RNA–Protein interactions for RNA: ENSMUST00000078680.12

Ush1c-202, Transcript of Harmonin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ush1c, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1c-202ENSMUST00000078680 Shroom2A2ALU4 1481 aa23.25■■□□□ 1.31
Ush1c-202ENSMUST00000078680 Map3k1P53349 1493 aa23.24■■□□□ 1.31
Ush1c-202ENSMUST00000078680 Gpatch8A2A6A1 1505 aa23.24■■□□□ 1.31
Ush1c-202ENSMUST00000078680 Eif4g1Q6NZJ6 1600 aaKnown RBP23.23■■□□□ 1.31
Ush1c-202ENSMUST00000078680 Carmil1Q6EDY6 1374 aa23.2■■□□□ 1.3
Ush1c-202ENSMUST00000078680 Myt1lP97500 1187 aa23.15■■□□□ 1.3
Ush1c-202ENSMUST00000078680 EprsQ8CGC7 1512 aaKnown RBP23.15■■□□□ 1.3
Ush1c-202ENSMUST00000078680 Pabpn1Q8CCS6 302 aaKnown RBP23.14■■□□□ 1.29
Ush1c-202ENSMUST00000078680 Fgd6Q69ZL1 1399 aa23.12■■□□□ 1.29
Ush1c-202ENSMUST00000078680 Clip1Q922J3 1391 aa23.11■■□□□ 1.29
Ush1c-202ENSMUST00000078680 Pelp1Q9DBD5 1123 aaKnown RBP23.07■■□□□ 1.28
Ush1c-202ENSMUST00000078680 Adamts12Q811B3 1600 aa23.07■■□□□ 1.28
Ush1c-202ENSMUST00000078680 PxdnQ3UQ28 1475 aa23.05■■□□□ 1.28
Ush1c-202ENSMUST00000078680 WizO88286 1684 aaKnown RBP23.05■■□□□ 1.28
Ush1c-202ENSMUST00000078680 TchhA0A0B4J1F9 1599 aa23.04■■□□□ 1.28
Ush1c-202ENSMUST00000078680 Arhgap27A2AB59 869 aa23.03■■□□□ 1.28
Ush1c-202ENSMUST00000078680 CadpsQ80TJ1 1355 aa23.01■■□□□ 1.27
Ush1c-202ENSMUST00000078680 Abca16E9PWJ7 1678 aa23.01■■□□□ 1.27
Ush1c-202ENSMUST00000078680 Abcc2Q8VI47 1543 aa23■■□□□ 1.27
Ush1c-202ENSMUST00000078680 AknaQ80VW7 1404 aa22.97■■□□□ 1.27
Ush1c-202ENSMUST00000078680 Polr1aO35134 1717 aaKnown RBP22.97■■□□□ 1.27
Ush1c-202ENSMUST00000078680 Gm7298A0A0N4SVU1 1476 aa22.97■■□□□ 1.27
Ush1c-202ENSMUST00000078680 Cux1P53564 1515 aa22.97■■□□□ 1.27
Ush1c-202ENSMUST00000078680 Rpap1Q80TE0 1409 aa22.96■■□□□ 1.27
Ush1c-202ENSMUST00000078680 Dnmt1P13864 1620 aaKnown RBP22.92■■□□□ 1.26
Ush1c-202ENSMUST00000078680 Soga1E1U8D0 1418 aa22.91■■□□□ 1.26
Ush1c-202ENSMUST00000078680 Map3k4O08648 1597 aa22.9■■□□□ 1.26
Ush1c-202ENSMUST00000078680 Fyco1Q8VDC1 1437 aa22.89■■□□□ 1.25
Ush1c-202ENSMUST00000078680 Dnajc5P60904 198 aa22.88■■□□□ 1.25
Ush1c-202ENSMUST00000078680 Neo1P97798 1493 aa22.87■■□□□ 1.25
Ush1c-202ENSMUST00000078680 Col17a1Q07563 1470 aa22.86■■□□□ 1.25
Ush1c-202ENSMUST00000078680 Abcc1O35379 1528 aa22.86■■□□□ 1.25
Ush1c-202ENSMUST00000078680 BC005561E9Q5E2 1589 aa22.84■■□□□ 1.25
Ush1c-202ENSMUST00000078680 Abca5Q8K448 1642 aa22.84■■□□□ 1.25
Ush1c-202ENSMUST00000078680 Supt5hO55201 1082 aaKnown RBP22.83■■□□□ 1.25
Ush1c-202ENSMUST00000078680 Ankrd26Q811D2 1581 aa22.83■■□□□ 1.25
Ush1c-202ENSMUST00000078680 Slx4Q6P1D7 1565 aa22.82■■□□□ 1.24
Ush1c-202ENSMUST00000078680 Gapvd1Q6PAR5 1458 aa22.78■■□□□ 1.24
Ush1c-202ENSMUST00000078680 Setd5Q5XJV7 1441 aa22.78■■□□□ 1.24
Ush1c-202ENSMUST00000078680 WrnO09053 1401 aa22.78■■□□□ 1.24
Ush1c-202ENSMUST00000078680 Gm14025A2AP89 1413 aa22.76■■□□□ 1.23
Ush1c-202ENSMUST00000078680 Eea1Q8BL66 1411 aa22.75■■□□□ 1.23
Ush1c-202ENSMUST00000078680 Ythdc2B2RR83 1445 aaKnown RBP22.74■■□□□ 1.23
Ush1c-202ENSMUST00000078680 Jph4Q80WT0 628 aa22.74■■□□□ 1.23
Ush1c-202ENSMUST00000078680 Chd1P40201 1711 aa22.72■■□□□ 1.23
Ush1c-202ENSMUST00000078680 Zcchc11B2RX14 1644 aaKnown RBP22.71■■□□□ 1.23
Ush1c-202ENSMUST00000078680 Aebp1Q640N1 1128 aa22.7■■□□□ 1.23
Ush1c-202ENSMUST00000078680 Cep170Q6A065 1588 aa22.7■■□□□ 1.22
Ush1c-202ENSMUST00000078680 Arhgef12Q8R4H2 1543 aaKnown RBP22.68■■□□□ 1.22
Ush1c-202ENSMUST00000078680 Ap3b1Q9Z1T1 1105 aa22.67■■□□□ 1.22
Ush1c-202ENSMUST00000078680 Erich3F6QRE9 1637 aa22.67■■□□□ 1.22
Ush1c-202ENSMUST00000078680 PtprtQ99M80 1454 aa22.66■■□□□ 1.22
Ush1c-202ENSMUST00000078680 Gm156Q58A37 223 aa22.66■■□□□ 1.22
Ush1c-202ENSMUST00000078680 Adgrl3Q80TS3 1537 aa22.63■■□□□ 1.21
Ush1c-202ENSMUST00000078680 Arap1Q4LDD4 1452 aa22.61■■□□□ 1.21
Ush1c-202ENSMUST00000078680 Lmo7E9PYF4 1699 aaKnown RBP22.6■■□□□ 1.21
Ush1c-202ENSMUST00000078680 Fkbp15Q6P9Q6 1216 aaKnown RBP22.58■■□□□ 1.21
Ush1c-202ENSMUST00000078680 Pcf11G3X9Z4 1553 aa22.58■■□□□ 1.21
Ush1c-202ENSMUST00000078680 BlmO88700 1416 aa22.58■■□□□ 1.21
Ush1c-202ENSMUST00000078680 Arhgap31A6X8Z5 1425 aa22.56■■□□□ 1.2
Ush1c-202ENSMUST00000078680 NefmP08553 848 aa22.55■■□□□ 1.2
Ush1c-202ENSMUST00000078680 Kif27Q7M6Z4 1394 aa22.55■■□□□ 1.2
Ush1c-202ENSMUST00000078680 Rrbp1Q99PL5 1605 aaKnown RBP22.53■■□□□ 1.2
Ush1c-202ENSMUST00000078680 Neurod1Q60867 357 aa22.5■■□□□ 1.19
Ush1c-202ENSMUST00000078680 Arhgef5E9Q7D5 1581 aa22.49■■□□□ 1.19
Ush1c-202ENSMUST00000078680 CntlnA2AM05 1397 aa22.48■■□□□ 1.19
Ush1c-202ENSMUST00000078680 AI481877A2ALV5 1481 aa22.48■■□□□ 1.19
Ush1c-202ENSMUST00000078680 Ccdc141E9Q8Q6 1531 aa22.47■■□□□ 1.19
Ush1c-202ENSMUST00000078680 Kdm5bQ80Y84 1544 aa22.47■■□□□ 1.19
Ush1c-202ENSMUST00000078680 Rapgef6Q5NCJ1 1609 aa22.44■■□□□ 1.18
Ush1c-202ENSMUST00000078680 Ifnlr1Q8CGK5 535 aa22.43■■□□□ 1.18
Ush1c-202ENSMUST00000078680 Igf1rQ60751 1373 aa22.41■■□□□ 1.18
Ush1c-202ENSMUST00000078680 Ncoa2Q61026 1462 aa22.41■■□□□ 1.18
Ush1c-202ENSMUST00000078680 Naip1Q9QWK5 1403 aa22.4■■□□□ 1.18
Ush1c-202ENSMUST00000078680 Mroh2aD3Z750 1679 aa22.38■■□□□ 1.17
Ush1c-202ENSMUST00000078680 Las1lA2BE28 776 aaKnown RBP22.38■■□□□ 1.17
Ush1c-202ENSMUST00000078680 Setbp1Q9Z180 1582 aa22.38■■□□□ 1.17
Ush1c-202ENSMUST00000078680 Lmod2Q3UHZ5 550 aa22.36■■□□□ 1.17
Ush1c-202ENSMUST00000078680 Ttbk1Q6PCN3 1308 aa22.36■■□□□ 1.17
Ush1c-202ENSMUST00000078680 Pprc1Q6NZN1 1644 aa22.35■■□□□ 1.17
Ush1c-202ENSMUST00000078680 Ncoa3O09000 1398 aa22.35■■□□□ 1.17
Ush1c-202ENSMUST00000078680 Gm1043A0A140LJC2 1431 aa22.35■■□□□ 1.17
Ush1c-202ENSMUST00000078680 Tiam1Q60610 1591 aa22.35■■□□□ 1.17
Ush1c-202ENSMUST00000078680 Plekhg3Q4VAC9 1341 aa22.34■■□□□ 1.17
Ush1c-202ENSMUST00000078680 Magi1Q6RHR9 1471 aa22.34■■□□□ 1.17
Ush1c-202ENSMUST00000078680 Arhgef11Q68FM7 1552 aa22.33■■□□□ 1.17
Ush1c-202ENSMUST00000078680 NhsB1AV60 1647 aa22.31■■□□□ 1.16
Ush1c-202ENSMUST00000078680 Peg3Q3URU2 1571 aa22.31■■□□□ 1.16
Ush1c-202ENSMUST00000078680 Lrrc9Q8CDN9 1456 aa22.31■■□□□ 1.16
Ush1c-202ENSMUST00000078680 Znf608Q56A10 1511 aa22.3■■□□□ 1.16
Ush1c-202ENSMUST00000078680 Mug1P28665 1476 aa22.3■■□□□ 1.16
Ush1c-202ENSMUST00000078680 Fancd2Q80V62 1450 aa22.3■■□□□ 1.16
Ush1c-202ENSMUST00000078680 Fam163aQ8CAA5 168 aa22.28■■□□□ 1.16
Ush1c-202ENSMUST00000078680 Cul7Q8VE73 1689 aa22.28■■□□□ 1.16
Ush1c-202ENSMUST00000078680 Wdr7Q920I9 1489 aa22.28■■□□□ 1.16
Ush1c-202ENSMUST00000078680 Arid3cA6PWV5 409 aa22.28■■□□□ 1.16
Ush1c-202ENSMUST00000078680 Atp10dQ8K2X1 1416 aa22.26■■□□□ 1.15
Ush1c-202ENSMUST00000078680 Mier1Q5UAK0 511 aa22.26■■□□□ 1.15
Ush1c-202ENSMUST00000078680 Gcc2Q8CHG3 1679 aa22.26■■□□□ 1.15
Ush1c-202ENSMUST00000078680 Ak9G3UYQ4 1894 aa22.24■■□□□ 1.15
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms