RNA–Protein interactions for RNA: ENSMUST00000110302.7

Clcn3-205, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

TSL 5 BASIC

Gene Clcn3, Length 3,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-205ENSMUST00000110302 Plb1Q3TTY0 1478 aa13.18□□□□□ -0.3
Clcn3-205ENSMUST00000110302 Cux1P53564 1515 aa13.18□□□□□ -0.3
Clcn3-205ENSMUST00000110302 Eea1Q8BL66 1411 aa13.18□□□□□ -0.3
Clcn3-205ENSMUST00000110302 Disp1Q3TDN0 1521 aa13.16□□□□□ -0.3
Clcn3-205ENSMUST00000110302 Rad54l2Q99NG0 1466 aa13.15□□□□□ -0.3
Clcn3-205ENSMUST00000110302 Pcf11G3X9Z4 1553 aa13.15□□□□□ -0.31
Clcn3-205ENSMUST00000110302 Peg3Q3URU2 1571 aa13.14□□□□□ -0.31
Clcn3-205ENSMUST00000110302 Tiam1Q60610 1591 aa13.13□□□□□ -0.31
Clcn3-205ENSMUST00000110302 Adamts12Q811B3 1600 aa13.13□□□□□ -0.31
Clcn3-205ENSMUST00000110302 Abca5Q8K448 1642 aa13.13□□□□□ -0.31
Clcn3-205ENSMUST00000110302 Grin2aP35436 1464 aa13.13□□□□□ -0.31
Clcn3-205ENSMUST00000110302 Ift140E9PY46 1464 aa13.13□□□□□ -0.31
Clcn3-205ENSMUST00000110302 Myt1lP97500 1187 aa13.12□□□□□ -0.31
Clcn3-205ENSMUST00000110302 Nup160Q9Z0W3 1402 aaKnown RBP13.11□□□□□ -0.31
Clcn3-205ENSMUST00000110302 Rpap1Q80TE0 1409 aa13.1□□□□□ -0.31
Clcn3-205ENSMUST00000110302 EprsQ8CGC7 1512 aaKnown RBP13.1□□□□□ -0.31
Clcn3-205ENSMUST00000110302 Fyco1Q8VDC1 1437 aa13.09□□□□□ -0.31
Clcn3-205ENSMUST00000110302 Setd5Q5XJV7 1441 aa13.08□□□□□ -0.32
Clcn3-205ENSMUST00000110302 Abca16E9PWJ7 1678 aa13.08□□□□□ -0.32
Clcn3-205ENSMUST00000110302 Slx4Q6P1D7 1565 aa13.07□□□□□ -0.32
Clcn3-205ENSMUST00000110302 Eif4g3Q80XI3 1579 aaKnown RBP13.07□□□□□ -0.32
Clcn3-205ENSMUST00000110302 WizO88286 1684 aaKnown RBP13.06□□□□□ -0.32
Clcn3-205ENSMUST00000110302 Naip1Q9QWK5 1403 aa13.03□□□□□ -0.32
Clcn3-205ENSMUST00000110302 BlmO88700 1416 aa13.01□□□□□ -0.33
Clcn3-205ENSMUST00000110302 Rusc2Q80U22 1514 aa13.01□□□□□ -0.33
Clcn3-205ENSMUST00000110302 TchhA0A0B4J1F9 1599 aa13□□□□□ -0.33
Clcn3-205ENSMUST00000110302 CadpsQ80TJ1 1355 aa12.99□□□□□ -0.33
Clcn3-205ENSMUST00000110302 Ncapd3Q6ZQK0 1506 aa12.99□□□□□ -0.33
Clcn3-205ENSMUST00000110302 Zeb1Q64318 1117 aa12.99□□□□□ -0.33
Clcn3-205ENSMUST00000110302 CntlnA2AM05 1397 aa12.98□□□□□ -0.33
Clcn3-205ENSMUST00000110302 Soga1E1U8D0 1418 aa12.98□□□□□ -0.33
Clcn3-205ENSMUST00000110302 Gm7298A0A0N4SVU1 1476 aa12.97□□□□□ -0.33
Clcn3-205ENSMUST00000110302 Cc2d2bA0A286YDU8 1405 aa12.97□□□□□ -0.33
Clcn3-205ENSMUST00000110302 Abcc2Q8VI47 1543 aa12.97□□□□□ -0.33
Clcn3-205ENSMUST00000110302 PxdnQ3UQ28 1475 aa12.95□□□□□ -0.34
Clcn3-205ENSMUST00000110302 Gm1043A0A140LJC2 1431 aa12.94□□□□□ -0.34
Clcn3-205ENSMUST00000110302 Mier1Q5UAK0 511 aa12.91□□□□□ -0.34
Clcn3-205ENSMUST00000110302 Kdm5bQ80Y84 1544 aa12.9□□□□□ -0.34
Clcn3-205ENSMUST00000110302 Map3k4O08648 1597 aa12.9□□□□□ -0.34
Clcn3-205ENSMUST00000110302 Plekhg3Q4VAC9 1341 aa12.9□□□□□ -0.34
Clcn3-205ENSMUST00000110302 Dnmt1P13864 1620 aaKnown RBP12.9□□□□□ -0.35
Clcn3-205ENSMUST00000110302 Zcchc11B2RX14 1644 aaKnown RBP12.89□□□□□ -0.35
Clcn3-205ENSMUST00000110302 Gcc2Q8CHG3 1679 aa12.88□□□□□ -0.35
Clcn3-205ENSMUST00000110302 Aebp1Q640N1 1128 aa12.88□□□□□ -0.35
Clcn3-205ENSMUST00000110302 Lmtk2Q3TYD6 1471 aa12.88□□□□□ -0.35
Clcn3-205ENSMUST00000110302 BC005561E9Q5E2 1589 aa12.86□□□□□ -0.35
Clcn3-205ENSMUST00000110302 Shroom2A2ALU4 1481 aa12.85□□□□□ -0.35
Clcn3-205ENSMUST00000110302 Rapgef6Q5NCJ1 1609 aa12.84□□□□□ -0.35
Clcn3-205ENSMUST00000110302 UbtfP25976 765 aaKnown RBP12.84□□□□□ -0.35
Clcn3-205ENSMUST00000110302 Ap3b1Q9Z1T1 1105 aa12.82□□□□□ -0.36
Clcn3-205ENSMUST00000110302 Cdc42bpaQ3UU96 1719 aa12.81□□□□□ -0.36
Clcn3-205ENSMUST00000110302 3425401B19RikD3Z1D3 1412 aa12.81□□□□□ -0.36
Clcn3-205ENSMUST00000110302 Arhgef11Q68FM7 1552 aa12.8□□□□□ -0.36
Clcn3-205ENSMUST00000110302 Rrbp1Q99PL5 1605 aaKnown RBP12.77□□□□□ -0.36
Clcn3-205ENSMUST00000110302 NefmP08553 848 aa12.76□□□□□ -0.37
Clcn3-205ENSMUST00000110302 NexmifQ5DTT1 1515 aa12.76□□□□□ -0.37
Clcn3-205ENSMUST00000110302 Kiaa1551Q5DTW7 1521 aa12.76□□□□□ -0.37
Clcn3-205ENSMUST00000110302 Kif27Q7M6Z4 1394 aa12.76□□□□□ -0.37
Clcn3-205ENSMUST00000110302 Mroh2aD3Z750 1679 aa12.75□□□□□ -0.37
Clcn3-205ENSMUST00000110302 WrnO09053 1401 aa12.75□□□□□ -0.37
Clcn3-205ENSMUST00000110302 Chd1P40201 1711 aa12.73□□□□□ -0.37
Clcn3-205ENSMUST00000110302 Mug1P28665 1476 aa12.72□□□□□ -0.37
Clcn3-205ENSMUST00000110302 Arhgef12Q8R4H2 1543 aaKnown RBP12.72□□□□□ -0.37
Clcn3-205ENSMUST00000110302 Ncoa3O09000 1398 aa12.71□□□□□ -0.38
Clcn3-205ENSMUST00000110302 Cul7Q8VE73 1689 aa12.7□□□□□ -0.38
Clcn3-205ENSMUST00000110302 Naip2Q9QUK4 1447 aa12.69□□□□□ -0.38
Clcn3-205ENSMUST00000110302 A2mQ6GQT1 1474 aa12.69□□□□□ -0.38
Clcn3-205ENSMUST00000110302 Fgd6Q69ZL1 1399 aa12.68□□□□□ -0.38
Clcn3-205ENSMUST00000110302 Mapkbp1Q6NS57 1503 aa12.68□□□□□ -0.38
Clcn3-205ENSMUST00000110302 Ccdc141E9Q8Q6 1531 aa12.68□□□□□ -0.38
Clcn3-205ENSMUST00000110302 Neo1P97798 1493 aa12.67□□□□□ -0.38
Clcn3-205ENSMUST00000110302 Ncoa2Q61026 1462 aa12.67□□□□□ -0.38
Clcn3-205ENSMUST00000110302 Arhgap27A2AB59 869 aa12.67□□□□□ -0.38
Clcn3-205ENSMUST00000110302 Ccnb3Q810T2 1396 aa12.67□□□□□ -0.38
Clcn3-205ENSMUST00000110302 Fhod3Q76LL6 1578 aa12.67□□□□□ -0.38
Clcn3-205ENSMUST00000110302 Fhad1A6PWD2 1420 aa12.66□□□□□ -0.38
Clcn3-205ENSMUST00000110302 Kiaa1210E9Q0C6 1637 aa12.66□□□□□ -0.38
Clcn3-205ENSMUST00000110302 Arhgap31A6X8Z5 1425 aa12.66□□□□□ -0.38
Clcn3-205ENSMUST00000110302 Fam208aQ69ZR9 1610 aaKnown RBP12.65□□□□□ -0.39
Clcn3-205ENSMUST00000110302 Vps8Q0P5W1 1427 aa12.64□□□□□ -0.39
Clcn3-205ENSMUST00000110302 Adcy10Q8C0T9 1614 aa12.64□□□□□ -0.39
Clcn3-205ENSMUST00000110302 Magi1Q6RHR9 1471 aa12.64□□□□□ -0.39
Clcn3-205ENSMUST00000110302 Dennd4bQ3U1Y4 1499 aa12.64□□□□□ -0.39
Clcn3-205ENSMUST00000110302 Lmod2Q3UHZ5 550 aa12.63□□□□□ -0.39
Clcn3-205ENSMUST00000110302 Kdm6bQ5NCY0 1641 aa12.63□□□□□ -0.39
Clcn3-205ENSMUST00000110302 Arhgef40Q3UPH7 1517 aa12.62□□□□□ -0.39
Clcn3-205ENSMUST00000110302 NhsB1AV60 1647 aa12.62□□□□□ -0.39
Clcn3-205ENSMUST00000110302 Mia2Q91ZV0 1396 aa12.62□□□□□ -0.39
Clcn3-205ENSMUST00000110302 Prex2Q3LAC4 1598 aa12.61□□□□□ -0.39
Clcn3-205ENSMUST00000110302 Abcc1O35379 1528 aa12.6□□□□□ -0.39
Clcn3-205ENSMUST00000110302 Rfx7F8VPJ6 1459 aa12.6□□□□□ -0.39
Clcn3-205ENSMUST00000110302 Pdcd11Q6NS46 1862 aaKnown RBP12.6□□□□□ -0.39
Clcn3-205ENSMUST00000110302 Dhx57Q6P5D3 1388 aaKnown RBP12.59□□□□□ -0.39
Clcn3-205ENSMUST00000110302 Fam163aQ8CAA5 168 aa12.59□□□□□ -0.39
Clcn3-205ENSMUST00000110302 Fancd2Q80V62 1450 aa12.58□□□□□ -0.4
Clcn3-205ENSMUST00000110302 UacaQ8CGB3 1411 aa12.57□□□□□ -0.4
Clcn3-205ENSMUST00000110302 Rnf17Q99MV7 1640 aa12.57□□□□□ -0.4
Clcn3-205ENSMUST00000110302 Wdr7Q920I9 1489 aa12.57□□□□□ -0.4
Clcn3-205ENSMUST00000110302 Jph4Q80WT0 628 aa12.56□□□□□ -0.4
Clcn3-205ENSMUST00000110302 Gm14025A2AP89 1413 aa12.56□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms