RNA–Protein interactions for RNA: ENSMUST00000112577.7

Pkp4-203, Transcript of Plakophilin-4, mousemouse

TSL 5 BASIC

Gene Pkp4, Length 4,222 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-203ENSMUST00000112577 LrpprcQ6PB66 1392 aaKnown RBP12.1□□□□□ -0.47
Pkp4-203ENSMUST00000112577 Aebp1Q640N1 1128 aa12.1□□□□□ -0.47
Pkp4-203ENSMUST00000112577 CntlnA2AM05 1397 aa12.09□□□□□ -0.47
Pkp4-203ENSMUST00000112577 Frmpd1A2AKB4 1549 aa12.07□□□□□ -0.48
Pkp4-203ENSMUST00000112577 Hnrnpul2Q00PI9 745 aaKnown RBP12.07□□□□□ -0.48
Pkp4-203ENSMUST00000112577 Eif5bQ05D44 1216 aaKnown RBP12.06□□□□□ -0.48
Pkp4-203ENSMUST00000112577 Os9Q8K2C7 672 aa12.06□□□□□ -0.48
Pkp4-203ENSMUST00000112577 Shroom4Q1W617 1475 aa12.05□□□□□ -0.48
Pkp4-203ENSMUST00000112577 Fyco1Q8VDC1 1437 aa12.05□□□□□ -0.48
Pkp4-203ENSMUST00000112577 Arhgap27A2AB59 869 aa12.04□□□□□ -0.48
Pkp4-203ENSMUST00000112577 Kif27Q7M6Z4 1394 aa12.03□□□□□ -0.48
Pkp4-203ENSMUST00000112577 NrkQ9R0G8 1455 aa12.02□□□□□ -0.49
Pkp4-203ENSMUST00000112577 Arhgap35Q91YM2 1499 aa12.02□□□□□ -0.49
Pkp4-203ENSMUST00000112577 Efcab5A0JP43 1406 aa12□□□□□ -0.49
Pkp4-203ENSMUST00000112577 Dhx29Q6PGC1 1365 aaKnown RBP12□□□□□ -0.49
Pkp4-203ENSMUST00000112577 Ifnlr1Q8CGK5 535 aa12□□□□□ -0.49
Pkp4-203ENSMUST00000112577 Csrnp3P59055 597 aa11.99□□□□□ -0.49
Pkp4-203ENSMUST00000112577 Hdac5Q9Z2V6 1113 aa11.99□□□□□ -0.49
Pkp4-203ENSMUST00000112577 Clstn2Q9ER65 966 aa11.98□□□□□ -0.49
Pkp4-203ENSMUST00000112577 Wdr62Q3U3T8 1523 aa11.98□□□□□ -0.49
Pkp4-203ENSMUST00000112577 Rpap1Q80TE0 1409 aa11.96□□□□□ -0.49
Pkp4-203ENSMUST00000112577 Hspa5P20029 655 aaKnown RBP11.96□□□□□ -0.5
Pkp4-203ENSMUST00000112577 Map3k1P53349 1493 aa11.95□□□□□ -0.5
Pkp4-203ENSMUST00000112577 PtprkP35822 1457 aa11.95□□□□□ -0.5
Pkp4-203ENSMUST00000112577 Mtus2Q3UHD3 1353 aa11.95□□□□□ -0.5
Pkp4-203ENSMUST00000112577 Grin2bQ01097 1482 aa11.94□□□□□ -0.5
Pkp4-203ENSMUST00000112577 Aplp2Q06335 707 aa11.92□□□□□ -0.5
Pkp4-203ENSMUST00000112577 Gm13697A2AK42 830 aa11.92□□□□□ -0.5
Pkp4-203ENSMUST00000112577 NeflP08551 543 aa11.92□□□□□ -0.5
Pkp4-203ENSMUST00000112577 Erich6D3Z6S9 713 aa11.91□□□□□ -0.5
Pkp4-203ENSMUST00000112577 Lamc3Q9R0B6 1581 aa11.9□□□□□ -0.5
Pkp4-203ENSMUST00000112577 Arap1Q4LDD4 1452 aa11.9□□□□□ -0.5
Pkp4-203ENSMUST00000112577 Zbtb4Q5F293 982 aa11.9□□□□□ -0.5
Pkp4-203ENSMUST00000112577 Mroh2bQ7M6Y6 1581 aa11.9□□□□□ -0.5
Pkp4-203ENSMUST00000112577 Myt1Q8CFC2 1127 aa11.9□□□□□ -0.5
Pkp4-203ENSMUST00000112577 Rgl3Q3UYI5 709 aa11.89□□□□□ -0.51
Pkp4-203ENSMUST00000112577 Duox2A2AQ99 1517 aa11.89□□□□□ -0.51
Pkp4-203ENSMUST00000112577 Mrs2Q5NCE8 434 aa11.89□□□□□ -0.51
Pkp4-203ENSMUST00000112577 Camsap1A2AHC3 1581 aa11.88□□□□□ -0.51
Pkp4-203ENSMUST00000112577 Naip1Q9QWK5 1403 aa11.88□□□□□ -0.51
Pkp4-203ENSMUST00000112577 PogzQ8BZH4 1409 aaKnown RBP11.87□□□□□ -0.51
Pkp4-203ENSMUST00000112577 Cabp1Q9JLK7 227 aa11.86□□□□□ -0.51
Pkp4-203ENSMUST00000112577 Ccnb3Q810T2 1396 aa11.86□□□□□ -0.51
Pkp4-203ENSMUST00000112577 Arhgef5E9Q7D5 1581 aa11.86□□□□□ -0.51
Pkp4-203ENSMUST00000112577 Anp32aO35381 247 aa11.85□□□□□ -0.51
Pkp4-203ENSMUST00000112577 Ncapd3Q6ZQK0 1506 aa11.85□□□□□ -0.51
Pkp4-203ENSMUST00000112577 Polr1aO35134 1717 aaKnown RBP11.84□□□□□ -0.51
Pkp4-203ENSMUST00000112577 Mphosph9A6H5Y1 991 aa11.84□□□□□ -0.51
Pkp4-203ENSMUST00000112577 Pkd2O35245 966 aa11.84□□□□□ -0.51
Pkp4-203ENSMUST00000112577 UacaQ8CGB3 1411 aa11.82□□□□□ -0.52
Pkp4-203ENSMUST00000112577 Cwc22Q8C5N3 908 aaKnown RBP11.82□□□□□ -0.52
Pkp4-203ENSMUST00000112577 Gm38655A0A286YDK6 273 aa11.81□□□□□ -0.52
Pkp4-203ENSMUST00000112577 Rad54l2Q99NG0 1466 aa11.81□□□□□ -0.52
Pkp4-203ENSMUST00000112577 Calr4Q3TQS0 420 aa11.81□□□□□ -0.52
Pkp4-203ENSMUST00000112577 Rrp7aQ9D1C9 280 aaKnown RBP11.8□□□□□ -0.52
Pkp4-203ENSMUST00000112577 Dhx57Q6P5D3 1388 aaKnown RBP11.79□□□□□ -0.52
Pkp4-203ENSMUST00000112577 Fhad1A6PWD2 1420 aa11.79□□□□□ -0.52
Pkp4-203ENSMUST00000112577 Tiam1Q60610 1591 aa11.79□□□□□ -0.52
Pkp4-203ENSMUST00000112577 Cux1P53564 1515 aa11.79□□□□□ -0.52
Pkp4-203ENSMUST00000112577 Grwd1Q810D6 446 aaKnown RBP11.78□□□□□ -0.52
Pkp4-203ENSMUST00000112577 Card11Q8CIS0 1159 aa11.78□□□□□ -0.52
Pkp4-203ENSMUST00000112577 WrnO09053 1401 aa11.78□□□□□ -0.52
Pkp4-203ENSMUST00000112577 Plekhh2Q8C115 1491 aa11.77□□□□□ -0.53
Pkp4-203ENSMUST00000112577 AqrQ8CFQ3 1481 aaKnown RBP11.77□□□□□ -0.53
Pkp4-203ENSMUST00000112577 TnnQ80Z71 1560 aa11.76□□□□□ -0.53
Pkp4-203ENSMUST00000112577 1700123L14RikQ3V2K7 440 aa11.75□□□□□ -0.53
Pkp4-203ENSMUST00000112577 Map4P27546 1125 aaKnown RBP11.75□□□□□ -0.53
Pkp4-203ENSMUST00000112577 Sin3aQ60520 1274 aaKnown RBP11.75□□□□□ -0.53
Pkp4-203ENSMUST00000112577 Ankrd36D3Z4K0 1415 aa11.75□□□□□ -0.53
Pkp4-203ENSMUST00000112577 AknaQ80VW7 1404 aa11.75□□□□□ -0.53
Pkp4-203ENSMUST00000112577 Rtl5Q5DTT4 599 aa11.74□□□□□ -0.53
Pkp4-203ENSMUST00000112577 Mrc2Q64449 1479 aa11.73□□□□□ -0.53
Pkp4-203ENSMUST00000112577 Nlrp6Q91WS2 869 aa11.73□□□□□ -0.53
Pkp4-203ENSMUST00000112577 Vps8Q0P5W1 1427 aa11.73□□□□□ -0.53
Pkp4-203ENSMUST00000112577 Trak1Q6PD31 939 aa11.72□□□□□ -0.53
Pkp4-203ENSMUST00000112577 Mroh3A0A1D5RM54 893 aa11.71□□□□□ -0.54
Pkp4-203ENSMUST00000112577 Upf2A2AT37 1269 aaKnown RBP11.7□□□□□ -0.54
Pkp4-203ENSMUST00000112577 Urb2E9Q7L1 1524 aaKnown RBP11.7□□□□□ -0.54
Pkp4-203ENSMUST00000112577 Atp1b4Q99ME6 356 aa11.7□□□□□ -0.54
Pkp4-203ENSMUST00000112577 EprsQ8CGC7 1512 aaKnown RBP11.69□□□□□ -0.54
Pkp4-203ENSMUST00000112577 Gm7298A0A0N4SVU1 1476 aa11.69□□□□□ -0.54
Pkp4-203ENSMUST00000112577 SynmQ70IV5 1561 aa11.68□□□□□ -0.54
Pkp4-203ENSMUST00000112577 Rundc1Q0VDN7 615 aa11.68□□□□□ -0.54
Pkp4-203ENSMUST00000112577 CadpsQ80TJ1 1355 aa11.67□□□□□ -0.54
Pkp4-203ENSMUST00000112577 Prdm10Q3UTQ7 1184 aa11.67□□□□□ -0.54
Pkp4-203ENSMUST00000112577 Pcf11G3X9Z4 1553 aa11.67□□□□□ -0.54
Pkp4-203ENSMUST00000112577 Nup155Q99P88 1391 aaKnown RBP11.66□□□□□ -0.54
Pkp4-203ENSMUST00000112577 Wwc2Q6NXJ0 1187 aa11.66□□□□□ -0.54
Pkp4-203ENSMUST00000112577 Usp47Q8BY87 1376 aa11.65□□□□□ -0.54
Pkp4-203ENSMUST00000112577 Ppp4r2Q0VGB7 417 aa11.65□□□□□ -0.54
Pkp4-203ENSMUST00000112577 Wdr43Q6ZQL4 677 aaKnown RBP11.65□□□□□ -0.54
Pkp4-203ENSMUST00000112577 Kdm2aP59997 1161 aa11.65□□□□□ -0.54
Pkp4-203ENSMUST00000112577 Ofd1Q80Z25 1017 aa11.65□□□□□ -0.54
Pkp4-203ENSMUST00000112577 Crocc2F6XLV1 1638 aa11.64□□□□□ -0.55
Pkp4-203ENSMUST00000112577 Cc2d2bA0A286YDU8 1405 aa11.64□□□□□ -0.55
Pkp4-203ENSMUST00000112577 Ncoa2Q61026 1462 aa11.64□□□□□ -0.55
Pkp4-203ENSMUST00000112577 Jph4Q80WT0 628 aa11.64□□□□□ -0.55
Pkp4-203ENSMUST00000112577 Ankrd26Q811D2 1581 aa11.63□□□□□ -0.55
Pkp4-203ENSMUST00000112577 Plb1Q3TTY0 1478 aa11.63□□□□□ -0.55
Pkp4-203ENSMUST00000112577 Rad21Q61550 635 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms