RNA–Protein interactions for RNA: ENSMUST00000111042.2

Bdnf-202, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 3,905 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-202ENSMUST00000111042 Csrnp3P59055 597 aa11.77□□□□□ -0.52
Bdnf-202ENSMUST00000111042 Carmil1Q6EDY6 1374 aa11.77□□□□□ -0.53
Bdnf-202ENSMUST00000111042 Zbtb7cQ8VCZ7 619 aa11.77□□□□□ -0.53
Bdnf-202ENSMUST00000111042 NrkQ9R0G8 1455 aa11.75□□□□□ -0.53
Bdnf-202ENSMUST00000111042 Tnnt3Q9QZ47 272 aa11.75□□□□□ -0.53
Bdnf-202ENSMUST00000111042 Arap1Q4LDD4 1452 aa11.75□□□□□ -0.53
Bdnf-202ENSMUST00000111042 CntlnA2AM05 1397 aa11.74□□□□□ -0.53
Bdnf-202ENSMUST00000111042 Grin2bQ01097 1482 aa11.72□□□□□ -0.53
Bdnf-202ENSMUST00000111042 Dhx29Q6PGC1 1365 aaKnown RBP11.72□□□□□ -0.53
Bdnf-202ENSMUST00000111042 Lamc3Q9R0B6 1581 aa11.72□□□□□ -0.53
Bdnf-202ENSMUST00000111042 Hspa5P20029 655 aaKnown RBP11.71□□□□□ -0.53
Bdnf-202ENSMUST00000111042 Camsap1A2AHC3 1581 aa11.71□□□□□ -0.54
Bdnf-202ENSMUST00000111042 Arhgap27A2AB59 869 aa11.7□□□□□ -0.54
Bdnf-202ENSMUST00000111042 Fyco1Q8VDC1 1437 aa11.7□□□□□ -0.54
Bdnf-202ENSMUST00000111042 NrdcQ8BHG1 1161 aa11.7□□□□□ -0.54
Bdnf-202ENSMUST00000111042 Efcab5A0JP43 1406 aa11.69□□□□□ -0.54
Bdnf-202ENSMUST00000111042 Mia2Q91ZV0 1396 aa11.69□□□□□ -0.54
Bdnf-202ENSMUST00000111042 Ncapd3Q6ZQK0 1506 aa11.68□□□□□ -0.54
Bdnf-202ENSMUST00000111042 Mroh2bQ7M6Y6 1581 aa11.68□□□□□ -0.54
Bdnf-202ENSMUST00000111042 Kif27Q7M6Z4 1394 aa11.68□□□□□ -0.54
Bdnf-202ENSMUST00000111042 Gm38655A0A286YDK6 273 aa11.68□□□□□ -0.54
Bdnf-202ENSMUST00000111042 Map3k1P53349 1493 aa11.68□□□□□ -0.54
Bdnf-202ENSMUST00000111042 Eif5bQ05D44 1216 aaKnown RBP11.67□□□□□ -0.54
Bdnf-202ENSMUST00000111042 Rpap1Q80TE0 1409 aa11.66□□□□□ -0.54
Bdnf-202ENSMUST00000111042 Naip1Q9QWK5 1403 aa11.66□□□□□ -0.54
Bdnf-202ENSMUST00000111042 Arhgef5E9Q7D5 1581 aa11.66□□□□□ -0.54
Bdnf-202ENSMUST00000111042 Duox2A2AQ99 1517 aa11.65□□□□□ -0.54
Bdnf-202ENSMUST00000111042 Ifnlr1Q8CGK5 535 aa11.64□□□□□ -0.55
Bdnf-202ENSMUST00000111042 TnnQ80Z71 1560 aa11.63□□□□□ -0.55
Bdnf-202ENSMUST00000111042 Hnrnpul2Q00PI9 745 aaKnown RBP11.63□□□□□ -0.55
Bdnf-202ENSMUST00000111042 Rad54l2Q99NG0 1466 aa11.63□□□□□ -0.55
Bdnf-202ENSMUST00000111042 PogzQ8BZH4 1409 aaKnown RBP11.62□□□□□ -0.55
Bdnf-202ENSMUST00000111042 Zbtb4Q5F293 982 aa11.6□□□□□ -0.55
Bdnf-202ENSMUST00000111042 Ccnb3Q810T2 1396 aa11.59□□□□□ -0.55
Bdnf-202ENSMUST00000111042 Tiam1Q60610 1591 aa11.59□□□□□ -0.55
Bdnf-202ENSMUST00000111042 Cabp1Q9JLK7 227 aa11.58□□□□□ -0.56
Bdnf-202ENSMUST00000111042 Rgl3Q3UYI5 709 aa11.55□□□□□ -0.56
Bdnf-202ENSMUST00000111042 1700123L14RikQ3V2K7 440 aa11.55□□□□□ -0.56
Bdnf-202ENSMUST00000111042 AqrQ8CFQ3 1481 aaKnown RBP11.55□□□□□ -0.56
Bdnf-202ENSMUST00000111042 Mtus2Q3UHD3 1353 aa11.55□□□□□ -0.56
Bdnf-202ENSMUST00000111042 Gm13697A2AK42 830 aa11.55□□□□□ -0.56
Bdnf-202ENSMUST00000111042 Sin3aQ60520 1274 aaKnown RBP11.55□□□□□ -0.56
Bdnf-202ENSMUST00000111042 Os9Q8K2C7 672 aa11.54□□□□□ -0.56
Bdnf-202ENSMUST00000111042 Aplp2Q06335 707 aa11.54□□□□□ -0.56
Bdnf-202ENSMUST00000111042 Anp32bQ9EST5 272 aaKnown RBP11.54□□□□□ -0.56
Bdnf-202ENSMUST00000111042 Mphosph9A6H5Y1 991 aa11.53□□□□□ -0.56
Bdnf-202ENSMUST00000111042 Mrs2Q5NCE8 434 aa11.52□□□□□ -0.56
Bdnf-202ENSMUST00000111042 Pkd2O35245 966 aa11.52□□□□□ -0.57
Bdnf-202ENSMUST00000111042 Pcf11G3X9Z4 1553 aa11.51□□□□□ -0.57
Bdnf-202ENSMUST00000111042 Cux1P53564 1515 aa11.51□□□□□ -0.57
Bdnf-202ENSMUST00000111042 Erich6D3Z6S9 713 aa11.5□□□□□ -0.57
Bdnf-202ENSMUST00000111042 Polr1aO35134 1717 aaKnown RBP11.5□□□□□ -0.57
Bdnf-202ENSMUST00000111042 WrnO09053 1401 aa11.5□□□□□ -0.57
Bdnf-202ENSMUST00000111042 Ankrd26Q811D2 1581 aa11.49□□□□□ -0.57
Bdnf-202ENSMUST00000111042 Pelp1Q9DBD5 1123 aaKnown RBP11.49□□□□□ -0.57
Bdnf-202ENSMUST00000111042 Fhad1A6PWD2 1420 aa11.49□□□□□ -0.57
Bdnf-202ENSMUST00000111042 Eif4g1Q6NZJ6 1600 aaKnown RBP11.48□□□□□ -0.57
Bdnf-202ENSMUST00000111042 Grwd1Q810D6 446 aaKnown RBP11.47□□□□□ -0.57
Bdnf-202ENSMUST00000111042 Mrc2Q64449 1479 aa11.46□□□□□ -0.58
Bdnf-202ENSMUST00000111042 SynmQ70IV5 1561 aa11.46□□□□□ -0.58
Bdnf-202ENSMUST00000111042 EprsQ8CGC7 1512 aaKnown RBP11.46□□□□□ -0.58
Bdnf-202ENSMUST00000111042 UacaQ8CGB3 1411 aa11.45□□□□□ -0.58
Bdnf-202ENSMUST00000111042 Urb2E9Q7L1 1524 aaKnown RBP11.45□□□□□ -0.58
Bdnf-202ENSMUST00000111042 Slx4Q6P1D7 1565 aa11.45□□□□□ -0.58
Bdnf-202ENSMUST00000111042 Gm7298A0A0N4SVU1 1476 aa11.44□□□□□ -0.58
Bdnf-202ENSMUST00000111042 Clstn2Q9ER65 966 aa11.44□□□□□ -0.58
Bdnf-202ENSMUST00000111042 CadpsQ80TJ1 1355 aa11.44□□□□□ -0.58
Bdnf-202ENSMUST00000111042 Rrp7aQ9D1C9 280 aaKnown RBP11.43□□□□□ -0.58
Bdnf-202ENSMUST00000111042 Vps8Q0P5W1 1427 aa11.43□□□□□ -0.58
Bdnf-202ENSMUST00000111042 Calr4Q3TQS0 420 aa11.43□□□□□ -0.58
Bdnf-202ENSMUST00000111042 Plekhh2Q8C115 1491 aa11.42□□□□□ -0.58
Bdnf-202ENSMUST00000111042 Plb1Q3TTY0 1478 aa11.42□□□□□ -0.58
Bdnf-202ENSMUST00000111042 Trak1Q6PD31 939 aa11.41□□□□□ -0.58
Bdnf-202ENSMUST00000111042 AknaQ80VW7 1404 aa11.41□□□□□ -0.58
Bdnf-202ENSMUST00000111042 Crocc2F6XLV1 1638 aa11.41□□□□□ -0.58
Bdnf-202ENSMUST00000111042 Dnajc5bQ9CQ94 199 aa11.41□□□□□ -0.58
Bdnf-202ENSMUST00000111042 Ankrd36D3Z4K0 1415 aa11.41□□□□□ -0.58
Bdnf-202ENSMUST00000111042 Card11Q8CIS0 1159 aa11.4□□□□□ -0.58
Bdnf-202ENSMUST00000111042 SafbD3YXK2 937 aaKnown RBP11.39□□□□□ -0.59
Bdnf-202ENSMUST00000111042 Anp32aO35381 247 aa11.39□□□□□ -0.59
Bdnf-202ENSMUST00000111042 Map4P27546 1125 aaKnown RBP11.39□□□□□ -0.59
Bdnf-202ENSMUST00000111042 Zfp644E9QA22 1323 aa11.39□□□□□ -0.59
Bdnf-202ENSMUST00000111042 Wwc2Q6NXJ0 1187 aa11.38□□□□□ -0.59
Bdnf-202ENSMUST00000111042 3425401B19RikD3Z1D3 1412 aa11.38□□□□□ -0.59
Bdnf-202ENSMUST00000111042 Usp47Q8BY87 1376 aa11.36□□□□□ -0.59
Bdnf-202ENSMUST00000111042 Samd9lQ69Z37 1561 aa11.36□□□□□ -0.59
Bdnf-202ENSMUST00000111042 Unc13aQ4KUS2 1712 aa11.36□□□□□ -0.59
Bdnf-202ENSMUST00000111042 Naip2Q9QUK4 1447 aa11.36□□□□□ -0.59
Bdnf-202ENSMUST00000111042 Cwc22Q8C5N3 908 aaKnown RBP11.35□□□□□ -0.59
Bdnf-202ENSMUST00000111042 Dhx57Q6P5D3 1388 aaKnown RBP11.35□□□□□ -0.59
Bdnf-202ENSMUST00000111042 Fam135aQ6NS59 1506 aa11.35□□□□□ -0.59
Bdnf-202ENSMUST00000111042 Thoc2B1AZI6 1594 aaKnown RBP11.35□□□□□ -0.59
Bdnf-202ENSMUST00000111042 Rundc1Q0VDN7 615 aa11.35□□□□□ -0.59
Bdnf-202ENSMUST00000111042 A2mQ6GQT1 1474 aa11.34□□□□□ -0.59
Bdnf-202ENSMUST00000111042 Prdm10Q3UTQ7 1184 aa11.34□□□□□ -0.59
Bdnf-202ENSMUST00000111042 Cc2d2bA0A286YDU8 1405 aa11.34□□□□□ -0.59
Bdnf-202ENSMUST00000111042 P3h3Q8CG70 732 aa11.34□□□□□ -0.59
Bdnf-202ENSMUST00000111042 Gm1043A0A140LJC2 1431 aa11.34□□□□□ -0.59
Bdnf-202ENSMUST00000111042 NeflP08551 543 aa11.34□□□□□ -0.59
Bdnf-202ENSMUST00000111042 Grin2aP35436 1464 aa11.34□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms