RNA–Protein interactions for RNA: ENSMUST00000033689.2

Cdx4-201, Transcript of Homeobox protein CDX-4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx4, Length 1,963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4-201ENSMUST00000033689 Pbrm1Q8BSQ9 1634 aaKnown RBP22.23■■□□□ 1.15
Cdx4-201ENSMUST00000033689 Nup160Q9Z0W3 1402 aaKnown RBP22.23■■□□□ 1.15
Cdx4-201ENSMUST00000033689 Cux1P53564 1515 aa22.21■■□□□ 1.15
Cdx4-201ENSMUST00000033689 Erich3F6QRE9 1637 aa22.2■■□□□ 1.14
Cdx4-201ENSMUST00000033689 Setd5Q5XJV7 1441 aa22.19■■□□□ 1.14
Cdx4-201ENSMUST00000033689 Arap1Q4LDD4 1452 aa22.18■■□□□ 1.14
Cdx4-201ENSMUST00000033689 Polr1aO35134 1717 aaKnown RBP22.17■■□□□ 1.14
Cdx4-201ENSMUST00000033689 EprsQ8CGC7 1512 aaKnown RBP22.16■■□□□ 1.14
Cdx4-201ENSMUST00000033689 Rpap1Q80TE0 1409 aa22.15■■□□□ 1.14
Cdx4-201ENSMUST00000033689 Eif4g3Q80XI3 1579 aaKnown RBP22.13■■□□□ 1.13
Cdx4-201ENSMUST00000033689 Arhgef5E9Q7D5 1581 aa22.11■■□□□ 1.13
Cdx4-201ENSMUST00000033689 Fyco1Q8VDC1 1437 aa22.11■■□□□ 1.13
Cdx4-201ENSMUST00000033689 Cc2d2bA0A286YDU8 1405 aa22.1■■□□□ 1.13
Cdx4-201ENSMUST00000033689 Adamts12Q811B3 1600 aa22.08■■□□□ 1.13
Cdx4-201ENSMUST00000033689 Lmo7E9PYF4 1699 aaKnown RBP22.08■■□□□ 1.13
Cdx4-201ENSMUST00000033689 Rusc2Q80U22 1514 aa22.06■■□□□ 1.12
Cdx4-201ENSMUST00000033689 CadpsQ80TJ1 1355 aa22.05■■□□□ 1.12
Cdx4-201ENSMUST00000033689 Acin1Q9JIX8 1338 aaKnown RBP22.03■■□□□ 1.12
Cdx4-201ENSMUST00000033689 Pcf11G3X9Z4 1553 aa22.03■■□□□ 1.12
Cdx4-201ENSMUST00000033689 WizO88286 1684 aaKnown RBP22.03■■□□□ 1.12
Cdx4-201ENSMUST00000033689 Gm7298A0A0N4SVU1 1476 aa22■■□□□ 1.11
Cdx4-201ENSMUST00000033689 Abca5Q8K448 1642 aa22■■□□□ 1.11
Cdx4-201ENSMUST00000033689 Ap3b1Q9Z1T1 1105 aa21.98■■□□□ 1.11
Cdx4-201ENSMUST00000033689 TchhA0A0B4J1F9 1599 aa21.98■■□□□ 1.11
Cdx4-201ENSMUST00000033689 Abca16E9PWJ7 1678 aa21.97■■□□□ 1.11
Cdx4-201ENSMUST00000033689 Tiam1Q60610 1591 aa21.97■■□□□ 1.11
Cdx4-201ENSMUST00000033689 PxdnQ3UQ28 1475 aa21.97■■□□□ 1.11
Cdx4-201ENSMUST00000033689 Soga1E1U8D0 1418 aa21.95■■□□□ 1.1
Cdx4-201ENSMUST00000033689 Plekhg3Q4VAC9 1341 aa21.95■■□□□ 1.1
Cdx4-201ENSMUST00000033689 Naip1Q9QWK5 1403 aa21.94■■□□□ 1.1
Cdx4-201ENSMUST00000033689 CntlnA2AM05 1397 aa21.93■■□□□ 1.1
Cdx4-201ENSMUST00000033689 Aebp1Q640N1 1128 aa21.92■■□□□ 1.1
Cdx4-201ENSMUST00000033689 BlmO88700 1416 aa21.9■■□□□ 1.1
Cdx4-201ENSMUST00000033689 Abcc2Q8VI47 1543 aa21.9■■□□□ 1.1
Cdx4-201ENSMUST00000033689 Slx4Q6P1D7 1565 aa21.88■■□□□ 1.09
Cdx4-201ENSMUST00000033689 Peg3Q3URU2 1571 aa21.87■■□□□ 1.09
Cdx4-201ENSMUST00000033689 UbtfP25976 765 aaKnown RBP21.83■■□□□ 1.08
Cdx4-201ENSMUST00000033689 Rpgrip1Q9EPQ2 1331 aa21.82■■□□□ 1.08
Cdx4-201ENSMUST00000033689 Arhgap27A2AB59 869 aa21.78■■□□□ 1.08
Cdx4-201ENSMUST00000033689 Shroom2A2ALU4 1481 aa21.78■■□□□ 1.08
Cdx4-201ENSMUST00000033689 Gm1043A0A140LJC2 1431 aa21.77■■□□□ 1.08
Cdx4-201ENSMUST00000033689 Map3k4O08648 1597 aa21.77■■□□□ 1.08
Cdx4-201ENSMUST00000033689 WrnO09053 1401 aa21.75■■□□□ 1.07
Cdx4-201ENSMUST00000033689 Dnmt1P13864 1620 aaKnown RBP21.74■■□□□ 1.07
Cdx4-201ENSMUST00000033689 Fgd6Q69ZL1 1399 aa21.72■■□□□ 1.07
Cdx4-201ENSMUST00000033689 Mier1Q5UAK0 511 aa21.72■■□□□ 1.07
Cdx4-201ENSMUST00000033689 Kif27Q7M6Z4 1394 aa21.71■■□□□ 1.07
Cdx4-201ENSMUST00000033689 BC005561E9Q5E2 1589 aa21.67■■□□□ 1.06
Cdx4-201ENSMUST00000033689 Ncapd3Q6ZQK0 1506 aa21.66■■□□□ 1.06
Cdx4-201ENSMUST00000033689 Lmod2Q3UHZ5 550 aa21.66■■□□□ 1.06
Cdx4-201ENSMUST00000033689 Rapgef6Q5NCJ1 1609 aa21.61■■□□□ 1.05
Cdx4-201ENSMUST00000033689 Neo1P97798 1493 aa21.61■■□□□ 1.05
Cdx4-201ENSMUST00000033689 Zcchc11B2RX14 1644 aaKnown RBP21.59■■□□□ 1.05
Cdx4-201ENSMUST00000033689 Lmtk2Q3TYD6 1471 aa21.57■■□□□ 1.04
Cdx4-201ENSMUST00000033689 AknaQ80VW7 1404 aa21.56■■□□□ 1.04
Cdx4-201ENSMUST00000033689 Arhgef12Q8R4H2 1543 aaKnown RBP21.54■■□□□ 1.04
Cdx4-201ENSMUST00000033689 Arhgap31A6X8Z5 1425 aa21.54■■□□□ 1.04
Cdx4-201ENSMUST00000033689 Jph4Q80WT0 628 aa21.53■■□□□ 1.04
Cdx4-201ENSMUST00000033689 Ncoa3O09000 1398 aa21.52■■□□□ 1.04
Cdx4-201ENSMUST00000033689 Arhgef11Q68FM7 1552 aa21.52■■□□□ 1.03
Cdx4-201ENSMUST00000033689 Mug1P28665 1476 aa21.51■■□□□ 1.03
Cdx4-201ENSMUST00000033689 3425401B19RikD3Z1D3 1412 aa21.51■■□□□ 1.03
Cdx4-201ENSMUST00000033689 NexmifQ5DTT1 1515 aa21.49■■□□□ 1.03
Cdx4-201ENSMUST00000033689 Rrbp1Q99PL5 1605 aaKnown RBP21.49■■□□□ 1.03
Cdx4-201ENSMUST00000033689 Ncoa2Q61026 1462 aa21.48■■□□□ 1.03
Cdx4-201ENSMUST00000033689 Ccdc141E9Q8Q6 1531 aa21.48■■□□□ 1.03
Cdx4-201ENSMUST00000033689 Abcc1O35379 1528 aa21.48■■□□□ 1.03
Cdx4-201ENSMUST00000033689 Ccnb3Q810T2 1396 aa21.47■■□□□ 1.03
Cdx4-201ENSMUST00000033689 Gm14025A2AP89 1413 aa21.46■■□□□ 1.03
Cdx4-201ENSMUST00000033689 Mroh2aD3Z750 1679 aa21.44■■□□□ 1.02
Cdx4-201ENSMUST00000033689 Gcc2Q8CHG3 1679 aa21.44■■□□□ 1.02
Cdx4-201ENSMUST00000033689 Kiaa1551Q5DTW7 1521 aa21.44■■□□□ 1.02
Cdx4-201ENSMUST00000033689 Chd1P40201 1711 aa21.43■■□□□ 1.02
Cdx4-201ENSMUST00000033689 Cdc42bpaQ3UU96 1719 aa21.42■■□□□ 1.02
Cdx4-201ENSMUST00000033689 Magi1Q6RHR9 1471 aa21.42■■□□□ 1.02
Cdx4-201ENSMUST00000033689 Fam163aQ8CAA5 168 aa21.39■■□□□ 1.02
Cdx4-201ENSMUST00000033689 Kdm5bQ80Y84 1544 aa21.38■■□□□ 1.01
Cdx4-201ENSMUST00000033689 Dhx57Q6P5D3 1388 aaKnown RBP21.38■■□□□ 1.01
Cdx4-201ENSMUST00000033689 Mapkbp1Q6NS57 1503 aa21.37■■□□□ 1.01
Cdx4-201ENSMUST00000033689 NefmP08553 848 aa21.36■■□□□ 1.01
Cdx4-201ENSMUST00000033689 A2mQ6GQT1 1474 aa21.34■■□□□ 1.01
Cdx4-201ENSMUST00000033689 Prex2Q3LAC4 1598 aa21.31■■□□□ 1
Cdx4-201ENSMUST00000033689 Fancd2Q80V62 1450 aa21.31■■□□□ 1
Cdx4-201ENSMUST00000033689 Naip2Q9QUK4 1447 aa21.3■■□□□ 1
Cdx4-201ENSMUST00000033689 Fkbp15Q6P9Q6 1216 aaKnown RBP21.28■■□□□ 1
Cdx4-201ENSMUST00000033689 Pabpn1Q8CCS6 302 aaKnown RBP21.27■□□□□ 0.99
Cdx4-201ENSMUST00000033689 Cul7Q8VE73 1689 aa21.26■□□□□ 0.99
Cdx4-201ENSMUST00000033689 Arhgef40Q3UPH7 1517 aa21.26■□□□□ 0.99
Cdx4-201ENSMUST00000033689 Ythdc2B2RR83 1445 aaKnown RBP21.25■□□□□ 0.99
Cdx4-201ENSMUST00000033689 Adcy10Q8C0T9 1614 aa21.25■□□□□ 0.99
Cdx4-201ENSMUST00000033689 NhsB1AV60 1647 aa21.24■□□□□ 0.99
Cdx4-201ENSMUST00000033689 Kiaa1210E9Q0C6 1637 aa21.23■□□□□ 0.99
Cdx4-201ENSMUST00000033689 Mia2Q91ZV0 1396 aa21.23■□□□□ 0.99
Cdx4-201ENSMUST00000033689 Fhad1A6PWD2 1420 aa21.23■□□□□ 0.99
Cdx4-201ENSMUST00000033689 Pelp1Q9DBD5 1123 aaKnown RBP21.23■□□□□ 0.99
Cdx4-201ENSMUST00000033689 Fam50aQ9WV03 339 aaKnown RBP21.23■□□□□ 0.99
Cdx4-201ENSMUST00000033689 Fam208aQ69ZR9 1610 aaKnown RBP21.22■□□□□ 0.99
Cdx4-201ENSMUST00000033689 Gapvd1Q6PAR5 1458 aa21.22■□□□□ 0.99
Cdx4-201ENSMUST00000033689 Mlh3A0A1Y7VMP7 1443 aa21.2■□□□□ 0.98
Cdx4-201ENSMUST00000033689 PtprtQ99M80 1454 aa21.19■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 52.9 ms