RNA–Protein interactions for RNA: ENSMUST00000084589.10

Cln3-202, Transcript of Battenin, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Cln3, Length 3,203 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3-202ENSMUST00000084589 Kif21aQ9QXL2 1672 aa13.96□□□□□ -0.17
Cln3-202ENSMUST00000084589 AqrQ8CFQ3 1481 aaKnown RBP13.95□□□□□ -0.18
Cln3-202ENSMUST00000084589 Fkbp15Q6P9Q6 1216 aaKnown RBP13.95□□□□□ -0.18
Cln3-202ENSMUST00000084589 Samd9lQ69Z37 1561 aa13.94□□□□□ -0.18
Cln3-202ENSMUST00000084589 Efcab5A0JP43 1406 aa13.94□□□□□ -0.18
Cln3-202ENSMUST00000084589 Cux1P53564 1515 aa13.92□□□□□ -0.18
Cln3-202ENSMUST00000084589 Carmil1Q6EDY6 1374 aa13.91□□□□□ -0.18
Cln3-202ENSMUST00000084589 Plb1Q3TTY0 1478 aa13.91□□□□□ -0.18
Cln3-202ENSMUST00000084589 Aebp1Q640N1 1128 aa13.9□□□□□ -0.18
Cln3-202ENSMUST00000084589 Chic2Q9D9G3 165 aa13.9□□□□□ -0.18
Cln3-202ENSMUST00000084589 Sall2Q9QX96 1004 aa13.9□□□□□ -0.18
Cln3-202ENSMUST00000084589 Aebp2Q9Z248 504 aaKnown RBP13.9□□□□□ -0.18
Cln3-202ENSMUST00000084589 Crocc2F6XLV1 1638 aa13.89□□□□□ -0.19
Cln3-202ENSMUST00000084589 Arhgap27A2AB59 869 aa13.88□□□□□ -0.19
Cln3-202ENSMUST00000084589 Rpap1Q80TE0 1409 aa13.88□□□□□ -0.19
Cln3-202ENSMUST00000084589 Ankrd26Q811D2 1581 aa13.88□□□□□ -0.19
Cln3-202ENSMUST00000084589 Urb2E9Q7L1 1524 aaKnown RBP13.88□□□□□ -0.19
Cln3-202ENSMUST00000084589 Arhgef5E9Q7D5 1581 aa13.87□□□□□ -0.19
Cln3-202ENSMUST00000084589 TonslQ6NZL6 1363 aa13.87□□□□□ -0.19
Cln3-202ENSMUST00000084589 Map3k1P53349 1493 aa13.87□□□□□ -0.19
Cln3-202ENSMUST00000084589 Pcf11G3X9Z4 1553 aa13.86□□□□□ -0.19
Cln3-202ENSMUST00000084589 Naip1Q9QWK5 1403 aa13.84□□□□□ -0.19
Cln3-202ENSMUST00000084589 SynmQ70IV5 1561 aa13.83□□□□□ -0.2
Cln3-202ENSMUST00000084589 Slx4Q6P1D7 1565 aa13.82□□□□□ -0.2
Cln3-202ENSMUST00000084589 Ifnlr1Q8CGK5 535 aa13.81□□□□□ -0.2
Cln3-202ENSMUST00000084589 Mapk8ip2Q9ERE9 830 aa13.8□□□□□ -0.2
Cln3-202ENSMUST00000084589 Tiam1Q60610 1591 aa13.79□□□□□ -0.2
Cln3-202ENSMUST00000084589 Ncapd3Q6ZQK0 1506 aa13.78□□□□□ -0.2
Cln3-202ENSMUST00000084589 EprsQ8CGC7 1512 aaKnown RBP13.76□□□□□ -0.21
Cln3-202ENSMUST00000084589 Zbtb7cQ8VCZ7 619 aa13.76□□□□□ -0.21
Cln3-202ENSMUST00000084589 Fyco1Q8VDC1 1437 aa13.76□□□□□ -0.21
Cln3-202ENSMUST00000084589 Pla2r1Q62028 1487 aa13.74□□□□□ -0.21
Cln3-202ENSMUST00000084589 Grin2aP35436 1464 aa13.74□□□□□ -0.21
Cln3-202ENSMUST00000084589 Kif27Q7M6Z4 1394 aa13.74□□□□□ -0.21
Cln3-202ENSMUST00000084589 CntlnA2AM05 1397 aa13.73□□□□□ -0.21
Cln3-202ENSMUST00000084589 Neurod1Q60867 357 aa13.72□□□□□ -0.21
Cln3-202ENSMUST00000084589 WizO88286 1684 aaKnown RBP13.71□□□□□ -0.22
Cln3-202ENSMUST00000084589 Disp1Q3TDN0 1521 aa13.71□□□□□ -0.22
Cln3-202ENSMUST00000084589 CadpsQ80TJ1 1355 aa13.71□□□□□ -0.22
Cln3-202ENSMUST00000084589 Gm7298A0A0N4SVU1 1476 aa13.7□□□□□ -0.22
Cln3-202ENSMUST00000084589 Magi3Q9EQJ9 1476 aa13.7□□□□□ -0.22
Cln3-202ENSMUST00000084589 WrnO09053 1401 aa13.7□□□□□ -0.22
Cln3-202ENSMUST00000084589 Erich3F6QRE9 1637 aa13.69□□□□□ -0.22
Cln3-202ENSMUST00000084589 PxdnQ3UQ28 1475 aa13.68□□□□□ -0.22
Cln3-202ENSMUST00000084589 Ccnb3Q810T2 1396 aa13.67□□□□□ -0.22
Cln3-202ENSMUST00000084589 Lmo7E9PYF4 1699 aaKnown RBP13.66□□□□□ -0.22
Cln3-202ENSMUST00000084589 NclP09405 707 aaKnown RBP13.66□□□□□ -0.22
Cln3-202ENSMUST00000084589 AknaQ80VW7 1404 aa13.65□□□□□ -0.22
Cln3-202ENSMUST00000084589 3425401B19RikD3Z1D3 1412 aa13.64□□□□□ -0.23
Cln3-202ENSMUST00000084589 Lrriq1Q0P5X1 1673 aa13.63□□□□□ -0.23
Cln3-202ENSMUST00000084589 Polr1aO35134 1717 aaKnown RBP13.63□□□□□ -0.23
Cln3-202ENSMUST00000084589 Hspa5P20029 655 aaKnown RBP13.63□□□□□ -0.23
Cln3-202ENSMUST00000084589 Gpatch8A2A6A1 1505 aa13.63□□□□□ -0.23
Cln3-202ENSMUST00000084589 Setd1bQ8CFT2 1985 aa13.62□□□□□ -0.23
Cln3-202ENSMUST00000084589 Gm1043A0A140LJC2 1431 aa13.6□□□□□ -0.23
Cln3-202ENSMUST00000084589 Pelp1Q9DBD5 1123 aaKnown RBP13.6□□□□□ -0.23
Cln3-202ENSMUST00000084589 Cabp1Q9JLK7 227 aa13.59□□□□□ -0.23
Cln3-202ENSMUST00000084589 Ift140E9PY46 1464 aa13.57□□□□□ -0.24
Cln3-202ENSMUST00000084589 ClspnQ80YR7 1315 aa13.56□□□□□ -0.24
Cln3-202ENSMUST00000084589 TchhA0A0B4J1F9 1599 aa13.55□□□□□ -0.24
Cln3-202ENSMUST00000084589 BC005561E9Q5E2 1589 aa13.55□□□□□ -0.24
Cln3-202ENSMUST00000084589 Zfp644E9QA22 1323 aa13.55□□□□□ -0.24
Cln3-202ENSMUST00000084589 NexmifQ5DTT1 1515 aa13.54□□□□□ -0.24
Cln3-202ENSMUST00000084589 Abca16E9PWJ7 1678 aa13.52□□□□□ -0.25
Cln3-202ENSMUST00000084589 A2mQ6GQT1 1474 aa13.51□□□□□ -0.25
Cln3-202ENSMUST00000084589 Abca5Q8K448 1642 aa13.51□□□□□ -0.25
Cln3-202ENSMUST00000084589 Arhgap31A6X8Z5 1425 aa13.5□□□□□ -0.25
Cln3-202ENSMUST00000084589 Soga1E1U8D0 1418 aa13.49□□□□□ -0.25
Cln3-202ENSMUST00000084589 Nup160Q9Z0W3 1402 aaKnown RBP13.49□□□□□ -0.25
Cln3-202ENSMUST00000084589 Neo1P97798 1493 aa13.49□□□□□ -0.25
Cln3-202ENSMUST00000084589 Adamts12Q811B3 1600 aa13.48□□□□□ -0.25
Cln3-202ENSMUST00000084589 Ncoa3O09000 1398 aa13.48□□□□□ -0.25
Cln3-202ENSMUST00000084589 Zbtb4Q5F293 982 aa13.47□□□□□ -0.25
Cln3-202ENSMUST00000084589 Nop58Q6DFW4 536 aaKnown RBP13.46□□□□□ -0.25
Cln3-202ENSMUST00000084589 Hnrnpul2Q00PI9 745 aaKnown RBP13.45□□□□□ -0.26
Cln3-202ENSMUST00000084589 Cc2d2bA0A286YDU8 1405 aa13.45□□□□□ -0.26
Cln3-202ENSMUST00000084589 Kdm5bQ80Y84 1544 aa13.45□□□□□ -0.26
Cln3-202ENSMUST00000084589 Mug1P28665 1476 aa13.45□□□□□ -0.26
Cln3-202ENSMUST00000084589 Mia2Q91ZV0 1396 aa13.44□□□□□ -0.26
Cln3-202ENSMUST00000084589 Jph4Q80WT0 628 aa13.44□□□□□ -0.26
Cln3-202ENSMUST00000084589 Sin3aQ60520 1274 aaKnown RBP13.44□□□□□ -0.26
Cln3-202ENSMUST00000084589 Mtus2Q3UHD3 1353 aa13.43□□□□□ -0.26
Cln3-202ENSMUST00000084589 Naip2Q9QUK4 1447 aa13.43□□□□□ -0.26
Cln3-202ENSMUST00000084589 Shroom2A2ALU4 1481 aa13.43□□□□□ -0.26
Cln3-202ENSMUST00000084589 Slc24a1Q91WD8 1130 aa13.43□□□□□ -0.26
Cln3-202ENSMUST00000084589 Tdrd9Q14BI7 1383 aa13.43□□□□□ -0.26
Cln3-202ENSMUST00000084589 Abcc2Q8VI47 1543 aa13.41□□□□□ -0.26
Cln3-202ENSMUST00000084589 Mphosph9A6H5Y1 991 aa13.41□□□□□ -0.26
Cln3-202ENSMUST00000084589 Peg3Q3URU2 1571 aa13.41□□□□□ -0.26
Cln3-202ENSMUST00000084589 Arid3cA6PWV5 409 aa13.41□□□□□ -0.26
Cln3-202ENSMUST00000084589 Fhad1A6PWD2 1420 aa13.39□□□□□ -0.27
Cln3-202ENSMUST00000084589 Cdk11bP24788 784 aaKnown RBP13.39□□□□□ -0.27
Cln3-202ENSMUST00000084589 Arhgef40Q3UPH7 1517 aa13.39□□□□□ -0.27
Cln3-202ENSMUST00000084589 Rapgef6Q5NCJ1 1609 aa13.38□□□□□ -0.27
Cln3-202ENSMUST00000084589 Plekhh2Q8C115 1491 aa13.37□□□□□ -0.27
Cln3-202ENSMUST00000084589 Rgl3Q3UYI5 709 aa13.37□□□□□ -0.27
Cln3-202ENSMUST00000084589 Rrp7aQ9D1C9 280 aaKnown RBP13.37□□□□□ -0.27
Cln3-202ENSMUST00000084589 Prex2Q3LAC4 1598 aa13.37□□□□□ -0.27
Cln3-202ENSMUST00000084589 Rusc2Q80U22 1514 aa13.36□□□□□ -0.27
Cln3-202ENSMUST00000084589 Pkd2O35245 966 aa13.36□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms