RNA–Protein interactions for RNA: ENSMUST00000072551.6

Clrn1-203, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 1,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-203ENSMUST00000072551 Abca16E9PWJ7 1678 aa18.54■□□□□ 0.56
Clrn1-203ENSMUST00000072551 WizO88286 1684 aaKnown RBP18.54■□□□□ 0.56
Clrn1-203ENSMUST00000072551 Adamts12Q811B3 1600 aa18.5■□□□□ 0.55
Clrn1-203ENSMUST00000072551 Shroom2A2ALU4 1481 aa18.5■□□□□ 0.55
Clrn1-203ENSMUST00000072551 EprsQ8CGC7 1512 aaKnown RBP18.49■□□□□ 0.55
Clrn1-203ENSMUST00000072551 Carmil1Q6EDY6 1374 aa18.48■□□□□ 0.55
Clrn1-203ENSMUST00000072551 PxdnQ3UQ28 1475 aa18.46■□□□□ 0.55
Clrn1-203ENSMUST00000072551 Abcc2Q8VI47 1543 aa18.46■□□□□ 0.55
Clrn1-203ENSMUST00000072551 TchhA0A0B4J1F9 1599 aa18.44■□□□□ 0.54
Clrn1-203ENSMUST00000072551 Cux1P53564 1515 aa18.43■□□□□ 0.54
Clrn1-203ENSMUST00000072551 Myt1lP97500 1187 aa18.41■□□□□ 0.54
Clrn1-203ENSMUST00000072551 Clip1Q922J3 1391 aa18.4■□□□□ 0.54
Clrn1-203ENSMUST00000072551 Dnmt1P13864 1620 aaKnown RBP18.4■□□□□ 0.54
Clrn1-203ENSMUST00000072551 BC005561E9Q5E2 1589 aa18.38■□□□□ 0.53
Clrn1-203ENSMUST00000072551 Polr1aO35134 1717 aaKnown RBP18.38■□□□□ 0.53
Clrn1-203ENSMUST00000072551 Fgd6Q69ZL1 1399 aa18.37■□□□□ 0.53
Clrn1-203ENSMUST00000072551 Abca5Q8K448 1642 aa18.36■□□□□ 0.53
Clrn1-203ENSMUST00000072551 Ankrd26Q811D2 1581 aa18.36■□□□□ 0.53
Clrn1-203ENSMUST00000072551 CadpsQ80TJ1 1355 aa18.35■□□□□ 0.53
Clrn1-203ENSMUST00000072551 Map3k4O08648 1597 aa18.34■□□□□ 0.53
Clrn1-203ENSMUST00000072551 Gm7298A0A0N4SVU1 1476 aa18.34■□□□□ 0.53
Clrn1-203ENSMUST00000072551 Chd1P40201 1711 aa18.32■□□□□ 0.52
Clrn1-203ENSMUST00000072551 Rpap1Q80TE0 1409 aa18.3■□□□□ 0.52
Clrn1-203ENSMUST00000072551 Pabpn1Q8CCS6 302 aaKnown RBP18.3■□□□□ 0.52
Clrn1-203ENSMUST00000072551 Zcchc11B2RX14 1644 aaKnown RBP18.28■□□□□ 0.52
Clrn1-203ENSMUST00000072551 Erich3F6QRE9 1637 aa18.28■□□□□ 0.52
Clrn1-203ENSMUST00000072551 Arhgap27A2AB59 869 aa18.28■□□□□ 0.52
Clrn1-203ENSMUST00000072551 Soga1E1U8D0 1418 aa18.27■□□□□ 0.52
Clrn1-203ENSMUST00000072551 AknaQ80VW7 1404 aa18.27■□□□□ 0.52
Clrn1-203ENSMUST00000072551 Slx4Q6P1D7 1565 aa18.27■□□□□ 0.52
Clrn1-203ENSMUST00000072551 Neo1P97798 1493 aa18.26■□□□□ 0.51
Clrn1-203ENSMUST00000072551 Abcc1O35379 1528 aa18.26■□□□□ 0.51
Clrn1-203ENSMUST00000072551 Pelp1Q9DBD5 1123 aaKnown RBP18.25■□□□□ 0.51
Clrn1-203ENSMUST00000072551 Fyco1Q8VDC1 1437 aa18.25■□□□□ 0.51
Clrn1-203ENSMUST00000072551 Lmo7E9PYF4 1699 aaKnown RBP18.23■□□□□ 0.51
Clrn1-203ENSMUST00000072551 Col17a1Q07563 1470 aa18.21■□□□□ 0.51
Clrn1-203ENSMUST00000072551 Pcf11G3X9Z4 1553 aa18.17■□□□□ 0.5
Clrn1-203ENSMUST00000072551 Setd5Q5XJV7 1441 aa18.15■□□□□ 0.5
Clrn1-203ENSMUST00000072551 Cep170Q6A065 1588 aa18.15■□□□□ 0.5
Clrn1-203ENSMUST00000072551 Arap1Q4LDD4 1452 aa18.15■□□□□ 0.5
Clrn1-203ENSMUST00000072551 Gapvd1Q6PAR5 1458 aa18.15■□□□□ 0.5
Clrn1-203ENSMUST00000072551 WrnO09053 1401 aa18.14■□□□□ 0.5
Clrn1-203ENSMUST00000072551 Arhgef12Q8R4H2 1543 aaKnown RBP18.13■□□□□ 0.49
Clrn1-203ENSMUST00000072551 Eea1Q8BL66 1411 aa18.12■□□□□ 0.49
Clrn1-203ENSMUST00000072551 Gm14025A2AP89 1413 aa18.1■□□□□ 0.49
Clrn1-203ENSMUST00000072551 PtprtQ99M80 1454 aa18.1■□□□□ 0.49
Clrn1-203ENSMUST00000072551 Ythdc2B2RR83 1445 aaKnown RBP18.08■□□□□ 0.49
Clrn1-203ENSMUST00000072551 Dnajc5P60904 198 aa18.08■□□□□ 0.48
Clrn1-203ENSMUST00000072551 BlmO88700 1416 aa18.07■□□□□ 0.48
Clrn1-203ENSMUST00000072551 Rrbp1Q99PL5 1605 aaKnown RBP18.06■□□□□ 0.48
Clrn1-203ENSMUST00000072551 Ap3b1Q9Z1T1 1105 aa18.06■□□□□ 0.48
Clrn1-203ENSMUST00000072551 Aebp1Q640N1 1128 aa18.05■□□□□ 0.48
Clrn1-203ENSMUST00000072551 Arhgef5E9Q7D5 1581 aa18.04■□□□□ 0.48
Clrn1-203ENSMUST00000072551 Jph4Q80WT0 628 aa18.04■□□□□ 0.48
Clrn1-203ENSMUST00000072551 Cul7Q8VE73 1689 aa18.01■□□□□ 0.47
Clrn1-203ENSMUST00000072551 Adgrl3Q80TS3 1537 aa18.01■□□□□ 0.47
Clrn1-203ENSMUST00000072551 Mroh2aD3Z750 1679 aa18.01■□□□□ 0.47
Clrn1-203ENSMUST00000072551 Rapgef6Q5NCJ1 1609 aa18.01■□□□□ 0.47
Clrn1-203ENSMUST00000072551 Arhgap31A6X8Z5 1425 aa17.98■□□□□ 0.47
Clrn1-203ENSMUST00000072551 Gm156Q58A37 223 aa17.97■□□□□ 0.47
Clrn1-203ENSMUST00000072551 Ccdc141E9Q8Q6 1531 aa17.96■□□□□ 0.47
Clrn1-203ENSMUST00000072551 Tiam1Q60610 1591 aa17.95■□□□□ 0.46
Clrn1-203ENSMUST00000072551 Kif27Q7M6Z4 1394 aa17.95■□□□□ 0.46
Clrn1-203ENSMUST00000072551 Peg3Q3URU2 1571 aa17.94■□□□□ 0.46
Clrn1-203ENSMUST00000072551 Kdm5bQ80Y84 1544 aa17.93■□□□□ 0.46
Clrn1-203ENSMUST00000072551 Fkbp15Q6P9Q6 1216 aaKnown RBP17.93■□□□□ 0.46
Clrn1-203ENSMUST00000072551 Gcc2Q8CHG3 1679 aa17.93■□□□□ 0.46
Clrn1-203ENSMUST00000072551 Arhgef11Q68FM7 1552 aa17.93■□□□□ 0.46
Clrn1-203ENSMUST00000072551 Naip1Q9QWK5 1403 aa17.92■□□□□ 0.46
Clrn1-203ENSMUST00000072551 Pprc1Q6NZN1 1644 aa17.92■□□□□ 0.46
Clrn1-203ENSMUST00000072551 AI481877A2ALV5 1481 aa17.91■□□□□ 0.46
Clrn1-203ENSMUST00000072551 CntlnA2AM05 1397 aa17.91■□□□□ 0.46
Clrn1-203ENSMUST00000072551 NhsB1AV60 1647 aa17.91■□□□□ 0.46
Clrn1-203ENSMUST00000072551 Ak9G3UYQ4 1894 aa17.9■□□□□ 0.46
Clrn1-203ENSMUST00000072551 Gm1043A0A140LJC2 1431 aa17.9■□□□□ 0.46
Clrn1-203ENSMUST00000072551 Setbp1Q9Z180 1582 aa17.89■□□□□ 0.46
Clrn1-203ENSMUST00000072551 Cdc42bpaQ3UU96 1719 aa17.87■□□□□ 0.45
Clrn1-203ENSMUST00000072551 Znf608Q56A10 1511 aa17.86■□□□□ 0.45
Clrn1-203ENSMUST00000072551 Ncoa3O09000 1398 aa17.85■□□□□ 0.45
Clrn1-203ENSMUST00000072551 Ncoa2Q61026 1462 aa17.84■□□□□ 0.45
Clrn1-203ENSMUST00000072551 Lrrc9Q8CDN9 1456 aa17.84■□□□□ 0.45
Clrn1-203ENSMUST00000072551 Plekhg3Q4VAC9 1341 aa17.84■□□□□ 0.45
Clrn1-203ENSMUST00000072551 Prex2Q3LAC4 1598 aa17.83■□□□□ 0.45
Clrn1-203ENSMUST00000072551 Mug1P28665 1476 aa17.82■□□□□ 0.44
Clrn1-203ENSMUST00000072551 Magi1Q6RHR9 1471 aa17.82■□□□□ 0.44
Clrn1-203ENSMUST00000072551 Lmod2Q3UHZ5 550 aa17.8■□□□□ 0.44
Clrn1-203ENSMUST00000072551 Kiaa1210E9Q0C6 1637 aa17.8■□□□□ 0.44
Clrn1-203ENSMUST00000072551 Kiaa1551Q5DTW7 1521 aa17.79■□□□□ 0.44
Clrn1-203ENSMUST00000072551 Fancd2Q80V62 1450 aa17.79■□□□□ 0.44
Clrn1-203ENSMUST00000072551 Ifnlr1Q8CGK5 535 aa17.79■□□□□ 0.44
Clrn1-203ENSMUST00000072551 NexmifQ5DTT1 1515 aa17.77■□□□□ 0.44
Clrn1-203ENSMUST00000072551 Wdr7Q920I9 1489 aa17.76■□□□□ 0.43
Clrn1-203ENSMUST00000072551 Igf1rQ60751 1373 aa17.76■□□□□ 0.43
Clrn1-203ENSMUST00000072551 Abca8bQ8K440 1620 aa17.76■□□□□ 0.43
Clrn1-203ENSMUST00000072551 Fam208aQ69ZR9 1610 aaKnown RBP17.74■□□□□ 0.43
Clrn1-203ENSMUST00000072551 Atp10dQ8K2X1 1416 aa17.74■□□□□ 0.43
Clrn1-203ENSMUST00000072551 Mapkbp1Q6NS57 1503 aa17.73■□□□□ 0.43
Clrn1-203ENSMUST00000072551 Lmtk2Q3TYD6 1471 aa17.69■□□□□ 0.42
Clrn1-203ENSMUST00000072551 Arid3cA6PWV5 409 aa17.68■□□□□ 0.42
Clrn1-203ENSMUST00000072551 Fam163aQ8CAA5 168 aa17.68■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 45.1 ms