RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Mroh2bQ7M6Y6 1581 aa23.26■■□□□ 1.31
Ckap4-201ENSMUST00000053871 Map3k1P53349 1493 aa23.25■■□□□ 1.31
Ckap4-201ENSMUST00000053871 Mapk8ip2Q9ERE9 830 aa23.25■■□□□ 1.31
Ckap4-201ENSMUST00000053871 Naip1Q9QWK5 1403 aa23.22■■□□□ 1.31
Ckap4-201ENSMUST00000053871 Phldb1Q6PDH0 1371 aaKnown RBP23.2■■□□□ 1.31
Ckap4-201ENSMUST00000053871 Tiam1Q60610 1591 aa23.18■■□□□ 1.3
Ckap4-201ENSMUST00000053871 Ankrd26Q811D2 1581 aa23.14■■□□□ 1.3
Ckap4-201ENSMUST00000053871 Pcf11G3X9Z4 1553 aa23.1■■□□□ 1.29
Ckap4-201ENSMUST00000053871 LrpprcQ6PB66 1392 aaKnown RBP23.1■■□□□ 1.29
Ckap4-201ENSMUST00000053871 Ube2uB1AUC4 352 aa23.1■■□□□ 1.29
Ckap4-201ENSMUST00000053871 Slx4Q6P1D7 1565 aa23.09■■□□□ 1.29
Ckap4-201ENSMUST00000053871 1700123L14RikQ3V2K7 440 aa23.09■■□□□ 1.29
Ckap4-201ENSMUST00000053871 NclP09405 707 aaKnown RBP23.08■■□□□ 1.29
Ckap4-201ENSMUST00000053871 Kdm5bQ80Y84 1544 aa23.07■■□□□ 1.28
Ckap4-201ENSMUST00000053871 Cux1P53564 1515 aa23.06■■□□□ 1.28
Ckap4-201ENSMUST00000053871 Carmil1Q6EDY6 1374 aa23.05■■□□□ 1.28
Ckap4-201ENSMUST00000053871 Gm38655A0A286YDK6 273 aa23.03■■□□□ 1.28
Ckap4-201ENSMUST00000053871 Duox2A2AQ99 1517 aa23.03■■□□□ 1.28
Ckap4-201ENSMUST00000053871 Efcab5A0JP43 1406 aa23.01■■□□□ 1.27
Ckap4-201ENSMUST00000053871 Aebp1Q640N1 1128 aa23■■□□□ 1.27
Ckap4-201ENSMUST00000053871 Erich3F6QRE9 1637 aa22.98■■□□□ 1.27
Ckap4-201ENSMUST00000053871 CntlnA2AM05 1397 aa22.98■■□□□ 1.27
Ckap4-201ENSMUST00000053871 PogzQ8BZH4 1409 aaKnown RBP22.98■■□□□ 1.27
Ckap4-201ENSMUST00000053871 Hspa5P20029 655 aaKnown RBP22.96■■□□□ 1.27
Ckap4-201ENSMUST00000053871 Chic2Q9D9G3 165 aa22.95■■□□□ 1.27
Ckap4-201ENSMUST00000053871 Rad54l2Q99NG0 1466 aa22.95■■□□□ 1.26
Ckap4-201ENSMUST00000053871 3425401B19RikD3Z1D3 1412 aa22.93■■□□□ 1.26
Ckap4-201ENSMUST00000053871 Dhx29Q6PGC1 1365 aaKnown RBP22.92■■□□□ 1.26
Ckap4-201ENSMUST00000053871 Thoc2B1AZI6 1594 aaKnown RBP22.89■■□□□ 1.25
Ckap4-201ENSMUST00000053871 Fyco1Q8VDC1 1437 aa22.87■■□□□ 1.25
Ckap4-201ENSMUST00000053871 Lmo7E9PYF4 1699 aaKnown RBP22.87■■□□□ 1.25
Ckap4-201ENSMUST00000053871 TchhA0A0B4J1F9 1599 aa22.84■■□□□ 1.25
Ckap4-201ENSMUST00000053871 Urb2E9Q7L1 1524 aaKnown RBP22.83■■□□□ 1.25
Ckap4-201ENSMUST00000053871 Samd9lQ69Z37 1561 aa22.83■■□□□ 1.25
Ckap4-201ENSMUST00000053871 SynmQ70IV5 1561 aa22.79■■□□□ 1.24
Ckap4-201ENSMUST00000053871 Mia2Q91ZV0 1396 aa22.74■■□□□ 1.23
Ckap4-201ENSMUST00000053871 Gm1043A0A140LJC2 1431 aa22.74■■□□□ 1.23
Ckap4-201ENSMUST00000053871 Gm7298A0A0N4SVU1 1476 aa22.73■■□□□ 1.23
Ckap4-201ENSMUST00000053871 Ccnb3Q810T2 1396 aa22.72■■□□□ 1.23
Ckap4-201ENSMUST00000053871 Fhad1A6PWD2 1420 aa22.71■■□□□ 1.23
Ckap4-201ENSMUST00000053871 Hnrnpul2Q00PI9 745 aaKnown RBP22.71■■□□□ 1.23
Ckap4-201ENSMUST00000053871 Ccer2J3QPU5 274 aa22.71■■□□□ 1.23
Ckap4-201ENSMUST00000053871 Fam135aQ6NS59 1506 aa22.7■■□□□ 1.22
Ckap4-201ENSMUST00000053871 Sin3aQ60520 1274 aaKnown RBP22.69■■□□□ 1.22
Ckap4-201ENSMUST00000053871 Aplp2Q06335 707 aa22.68■■□□□ 1.22
Ckap4-201ENSMUST00000053871 Rpap1Q80TE0 1409 aa22.67■■□□□ 1.22
Ckap4-201ENSMUST00000053871 Slc24a1Q91WD8 1130 aa22.66■■□□□ 1.22
Ckap4-201ENSMUST00000053871 Naip2Q9QUK4 1447 aa22.66■■□□□ 1.22
Ckap4-201ENSMUST00000053871 Kif27Q7M6Z4 1394 aa22.65■■□□□ 1.22
Ckap4-201ENSMUST00000053871 A2mQ6GQT1 1474 aa22.64■■□□□ 1.22
Ckap4-201ENSMUST00000053871 EprsQ8CGC7 1512 aaKnown RBP22.64■■□□□ 1.21
Ckap4-201ENSMUST00000053871 Vps8Q0P5W1 1427 aa22.64■■□□□ 1.21
Ckap4-201ENSMUST00000053871 Polr1aO35134 1717 aaKnown RBP22.62■■□□□ 1.21
Ckap4-201ENSMUST00000053871 SafbD3YXK2 937 aaKnown RBP22.61■■□□□ 1.21
Ckap4-201ENSMUST00000053871 Crocc2F6XLV1 1638 aa22.6■■□□□ 1.21
Ckap4-201ENSMUST00000053871 CenpbP27790 599 aa22.59■■□□□ 1.21
Ckap4-201ENSMUST00000053871 CadpsQ80TJ1 1355 aa22.59■■□□□ 1.21
Ckap4-201ENSMUST00000053871 Peg3Q3URU2 1571 aa22.59■■□□□ 1.21
Ckap4-201ENSMUST00000053871 Ankrd36D3Z4K0 1415 aa22.57■■□□□ 1.2
Ckap4-201ENSMUST00000053871 Dnajc5bQ9CQ94 199 aa22.57■■□□□ 1.2
Ckap4-201ENSMUST00000053871 Gm13697A2AK42 830 aa22.57■■□□□ 1.2
Ckap4-201ENSMUST00000053871 Pla2r1Q62028 1487 aa22.56■■□□□ 1.2
Ckap4-201ENSMUST00000053871 UacaQ8CGB3 1411 aa22.55■■□□□ 1.2
Ckap4-201ENSMUST00000053871 Gpatch8A2A6A1 1505 aa22.55■■□□□ 1.2
Ckap4-201ENSMUST00000053871 Kif21aQ9QXL2 1672 aa22.54■■□□□ 1.2
Ckap4-201ENSMUST00000053871 Cabp1Q9JLK7 227 aa22.53■■□□□ 1.2
Ckap4-201ENSMUST00000053871 Plb1Q3TTY0 1478 aa22.5■■□□□ 1.19
Ckap4-201ENSMUST00000053871 Zfp644E9QA22 1323 aa22.49■■□□□ 1.19
Ckap4-201ENSMUST00000053871 Mphosph9A6H5Y1 991 aa22.49■■□□□ 1.19
Ckap4-201ENSMUST00000053871 Tnnt3Q9QZ47 272 aa22.49■■□□□ 1.19
Ckap4-201ENSMUST00000053871 Grin2aP35436 1464 aa22.47■■□□□ 1.19
Ckap4-201ENSMUST00000053871 Magi3Q9EQJ9 1476 aa22.47■■□□□ 1.19
Ckap4-201ENSMUST00000053871 Arhgap27A2AB59 869 aa22.46■■□□□ 1.19
Ckap4-201ENSMUST00000053871 Mrc2Q64449 1479 aa22.46■■□□□ 1.19
Ckap4-201ENSMUST00000053871 NexmifQ5DTT1 1515 aa22.45■■□□□ 1.18
Ckap4-201ENSMUST00000053871 Stra8P70278 393 aa22.44■■□□□ 1.18
Ckap4-201ENSMUST00000053871 BC005561E9Q5E2 1589 aa22.43■■□□□ 1.18
Ckap4-201ENSMUST00000053871 Dennd4bQ3U1Y4 1499 aa22.43■■□□□ 1.18
Ckap4-201ENSMUST00000053871 WrnO09053 1401 aa22.42■■□□□ 1.18
Ckap4-201ENSMUST00000053871 WizO88286 1684 aaKnown RBP22.42■■□□□ 1.18
Ckap4-201ENSMUST00000053871 Znf710Q3U288 666 aa22.4■■□□□ 1.18
Ckap4-201ENSMUST00000053871 Naip5Q9R016 1403 aa22.39■■□□□ 1.17
Ckap4-201ENSMUST00000053871 PxdnQ3UQ28 1475 aa22.38■■□□□ 1.17
Ckap4-201ENSMUST00000053871 Lmtk2Q3TYD6 1471 aa22.37■■□□□ 1.17
Ckap4-201ENSMUST00000053871 Pkd2O35245 966 aa22.37■■□□□ 1.17
Ckap4-201ENSMUST00000053871 Disp1Q3TDN0 1521 aa22.37■■□□□ 1.17
Ckap4-201ENSMUST00000053871 Abca5Q8K448 1642 aa22.36■■□□□ 1.17
Ckap4-201ENSMUST00000053871 Ncoa2Q61026 1462 aa22.35■■□□□ 1.17
Ckap4-201ENSMUST00000053871 Fkbp15Q6P9Q6 1216 aaKnown RBP22.35■■□□□ 1.17
Ckap4-201ENSMUST00000053871 Ncoa3O09000 1398 aa22.29■■□□□ 1.16
Ckap4-201ENSMUST00000053871 Usp47Q8BY87 1376 aa22.29■■□□□ 1.16
Ckap4-201ENSMUST00000053871 Soga1E1U8D0 1418 aa22.29■■□□□ 1.16
Ckap4-201ENSMUST00000053871 Zbtb7cQ8VCZ7 619 aa22.28■■□□□ 1.16
Ckap4-201ENSMUST00000053871 Abcc5Q9R1X5 1436 aa22.27■■□□□ 1.16
Ckap4-201ENSMUST00000053871 Smg6P61406 1418 aaKnown RBP22.27■■□□□ 1.16
Ckap4-201ENSMUST00000053871 Eif5bQ05D44 1216 aaKnown RBP22.27■■□□□ 1.16
Ckap4-201ENSMUST00000053871 Mtus2Q3UHD3 1353 aa22.27■■□□□ 1.16
Ckap4-201ENSMUST00000053871 Plekhh2Q8C115 1491 aa22.26■■□□□ 1.15
Ckap4-201ENSMUST00000053871 Mug1P28665 1476 aa22.26■■□□□ 1.15
Ckap4-201ENSMUST00000053871 Ift140E9PY46 1464 aa22.24■■□□□ 1.15
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms