUST00000113707 Fam163aQ8CAA5 168 aa37.89■■■■□ 3.66
Tpm1-216ENSMUST00000113707 UacaQ8CGB3 1411 aa37.85■■■■□ 3.65
Tpm1-216ENSMUST00000113707 Ccer2J3QPU5 274 aa37.85■■■■□ 3.65
Tpm1-216ENSMUST00000113707 Mapkbp1Q6NS57 1503 aa37.84■■■■□ 3.65
Tpm1-216ENSMUST00000113707 Gm14025A2AP89 1413 aa37.81■■■■□ 3.64
Tpm1-216ENSMUST00000113707 Arhgef40Q3UPH7 1517 aa37.76■■■■□ 3.63
Tpm1-216ENSMUST00000113707 Adcy10Q8C0T9 1614 aa37.75■■■■□ 3.63
Tpm1-216ENSMUST00000113707 Prex2Q3LAC4 1598 aa37.75■■■■□ 3.63
Tpm1-216ENSMUST00000113707 Abcc1O35379 1528 aa37.74■■■■□ 3.63
Tpm1-216ENSMUST00000113707 Pcgf6Q99NA9 353 aa37.74■■■■□ 3.63
Tpm1-216ENSMUST00000113707 Rfx7F8VPJ6 1459 aa37.7■■■■□ 3.63
Tpm1-216ENSMUST00000113707 Chic2Q9D9G3 165 aa37.7■■■■□ 3.63
Tpm1-216ENSMUST00000113707 Fancd2Q80V62 1450 aa37.69■■■■□ 3.62
Tpm1-216ENSMUST00000113707 Abcc5Q9R1X5 1436 aa37.69■■■■□ 3.62
Tpm1-216ENSMUST00000113707 Plekhh2Q8C115 1491 aa37.68■■■■□ 3.62
Tpm1-216ENSMUST00000113707 Chd1P40201 1711 aa37.68■■■■□ 3.62
Tpm1-216ENSMUST00000113707 Eid3Q3V124 375 aa37.66■■■■□ 3.62
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms