RNA–Protein interactions for RNA: ENSMUST00000063905.11

Clip1-202, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Clip1, Length 4,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-202ENSMUST00000063905 Urb2E9Q7L1 1524 aaKnown RBP16.58■□□□□ 0.24
Clip1-202ENSMUST00000063905 Cux1P53564 1515 aa16.52■□□□□ 0.23
Clip1-202ENSMUST00000063905 Ankrd26Q811D2 1581 aa16.51■□□□□ 0.23
Clip1-202ENSMUST00000063905 Arhgef5E9Q7D5 1581 aa16.49■□□□□ 0.23
Clip1-202ENSMUST00000063905 Disp1Q3TDN0 1521 aa16.49■□□□□ 0.23
Clip1-202ENSMUST00000063905 Grin2aP35436 1464 aa16.47■□□□□ 0.23
Clip1-202ENSMUST00000063905 Lmod2Q3UHZ5 550 aa16.47■□□□□ 0.23
Clip1-202ENSMUST00000063905 Pla2r1Q62028 1487 aa16.47■□□□□ 0.23
Clip1-202ENSMUST00000063905 Magi3Q9EQJ9 1476 aa16.46■□□□□ 0.23
Clip1-202ENSMUST00000063905 BlmO88700 1416 aa16.46■□□□□ 0.23
Clip1-202ENSMUST00000063905 Fyco1Q8VDC1 1437 aa16.46■□□□□ 0.23
Clip1-202ENSMUST00000063905 Ift140E9PY46 1464 aa16.45■□□□□ 0.22
Clip1-202ENSMUST00000063905 EprsQ8CGC7 1512 aaKnown RBP16.45■□□□□ 0.22
Clip1-202ENSMUST00000063905 Aebp1Q640N1 1128 aa16.43■□□□□ 0.22
Clip1-202ENSMUST00000063905 Lrriq1Q0P5X1 1673 aa16.43■□□□□ 0.22
Clip1-202ENSMUST00000063905 Polr1aO35134 1717 aaKnown RBP16.43■□□□□ 0.22
Clip1-202ENSMUST00000063905 Rpap1Q80TE0 1409 aa16.42■□□□□ 0.22
Clip1-202ENSMUST00000063905 Erich3F6QRE9 1637 aa16.42■□□□□ 0.22
Clip1-202ENSMUST00000063905 Pcgf6Q99NA9 353 aa16.41■□□□□ 0.22
Clip1-202ENSMUST00000063905 Pcf11G3X9Z4 1553 aa16.41■□□□□ 0.22
Clip1-202ENSMUST00000063905 Naip1Q9QWK5 1403 aa16.41■□□□□ 0.22
Clip1-202ENSMUST00000063905 NefmP08553 848 aa16.39■□□□□ 0.21
Clip1-202ENSMUST00000063905 CntlnA2AM05 1397 aa16.39■□□□□ 0.21
Clip1-202ENSMUST00000063905 Tiam1Q60610 1591 aa16.39■□□□□ 0.21
Clip1-202ENSMUST00000063905 CadpsQ80TJ1 1355 aa16.38■□□□□ 0.21
Clip1-202ENSMUST00000063905 CenpbP27790 599 aa16.38■□□□□ 0.21
Clip1-202ENSMUST00000063905 Gm7298A0A0N4SVU1 1476 aa16.35■□□□□ 0.21
Clip1-202ENSMUST00000063905 Nup160Q9Z0W3 1402 aaKnown RBP16.35■□□□□ 0.21
Clip1-202ENSMUST00000063905 Lmo7E9PYF4 1699 aaKnown RBP16.33■□□□□ 0.21
Clip1-202ENSMUST00000063905 Pelp1Q9DBD5 1123 aaKnown RBP16.33■□□□□ 0.2
Clip1-202ENSMUST00000063905 Arhgap27A2AB59 869 aa16.32■□□□□ 0.2
Clip1-202ENSMUST00000063905 Slx4Q6P1D7 1565 aa16.32■□□□□ 0.2
Clip1-202ENSMUST00000063905 Amer1Q7TS75 1132 aa16.31■□□□□ 0.2
Clip1-202ENSMUST00000063905 Cc2d2bA0A286YDU8 1405 aa16.3■□□□□ 0.2
Clip1-202ENSMUST00000063905 WizO88286 1684 aaKnown RBP16.3■□□□□ 0.2
Clip1-202ENSMUST00000063905 PxdnQ3UQ28 1475 aa16.28■□□□□ 0.2
Clip1-202ENSMUST00000063905 Setd1bQ8CFT2 1985 aa16.27■□□□□ 0.2
Clip1-202ENSMUST00000063905 Adamts12Q811B3 1600 aa16.26■□□□□ 0.19
Clip1-202ENSMUST00000063905 Kif27Q7M6Z4 1394 aa16.26■□□□□ 0.19
Clip1-202ENSMUST00000063905 Pbrm1Q8BSQ9 1634 aaKnown RBP16.26■□□□□ 0.19
Clip1-202ENSMUST00000063905 Gpatch8A2A6A1 1505 aa16.25■□□□□ 0.19
Clip1-202ENSMUST00000063905 TchhA0A0B4J1F9 1599 aa16.25■□□□□ 0.19
Clip1-202ENSMUST00000063905 Ncapd3Q6ZQK0 1506 aa16.25■□□□□ 0.19
Clip1-202ENSMUST00000063905 Soga1E1U8D0 1418 aa16.24■□□□□ 0.19
Clip1-202ENSMUST00000063905 WrnO09053 1401 aa16.23■□□□□ 0.19
Clip1-202ENSMUST00000063905 Fam50aQ9WV03 339 aaKnown RBP16.23■□□□□ 0.19
Clip1-202ENSMUST00000063905 Abca5Q8K448 1642 aa16.23■□□□□ 0.19
Clip1-202ENSMUST00000063905 Gm1043A0A140LJC2 1431 aa16.2■□□□□ 0.18
Clip1-202ENSMUST00000063905 Rusc2Q80U22 1514 aa16.18■□□□□ 0.18
Clip1-202ENSMUST00000063905 Abca16E9PWJ7 1678 aa16.18■□□□□ 0.18
Clip1-202ENSMUST00000063905 Peg3Q3URU2 1571 aa16.16■□□□□ 0.18
Clip1-202ENSMUST00000063905 Eif4g3Q80XI3 1579 aaKnown RBP16.15■□□□□ 0.18
Clip1-202ENSMUST00000063905 Abcc2Q8VI47 1543 aa16.11■□□□□ 0.17
Clip1-202ENSMUST00000063905 Ccnb3Q810T2 1396 aa16.11■□□□□ 0.17
Clip1-202ENSMUST00000063905 Shroom2A2ALU4 1481 aa16.11■□□□□ 0.17
Clip1-202ENSMUST00000063905 Myt1Q8CFC2 1127 aa16.1■□□□□ 0.17
Clip1-202ENSMUST00000063905 AknaQ80VW7 1404 aa16.1■□□□□ 0.17
Clip1-202ENSMUST00000063905 Fkbp15Q6P9Q6 1216 aaKnown RBP16.1■□□□□ 0.17
Clip1-202ENSMUST00000063905 3425401B19RikD3Z1D3 1412 aa16.09■□□□□ 0.17
Clip1-202ENSMUST00000063905 Fgd6Q69ZL1 1399 aa16.06■□□□□ 0.16
Clip1-202ENSMUST00000063905 Eid3Q3V124 375 aa16.05■□□□□ 0.16
Clip1-202ENSMUST00000063905 Arhgap31A6X8Z5 1425 aa16.05■□□□□ 0.16
Clip1-202ENSMUST00000063905 BC005561E9Q5E2 1589 aa16.04■□□□□ 0.16
Clip1-202ENSMUST00000063905 Neo1P97798 1493 aa16.04■□□□□ 0.16
Clip1-202ENSMUST00000063905 Chic2Q9D9G3 165 aa16.03■□□□□ 0.16
Clip1-202ENSMUST00000063905 NexmifQ5DTT1 1515 aa16.03■□□□□ 0.16
Clip1-202ENSMUST00000063905 Jph4Q80WT0 628 aa16.02■□□□□ 0.16
Clip1-202ENSMUST00000063905 Mug1P28665 1476 aa16.02■□□□□ 0.15
Clip1-202ENSMUST00000063905 Ncoa3O09000 1398 aa16.01■□□□□ 0.15
Clip1-202ENSMUST00000063905 TonslQ6NZL6 1363 aa16.01■□□□□ 0.15
Clip1-202ENSMUST00000063905 Ube2uB1AUC4 352 aa16.01■□□□□ 0.15
Clip1-202ENSMUST00000063905 Rapgef6Q5NCJ1 1609 aa16■□□□□ 0.15
Clip1-202ENSMUST00000063905 Lmtk2Q3TYD6 1471 aa16■□□□□ 0.15
Clip1-202ENSMUST00000063905 Supt5hO55201 1082 aaKnown RBP15.99■□□□□ 0.15
Clip1-202ENSMUST00000063905 Map3k4O08648 1597 aa15.98■□□□□ 0.15
Clip1-202ENSMUST00000063905 Mia2Q91ZV0 1396 aa15.97■□□□□ 0.15
Clip1-202ENSMUST00000063905 Dnmt1P13864 1620 aaKnown RBP15.96■□□□□ 0.15
Clip1-202ENSMUST00000063905 A2mQ6GQT1 1474 aa15.96■□□□□ 0.15
Clip1-202ENSMUST00000063905 Kdm5bQ80Y84 1544 aa15.95■□□□□ 0.14
Clip1-202ENSMUST00000063905 Ncoa2Q61026 1462 aa15.95■□□□□ 0.14
Clip1-202ENSMUST00000063905 Ccdc141E9Q8Q6 1531 aa15.95■□□□□ 0.14
Clip1-202ENSMUST00000063905 Naip2Q9QUK4 1447 aa15.93■□□□□ 0.14
Clip1-202ENSMUST00000063905 Cdk11bP24788 784 aaKnown RBP15.93■□□□□ 0.14
Clip1-202ENSMUST00000063905 Magi1Q6RHR9 1471 aa15.92■□□□□ 0.14
Clip1-202ENSMUST00000063905 Fhad1A6PWD2 1420 aa15.92■□□□□ 0.14
Clip1-202ENSMUST00000063905 Dhx57Q6P5D3 1388 aaKnown RBP15.92■□□□□ 0.14
Clip1-202ENSMUST00000063905 Arhgef11Q68FM7 1552 aa15.91■□□□□ 0.14
Clip1-202ENSMUST00000063905 Gm14025A2AP89 1413 aa15.9■□□□□ 0.14
Clip1-202ENSMUST00000063905 Arhgef12Q8R4H2 1543 aaKnown RBP15.9■□□□□ 0.14
Clip1-202ENSMUST00000063905 Fam163aQ8CAA5 168 aa15.9■□□□□ 0.14
Clip1-202ENSMUST00000063905 Cabp1Q9JLK7 227 aa15.9■□□□□ 0.14
Clip1-202ENSMUST00000063905 Ccer2J3QPU5 274 aa15.88■□□□□ 0.13
Clip1-202ENSMUST00000063905 Gcc2Q8CHG3 1679 aa15.88■□□□□ 0.13
Clip1-202ENSMUST00000063905 Vps8Q0P5W1 1427 aa15.88■□□□□ 0.13
Clip1-202ENSMUST00000063905 Ifnlr1Q8CGK5 535 aa15.86■□□□□ 0.13
Clip1-202ENSMUST00000063905 NclP09405 707 aaKnown RBP15.85■□□□□ 0.13
Clip1-202ENSMUST00000063905 UacaQ8CGB3 1411 aa15.85■□□□□ 0.13
Clip1-202ENSMUST00000063905 Mtus2Q3UHD3 1353 aa15.84■□□□□ 0.13
Clip1-202ENSMUST00000063905 Mroh2aD3Z750 1679 aa15.84■□□□□ 0.13
Clip1-202ENSMUST00000063905 Arhgef40Q3UPH7 1517 aa15.84■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms