RNA–Protein interactions for RNA: ENSMUST00000087442.10

Prom1-204, Transcript of Prominin-1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prom1, Length 2,728 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1-204ENSMUST00000087442 Plekhg3Q4VAC9 1341 aa12.62□□□□□ -0.39
Prom1-204ENSMUST00000087442 Pcf11G3X9Z4 1553 aa12.62□□□□□ -0.39
Prom1-204ENSMUST00000087442 Rad54l2Q99NG0 1466 aa12.61□□□□□ -0.39
Prom1-204ENSMUST00000087442 Urb2E9Q7L1 1524 aaKnown RBP12.6□□□□□ -0.39
Prom1-204ENSMUST00000087442 Polr1aO35134 1717 aaKnown RBP12.59□□□□□ -0.39
Prom1-204ENSMUST00000087442 NefmP08553 848 aa12.59□□□□□ -0.39
Prom1-204ENSMUST00000087442 Magi3Q9EQJ9 1476 aa12.58□□□□□ -0.4
Prom1-204ENSMUST00000087442 Ncapd3Q6ZQK0 1506 aa12.58□□□□□ -0.4
Prom1-204ENSMUST00000087442 Pla2r1Q62028 1487 aa12.58□□□□□ -0.4
Prom1-204ENSMUST00000087442 Naip1Q9QWK5 1403 aa12.58□□□□□ -0.4
Prom1-204ENSMUST00000087442 Plb1Q3TTY0 1478 aa12.57□□□□□ -0.4
Prom1-204ENSMUST00000087442 Slx4Q6P1D7 1565 aa12.56□□□□□ -0.4
Prom1-204ENSMUST00000087442 Fyco1Q8VDC1 1437 aa12.56□□□□□ -0.4
Prom1-204ENSMUST00000087442 Gpatch8A2A6A1 1505 aa12.55□□□□□ -0.4
Prom1-204ENSMUST00000087442 Setd1bQ8CFT2 1985 aa12.55□□□□□ -0.4
Prom1-204ENSMUST00000087442 Rpap1Q80TE0 1409 aa12.54□□□□□ -0.4
Prom1-204ENSMUST00000087442 Peg3Q3URU2 1571 aa12.54□□□□□ -0.4
Prom1-204ENSMUST00000087442 Disp1Q3TDN0 1521 aa12.54□□□□□ -0.4
Prom1-204ENSMUST00000087442 Ap3b1Q9Z1T1 1105 aa12.53□□□□□ -0.4
Prom1-204ENSMUST00000087442 Grin2aP35436 1464 aa12.53□□□□□ -0.4
Prom1-204ENSMUST00000087442 EprsQ8CGC7 1512 aaKnown RBP12.53□□□□□ -0.4
Prom1-204ENSMUST00000087442 CntlnA2AM05 1397 aa12.51□□□□□ -0.41
Prom1-204ENSMUST00000087442 Abca5Q8K448 1642 aa12.49□□□□□ -0.41
Prom1-204ENSMUST00000087442 Adamts12Q811B3 1600 aa12.49□□□□□ -0.41
Prom1-204ENSMUST00000087442 Lrriq1Q0P5X1 1673 aa12.49□□□□□ -0.41
Prom1-204ENSMUST00000087442 Pbrm1Q8BSQ9 1634 aaKnown RBP12.49□□□□□ -0.41
Prom1-204ENSMUST00000087442 Ift140E9PY46 1464 aa12.48□□□□□ -0.41
Prom1-204ENSMUST00000087442 BlmO88700 1416 aa12.47□□□□□ -0.41
Prom1-204ENSMUST00000087442 TchhA0A0B4J1F9 1599 aa12.47□□□□□ -0.41
Prom1-204ENSMUST00000087442 CadpsQ80TJ1 1355 aa12.46□□□□□ -0.41
Prom1-204ENSMUST00000087442 Nup160Q9Z0W3 1402 aaKnown RBP12.46□□□□□ -0.41
Prom1-204ENSMUST00000087442 Kdm5bQ80Y84 1544 aa12.46□□□□□ -0.41
Prom1-204ENSMUST00000087442 WizO88286 1684 aaKnown RBP12.45□□□□□ -0.42
Prom1-204ENSMUST00000087442 Aebp1Q640N1 1128 aa12.44□□□□□ -0.42
Prom1-204ENSMUST00000087442 Gm1043A0A140LJC2 1431 aa12.44□□□□□ -0.42
Prom1-204ENSMUST00000087442 Gm7298A0A0N4SVU1 1476 aa12.43□□□□□ -0.42
Prom1-204ENSMUST00000087442 Abca16E9PWJ7 1678 aa12.42□□□□□ -0.42
Prom1-204ENSMUST00000087442 Soga1E1U8D0 1418 aa12.4□□□□□ -0.42
Prom1-204ENSMUST00000087442 PxdnQ3UQ28 1475 aa12.39□□□□□ -0.43
Prom1-204ENSMUST00000087442 Pcgf6Q99NA9 353 aa12.39□□□□□ -0.43
Prom1-204ENSMUST00000087442 3425401B19RikD3Z1D3 1412 aa12.38□□□□□ -0.43
Prom1-204ENSMUST00000087442 Cc2d2bA0A286YDU8 1405 aa12.35□□□□□ -0.43
Prom1-204ENSMUST00000087442 Lmod2Q3UHZ5 550 aa12.34□□□□□ -0.43
Prom1-204ENSMUST00000087442 Lmtk2Q3TYD6 1471 aa12.34□□□□□ -0.43
Prom1-204ENSMUST00000087442 Abcc2Q8VI47 1543 aa12.33□□□□□ -0.43
Prom1-204ENSMUST00000087442 Supt5hO55201 1082 aaKnown RBP12.32□□□□□ -0.44
Prom1-204ENSMUST00000087442 Rusc2Q80U22 1514 aa12.31□□□□□ -0.44
Prom1-204ENSMUST00000087442 Kif27Q7M6Z4 1394 aa12.31□□□□□ -0.44
Prom1-204ENSMUST00000087442 Eif4g3Q80XI3 1579 aaKnown RBP12.29□□□□□ -0.44
Prom1-204ENSMUST00000087442 Gcc2Q8CHG3 1679 aa12.29□□□□□ -0.44
Prom1-204ENSMUST00000087442 BC005561E9Q5E2 1589 aa12.28□□□□□ -0.44
Prom1-204ENSMUST00000087442 Shroom2A2ALU4 1481 aa12.28□□□□□ -0.44
Prom1-204ENSMUST00000087442 WrnO09053 1401 aa12.27□□□□□ -0.45
Prom1-204ENSMUST00000087442 NexmifQ5DTT1 1515 aa12.26□□□□□ -0.45
Prom1-204ENSMUST00000087442 Rapgef6Q5NCJ1 1609 aa12.26□□□□□ -0.45
Prom1-204ENSMUST00000087442 Naip2Q9QUK4 1447 aa12.25□□□□□ -0.45
Prom1-204ENSMUST00000087442 Fhad1A6PWD2 1420 aa12.25□□□□□ -0.45
Prom1-204ENSMUST00000087442 Ccnb3Q810T2 1396 aa12.25□□□□□ -0.45
Prom1-204ENSMUST00000087442 A2mQ6GQT1 1474 aa12.25□□□□□ -0.45
Prom1-204ENSMUST00000087442 Map3k4O08648 1597 aa12.24□□□□□ -0.45
Prom1-204ENSMUST00000087442 TonslQ6NZL6 1363 aa12.23□□□□□ -0.45
Prom1-204ENSMUST00000087442 Mia2Q91ZV0 1396 aa12.22□□□□□ -0.45
Prom1-204ENSMUST00000087442 Dnmt1P13864 1620 aaKnown RBP12.22□□□□□ -0.45
Prom1-204ENSMUST00000087442 Vps8Q0P5W1 1427 aa12.22□□□□□ -0.45
Prom1-204ENSMUST00000087442 Arhgef11Q68FM7 1552 aa12.22□□□□□ -0.45
Prom1-204ENSMUST00000087442 Mug1P28665 1476 aa12.21□□□□□ -0.45
Prom1-204ENSMUST00000087442 Zcchc11B2RX14 1644 aaKnown RBP12.21□□□□□ -0.45
Prom1-204ENSMUST00000087442 Ncoa3O09000 1398 aa12.21□□□□□ -0.45
Prom1-204ENSMUST00000087442 Arhgap27A2AB59 869 aa12.21□□□□□ -0.46
Prom1-204ENSMUST00000087442 Las1lA2BE28 776 aaKnown RBP12.21□□□□□ -0.46
Prom1-204ENSMUST00000087442 Cdc42bpaQ3UU96 1719 aa12.2□□□□□ -0.46
Prom1-204ENSMUST00000087442 Fam50aQ9WV03 339 aaKnown RBP12.19□□□□□ -0.46
Prom1-204ENSMUST00000087442 Kiaa1551Q5DTW7 1521 aa12.18□□□□□ -0.46
Prom1-204ENSMUST00000087442 Dennd4bQ3U1Y4 1499 aa12.17□□□□□ -0.46
Prom1-204ENSMUST00000087442 Sall2Q9QX96 1004 aa12.17□□□□□ -0.46
Prom1-204ENSMUST00000087442 Aebp2Q9Z248 504 aaKnown RBP12.16□□□□□ -0.46
Prom1-204ENSMUST00000087442 Arhgap31A6X8Z5 1425 aa12.15□□□□□ -0.46
Prom1-204ENSMUST00000087442 Mroh2aD3Z750 1679 aa12.15□□□□□ -0.46
Prom1-204ENSMUST00000087442 Eid3Q3V124 375 aa12.14□□□□□ -0.47
Prom1-204ENSMUST00000087442 Ankrd36D3Z4K0 1415 aa12.14□□□□□ -0.47
Prom1-204ENSMUST00000087442 UacaQ8CGB3 1411 aa12.14□□□□□ -0.47
Prom1-204ENSMUST00000087442 Fhod3Q76LL6 1578 aa12.13□□□□□ -0.47
Prom1-204ENSMUST00000087442 Arhgef40Q3UPH7 1517 aa12.13□□□□□ -0.47
Prom1-204ENSMUST00000087442 Ncoa2Q61026 1462 aa12.13□□□□□ -0.47
Prom1-204ENSMUST00000087442 Ccdc141E9Q8Q6 1531 aa12.12□□□□□ -0.47
Prom1-204ENSMUST00000087442 Ccer2J3QPU5 274 aa12.12□□□□□ -0.47
Prom1-204ENSMUST00000087442 Neo1P97798 1493 aa12.12□□□□□ -0.47
Prom1-204ENSMUST00000087442 Mapkbp1Q6NS57 1503 aa12.12□□□□□ -0.47
Prom1-204ENSMUST00000087442 Arhgef12Q8R4H2 1543 aaKnown RBP12.12□□□□□ -0.47
Prom1-204ENSMUST00000087442 Adcy10Q8C0T9 1614 aa12.11□□□□□ -0.47
Prom1-204ENSMUST00000087442 Rrbp1Q99PL5 1605 aaKnown RBP12.11□□□□□ -0.47
Prom1-204ENSMUST00000087442 Magi1Q6RHR9 1471 aa12.11□□□□□ -0.47
Prom1-204ENSMUST00000087442 Kdm6bQ5NCY0 1641 aa12.11□□□□□ -0.47
Prom1-204ENSMUST00000087442 Rfx7F8VPJ6 1459 aa12.11□□□□□ -0.47
Prom1-204ENSMUST00000087442 Fgd6Q69ZL1 1399 aa12.1□□□□□ -0.47
Prom1-204ENSMUST00000087442 Cul7Q8VE73 1689 aa12.1□□□□□ -0.47
Prom1-204ENSMUST00000087442 Abcc5Q9R1X5 1436 aa12.09□□□□□ -0.47
Prom1-204ENSMUST00000087442 Dhx57Q6P5D3 1388 aaKnown RBP12.08□□□□□ -0.48
Prom1-204ENSMUST00000087442 Fam163aQ8CAA5 168 aa12.08□□□□□ -0.48
Prom1-204ENSMUST00000087442 Prex2Q3LAC4 1598 aa12.08□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms