RNA–Protein interactions for RNA: ENSMUST00000052708.6

Ckap2l-201, Transcript of Cytoskeleton-associated protein 2-like, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap2l, Length 3,137 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2l-201ENSMUST00000052708 Cux1P53564 1515 aa14.39□□□□□ -0.11
Ckap2l-201ENSMUST00000052708 Adamts12Q811B3 1600 aa14.38□□□□□ -0.11
Ckap2l-201ENSMUST00000052708 Abca16E9PWJ7 1678 aa14.38□□□□□ -0.11
Ckap2l-201ENSMUST00000052708 Carmil1Q6EDY6 1374 aa14.37□□□□□ -0.11
Ckap2l-201ENSMUST00000052708 Lmo7E9PYF4 1699 aaKnown RBP14.35□□□□□ -0.11
Ckap2l-201ENSMUST00000052708 Clip1Q922J3 1391 aa14.35□□□□□ -0.11
Ckap2l-201ENSMUST00000052708 WizO88286 1684 aaKnown RBP14.35□□□□□ -0.11
Ckap2l-201ENSMUST00000052708 Abca5Q8K448 1642 aa14.34□□□□□ -0.11
Ckap2l-201ENSMUST00000052708 EprsQ8CGC7 1512 aaKnown RBP14.33□□□□□ -0.12
Ckap2l-201ENSMUST00000052708 Polr1aO35134 1717 aaKnown RBP14.33□□□□□ -0.12
Ckap2l-201ENSMUST00000052708 Arap1Q4LDD4 1452 aa14.3□□□□□ -0.12
Ckap2l-201ENSMUST00000052708 Abcc2Q8VI47 1543 aa14.29□□□□□ -0.12
Ckap2l-201ENSMUST00000052708 Cc2d2bA0A286YDU8 1405 aa14.29□□□□□ -0.12
Ckap2l-201ENSMUST00000052708 Myt1lP97500 1187 aa14.29□□□□□ -0.12
Ckap2l-201ENSMUST00000052708 Pcf11G3X9Z4 1553 aa14.28□□□□□ -0.12
Ckap2l-201ENSMUST00000052708 PxdnQ3UQ28 1475 aa14.27□□□□□ -0.12
Ckap2l-201ENSMUST00000052708 TchhA0A0B4J1F9 1599 aa14.27□□□□□ -0.12
Ckap2l-201ENSMUST00000052708 Acin1Q9JIX8 1338 aaKnown RBP14.27□□□□□ -0.13
Ckap2l-201ENSMUST00000052708 Arhgef5E9Q7D5 1581 aa14.25□□□□□ -0.13
Ckap2l-201ENSMUST00000052708 Zeb1Q64318 1117 aa14.25□□□□□ -0.13
Ckap2l-201ENSMUST00000052708 Eea1Q8BL66 1411 aa14.23□□□□□ -0.13
Ckap2l-201ENSMUST00000052708 Fyco1Q8VDC1 1437 aa14.23□□□□□ -0.13
Ckap2l-201ENSMUST00000052708 CadpsQ80TJ1 1355 aa14.22□□□□□ -0.13
Ckap2l-201ENSMUST00000052708 Zcchc11B2RX14 1644 aaKnown RBP14.21□□□□□ -0.13
Ckap2l-201ENSMUST00000052708 Gm7298A0A0N4SVU1 1476 aa14.21□□□□□ -0.13
Ckap2l-201ENSMUST00000052708 Rpap1Q80TE0 1409 aa14.21□□□□□ -0.14
Ckap2l-201ENSMUST00000052708 Dnmt1P13864 1620 aaKnown RBP14.21□□□□□ -0.14
Ckap2l-201ENSMUST00000052708 BC005561E9Q5E2 1589 aa14.2□□□□□ -0.14
Ckap2l-201ENSMUST00000052708 Map3k4O08648 1597 aa14.2□□□□□ -0.14
Ckap2l-201ENSMUST00000052708 Soga1E1U8D0 1418 aa14.19□□□□□ -0.14
Ckap2l-201ENSMUST00000052708 Peg3Q3URU2 1571 aa14.18□□□□□ -0.14
Ckap2l-201ENSMUST00000052708 Slx4Q6P1D7 1565 aa14.18□□□□□ -0.14
Ckap2l-201ENSMUST00000052708 Setd5Q5XJV7 1441 aa14.18□□□□□ -0.14
Ckap2l-201ENSMUST00000052708 Tiam1Q60610 1591 aa14.17□□□□□ -0.14
Ckap2l-201ENSMUST00000052708 Ehmt2Q9Z148 1263 aaKnown RBP14.14□□□□□ -0.15
Ckap2l-201ENSMUST00000052708 BlmO88700 1416 aa14.13□□□□□ -0.15
Ckap2l-201ENSMUST00000052708 Shroom2A2ALU4 1481 aa14.11□□□□□ -0.15
Ckap2l-201ENSMUST00000052708 Naip1Q9QWK5 1403 aa14.09□□□□□ -0.15
Ckap2l-201ENSMUST00000052708 Chd1P40201 1711 aa14.08□□□□□ -0.15
Ckap2l-201ENSMUST00000052708 Gm1043A0A140LJC2 1431 aa14.05□□□□□ -0.16
Ckap2l-201ENSMUST00000052708 CntlnA2AM05 1397 aa14.03□□□□□ -0.16
Ckap2l-201ENSMUST00000052708 Aebp1Q640N1 1128 aa14.03□□□□□ -0.16
Ckap2l-201ENSMUST00000052708 Fgd6Q69ZL1 1399 aa14.02□□□□□ -0.16
Ckap2l-201ENSMUST00000052708 Rapgef6Q5NCJ1 1609 aa14.02□□□□□ -0.16
Ckap2l-201ENSMUST00000052708 Neo1P97798 1493 aa14.01□□□□□ -0.17
Ckap2l-201ENSMUST00000052708 Ap3b1Q9Z1T1 1105 aa14.01□□□□□ -0.17
Ckap2l-201ENSMUST00000052708 Mroh2aD3Z750 1679 aa14□□□□□ -0.17
Ckap2l-201ENSMUST00000052708 WrnO09053 1401 aa14□□□□□ -0.17
Ckap2l-201ENSMUST00000052708 Arhgef12Q8R4H2 1543 aaKnown RBP14□□□□□ -0.17
Ckap2l-201ENSMUST00000052708 Rrbp1Q99PL5 1605 aaKnown RBP13.99□□□□□ -0.17
Ckap2l-201ENSMUST00000052708 Arhgap27A2AB59 869 aa13.99□□□□□ -0.17
Ckap2l-201ENSMUST00000052708 Arhgef11Q68FM7 1552 aa13.98□□□□□ -0.17
Ckap2l-201ENSMUST00000052708 Pcgf6Q99NA9 353 aa13.98□□□□□ -0.17
Ckap2l-201ENSMUST00000052708 Plekhg3Q4VAC9 1341 aa13.98□□□□□ -0.17
Ckap2l-201ENSMUST00000052708 Cul7Q8VE73 1689 aa13.98□□□□□ -0.17
Ckap2l-201ENSMUST00000052708 Abcc1O35379 1528 aa13.97□□□□□ -0.17
Ckap2l-201ENSMUST00000052708 Cdc42bpaQ3UU96 1719 aa13.97□□□□□ -0.17
Ckap2l-201ENSMUST00000052708 Gcc2Q8CHG3 1679 aa13.94□□□□□ -0.18
Ckap2l-201ENSMUST00000052708 Lmtk2Q3TYD6 1471 aa13.93□□□□□ -0.18
Ckap2l-201ENSMUST00000052708 AknaQ80VW7 1404 aa13.92□□□□□ -0.18
Ckap2l-201ENSMUST00000052708 Kif27Q7M6Z4 1394 aa13.92□□□□□ -0.18
Ckap2l-201ENSMUST00000052708 Kiaa1551Q5DTW7 1521 aa13.9□□□□□ -0.18
Ckap2l-201ENSMUST00000052708 Ccdc141E9Q8Q6 1531 aa13.9□□□□□ -0.18
Ckap2l-201ENSMUST00000052708 NexmifQ5DTT1 1515 aa13.9□□□□□ -0.18
Ckap2l-201ENSMUST00000052708 Ncapd3Q6ZQK0 1506 aa13.89□□□□□ -0.19
Ckap2l-201ENSMUST00000052708 Ncoa3O09000 1398 aa13.89□□□□□ -0.19
Ckap2l-201ENSMUST00000052708 Arhgap31A6X8Z5 1425 aa13.89□□□□□ -0.19
Ckap2l-201ENSMUST00000052708 Mug1P28665 1476 aa13.87□□□□□ -0.19
Ckap2l-201ENSMUST00000052708 NhsB1AV60 1647 aa13.87□□□□□ -0.19
Ckap2l-201ENSMUST00000052708 Gm14025A2AP89 1413 aa13.86□□□□□ -0.19
Ckap2l-201ENSMUST00000052708 3425401B19RikD3Z1D3 1412 aa13.85□□□□□ -0.19
Ckap2l-201ENSMUST00000052708 Kdm5bQ80Y84 1544 aa13.85□□□□□ -0.19
Ckap2l-201ENSMUST00000052708 Prex2Q3LAC4 1598 aa13.84□□□□□ -0.19
Ckap2l-201ENSMUST00000052708 Kiaa1210E9Q0C6 1637 aa13.84□□□□□ -0.19
Ckap2l-201ENSMUST00000052708 Jph4Q80WT0 628 aa13.84□□□□□ -0.19
Ckap2l-201ENSMUST00000052708 Ncoa2Q61026 1462 aa13.83□□□□□ -0.2
Ckap2l-201ENSMUST00000052708 Magi1Q6RHR9 1471 aa13.82□□□□□ -0.2
Ckap2l-201ENSMUST00000052708 PtprtQ99M80 1454 aa13.82□□□□□ -0.2
Ckap2l-201ENSMUST00000052708 Mapkbp1Q6NS57 1503 aa13.82□□□□□ -0.2
Ckap2l-201ENSMUST00000052708 Fam208aQ69ZR9 1610 aaKnown RBP13.82□□□□□ -0.2
Ckap2l-201ENSMUST00000052708 Cep170Q6A065 1588 aa13.81□□□□□ -0.2
Ckap2l-201ENSMUST00000052708 Lmod2Q3UHZ5 550 aa13.8□□□□□ -0.2
Ckap2l-201ENSMUST00000052708 Gapvd1Q6PAR5 1458 aa13.8□□□□□ -0.2
Ckap2l-201ENSMUST00000052708 UbtfP25976 765 aaKnown RBP13.79□□□□□ -0.2
Ckap2l-201ENSMUST00000052708 Fancd2Q80V62 1450 aa13.78□□□□□ -0.2
Ckap2l-201ENSMUST00000052708 Kdm6bQ5NCY0 1641 aa13.78□□□□□ -0.2
Ckap2l-201ENSMUST00000052708 Adcy10Q8C0T9 1614 aa13.78□□□□□ -0.2
Ckap2l-201ENSMUST00000052708 Ythdc2B2RR83 1445 aaKnown RBP13.77□□□□□ -0.2
Ckap2l-201ENSMUST00000052708 Ccnb3Q810T2 1396 aa13.76□□□□□ -0.21
Ckap2l-201ENSMUST00000052708 Arhgef40Q3UPH7 1517 aa13.76□□□□□ -0.21
Ckap2l-201ENSMUST00000052708 Abca8bQ8K440 1620 aa13.76□□□□□ -0.21
Ckap2l-201ENSMUST00000052708 Pabpn1Q8CCS6 302 aaKnown RBP13.74□□□□□ -0.21
Ckap2l-201ENSMUST00000052708 A2mQ6GQT1 1474 aa13.74□□□□□ -0.21
Ckap2l-201ENSMUST00000052708 Rnf17Q99MV7 1640 aa13.72□□□□□ -0.21
Ckap2l-201ENSMUST00000052708 Mier1Q5UAK0 511 aa13.72□□□□□ -0.21
Ckap2l-201ENSMUST00000052708 Znf608Q56A10 1511 aa13.72□□□□□ -0.21
Ckap2l-201ENSMUST00000052708 Lrrc9Q8CDN9 1456 aa13.72□□□□□ -0.21
Ckap2l-201ENSMUST00000052708 Wdr7Q920I9 1489 aa13.72□□□□□ -0.21
Ckap2l-201ENSMUST00000052708 Fam163aQ8CAA5 168 aa13.71□□□□□ -0.21
Ckap2l-201ENSMUST00000052708 Pdcd11Q6NS46 1862 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms